BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0054.p (360 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776541.1| 6-phosphogluconolactonase [Herbaspirillum se... 455 e-126 ref|YP_004750899.1| hypothetical protein CFU_0238 [Collimonas fu... 447 e-123 ref|ZP_08404702.1| 6-phosphogluconolactonase [Hylemonella gracil... 374 e-101 ref|ZP_02884517.1| 6-phosphogluconolactonase [Burkholderia grami... 369 e-100 ref|YP_004154210.1| 6-phosphogluconolactonase [Variovorax parado... 367 1e-99 >ref|YP_003776541.1| 6-phosphogluconolactonase [Herbaspirillum seropedicae SmR1] gb|ADJ64633.1| 6-phosphogluconolactonase protein [Herbaspirillum seropedicae SmR1] Length = 365 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 229/340 (67%), Positives = 272/340 (80%), Gaps = 3/340 (0%) Query: 23 ANAATMVYVSNADSKDISVLQLNKDGSLDLVEQVPVGGTVMPLAFSPDHRRLYASLRSQP 82 A AAT+ YVS+ADS+DI VL+LN DGS++L+++V G TVMPLA SPD + LYASLR +P Sbjct: 27 AGAATIAYVSHADSQDIYVLRLNNDGSVNLIDKVDTGSTVMPLAISPDRKYLYASLRREP 86 Query: 83 YSVTTFAVDQQSGKLKALSTAPLADNMANLATDKTGRFLFAASYTGHKISVNPISSAGLV 142 Y+V ++A+D SGKLKALS APLADNMAN+ATD++GR+L AASY G+KISVN I S G V Sbjct: 87 YAVASYAIDPASGKLKALSKAPLADNMANIATDRSGRYLLAASYFGNKISVNAIGSDGAV 146 Query: 143 QE-PATVINTGKNAHAVGSDPKNRFVFASNLGSDVILQFKFDAATGKLTPNTPPSVAAKA 201 Q P VI TGKNAH+V DP N FVFASNLGSDVILQ++FD A+G +TPNTPPSVA+KA Sbjct: 147 QTPPLAVIPTGKNAHSVQVDPANAFVFASNLGSDVILQYRFDPASGAVTPNTPPSVASKA 206 Query: 202 SAGPRHFVFHPNLRYVFATNELDGTVSTYSYDAAQGTLKLKGSVSAVPPGFKGGAP-AAA 260 AGPRHFVF P+ R+++ NELD TVSTY+YD GTL L GS SA+P GF+ AAA Sbjct: 207 GAGPRHFVFSPDQRFLYCANELDATVSTYAYDRQAGTLTLLGSDSALPEGFQSSEQLAAA 266 Query: 261 DIHLTPDGRFLYASERTSSTLTAYRVNAGTGELTTIGNFATETQPRGFNIDPQGKYLLAA 320 D+HLTPDGRFLYA+ERTS+TLT YRV+ +G+LT I N TETQPR FNIDPQG+YLLA Sbjct: 267 DLHLTPDGRFLYATERTSNTLTGYRVDRASGKLTRILNIPTETQPRAFNIDPQGRYLLAV 326 Query: 321 GQKSNGLTSYAINPKTGALTPLRHYGLGSNPNWVEIIALP 360 GQK+ GLTSYAI+ +G LTPL Y LG NPNWVEII LP Sbjct: 327 GQKA-GLTSYAIDAASGTLTPLFRYTLGRNPNWVEIIDLP 365 >ref|YP_004750899.1| hypothetical protein CFU_0238 [Collimonas fungivorans Ter331] gb|AEK60076.1| hypothetical protein CFU_0238 [Collimonas fungivorans Ter331] Length = 362 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 220/340 (64%), Positives = 267/340 (78%), Gaps = 2/340 (0%) Query: 23 ANAATMVYVSNADSKDISVLQLNK-DGSLDLVEQVPVGGTVMPLAFSPDHRRLYASLRSQ 81 A+A TMVYVSNADS+DI V++L++ DGS LVE+V GGTVMPLA SPD R LYASLRS Sbjct: 23 ASAKTMVYVSNADSRDIYVMELSQSDGSASLVEKVATGGTVMPLAVSPDRRFLYASLRSL 82 Query: 82 PYSVTTFAVDQQSGKLKALSTAPLADNMANLATDKTGRFLFAASYTGHKISVNPISSAGL 141 PYSV++FA+D+QSGKL LST PLADNMANLATDKTGRFL AASYTG+KIS+NPI+ G Sbjct: 83 PYSVSSFAIDRQSGKLSLLSTVPLADNMANLATDKTGRFLLAASYTGNKISINPIADKGD 142 Query: 142 V-QEPATVINTGKNAHAVGSDPKNRFVFASNLGSDVILQFKFDAATGKLTPNTPPSVAAK 200 V +P VI T + AHA+ +DP N ++FAS+LG DVILQ++FDA++G++TPN PP V + Sbjct: 143 VGAQPLAVIPTREKAHAIATDPANTYLFASSLGGDVILQYRFDASSGQVTPNVPPYVETR 202 Query: 201 ASAGPRHFVFHPNLRYVFATNELDGTVSTYSYDAAQGTLKLKGSVSAVPPGFKGGAPAAA 260 AGPRHFVF R+V+ TNELDG+++TY YDA G L L+ SVS P F+G A A A Sbjct: 203 QGAGPRHFVFDRRARFVYGTNELDGSLNTYRYDAGSGVLTLQASVSLRPKDFQGAALAPA 262 Query: 261 DIHLTPDGRFLYASERTSSTLTAYRVNAGTGELTTIGNFATETQPRGFNIDPQGKYLLAA 320 D+HLTPDGRFLYASERTSSTLT + V+ G LT IG F TETQPRGFNIDP G+YLLA Sbjct: 263 DLHLTPDGRFLYASERTSSTLTGFAVDPDNGALTLIGTFPTETQPRGFNIDPGGRYLLAV 322 Query: 321 GQKSNGLTSYAINPKTGALTPLRHYGLGSNPNWVEIIALP 360 GQKSN ++SYAI+ +GAL L Y +G+NPNW+EI+ LP Sbjct: 323 GQKSNRMSSYAIDQNSGALRLLHQYDMGANPNWIEIVDLP 362 >ref|ZP_08404702.1| 6-phosphogluconolactonase [Hylemonella gracilis ATCC 19624] gb|EGI78140.1| 6-phosphogluconolactonase [Hylemonella gracilis ATCC 19624] Length = 360 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 246/349 (70%), Gaps = 6/349 (1%) Query: 13 VMLGCALGIGANAATMVYVSNADSKDISVLQLNK-DGSLDLVEQVPVGGTVMPLAFSPDH 71 ++ GCA A A YVSNADS++ISVL+LNK +G+L ++ V VGGT MPLA SPD Sbjct: 17 MLQGCATSTTATA----YVSNADSREISVLELNKREGTLRSLQTVSVGGTAMPLALSPDQ 72 Query: 72 RRLYASLRSQPYSVTTFAVDQQSGKLKALSTAPLADNMANLATDKTGRFLFAASYTGHKI 131 ++LY +LRS+PY+ F +D +G+L L +A L D+MAN+ATD++GR+LFAASY GH+ Sbjct: 73 KKLYVALRSEPYTAAAFTIDATTGQLSPLGSAALPDSMANIATDRSGRWLFAASYGGHRA 132 Query: 132 SVNPISSAGLVQEPATVINTGKNAHAVGSDPKNRFVFASNLGSDVILQFKFDAATGKLTP 191 SV+PI +AG ++ GKNAHA D NR V+ ++LG+D +LQ++FDAATG+LTP Sbjct: 133 SVSPIDAAGKPAAAVQIVPNGKNAHAAIPDAANRNVYITSLGTDQVLQWRFDAATGQLTP 192 Query: 192 NTPPSVAAKASAGPRHFVFHPNLRYVFATNELDGTVSTYSYDAAQGTLKLKGSVSAVPPG 251 N PP++AA+ +GPRH VFHPN R+ + ELD +V DAA+G L K S +P G Sbjct: 193 NDPPAMAARPGSGPRHLVFHPNGRHAYLLGELDASVELLEVDAAKGQLSRKQHWSTLPAG 252 Query: 252 FKGGAPAAADIHLTPDGRFLYASERTSSTLTAYRVNAGTGELTTIGNFATETQPRGFNID 311 F G P AAD+HLTPDGRFLY SERTSSTL +RV+AG+G LT +G+ ATE QPRGF ID Sbjct: 253 FT-GKPWAADLHLTPDGRFLYTSERTSSTLAIWRVDAGSGALTLVGHQATEQQPRGFQID 311 Query: 312 PQGKYLLAAGQKSNGLTSYAINPKTGALTPLRHYGLGSNPNWVEIIALP 360 G++L+AAGQ S+ +T Y I+P G L+ + +G PNW+EI+ P Sbjct: 312 SSGQWLMAAGQLSHSVTLYRIDPDNGRLSQAQRVPVGKGPNWIEIVDRP 360 >ref|ZP_02884517.1| 6-phosphogluconolactonase [Burkholderia graminis C4D1M] gb|EDT10055.1| 6-phosphogluconolactonase [Burkholderia graminis C4D1M] Length = 365 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/358 (50%), Positives = 248/358 (69%), Gaps = 1/358 (0%) Query: 1 MEFATYARRAGAVMLGCALGIGANAATMVYVSNADSKDISVLQLNK-DGSLDLVEQVPVG 59 M + +R ++ G A+ +A+T YVSNADS+DISV L+K +G+L VE V VG Sbjct: 1 MSVSAVSRAVAILLAGVAMSATVHASTYAYVSNADSQDISVFSLDKSNGALKPVETVSVG 60 Query: 60 GTVMPLAFSPDHRRLYASLRSQPYSVTTFAVDQQSGKLKALSTAPLADNMANLATDKTGR 119 GTVMP+AFSP+H RLYA LRS+P+ V +FAV G+L L APLA++MA ++TD +GR Sbjct: 61 GTVMPMAFSPNHLRLYAGLRSKPFRVVSFAVSPLDGRLTELGKAPLAESMAYVSTDASGR 120 Query: 120 FLFAASYTGHKISVNPISSAGLVQEPATVINTGKNAHAVGSDPKNRFVFASNLGSDVILQ 179 +LF+ASY G+ ++VN I + G+ + ++ TG AHA+ + P NR+VFAS LG+D L+ Sbjct: 121 YLFSASYGGNLLAVNGIGANGVAGDVQQIVKTGPMAHAIRNAPDNRYVFASVLGADAWLR 180 Query: 180 FKFDAATGKLTPNTPPSVAAKASAGPRHFVFHPNLRYVFATNELDGTVSTYSYDAAQGTL 239 KFDAA G LT + P+ + A +GPRHFVF P+ R+V+ +ELDG + ++D + + Sbjct: 181 LKFDAANGALTQDAAPAYSLPAKSGPRHFVFSPDERFVYLIDELDGKLHVLAFDKQRDAV 240 Query: 240 KLKGSVSAVPPGFKGGAPAAADIHLTPDGRFLYASERTSSTLTAYRVNAGTGELTTIGNF 299 K +VS +PP F G P AD+H+TPDGRF+YASERTSSTL AYRV+ +G+LT IG + Sbjct: 241 KPVQTVSILPPNFSGDKPWGADVHITPDGRFVYASERTSSTLAAYRVDRASGKLTRIGTY 300 Query: 300 ATETQPRGFNIDPQGKYLLAAGQKSNGLTSYAINPKTGALTPLRHYGLGSNPNWVEII 357 TE QPRGFNIDP G YLLA GQ S L++Y IN +TGAL+ L Y +G NW+EI+ Sbjct: 301 PTEKQPRGFNIDPSGNYLLAVGQLSTNLSAYRINRETGALSALGQYPVGKGANWIEIV 358 >ref|YP_004154210.1| 6-phosphogluconolactonase [Variovorax paradoxus EPS] gb|ADU36099.1| 6-phosphogluconolactonase [Variovorax paradoxus EPS] Length = 354 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 185/354 (52%), Positives = 249/354 (70%), Gaps = 2/354 (0%) Query: 8 RRAGAVMLGCALGIGANAATMVYVSNADSKDISVLQLNKD-GSLDLVEQVPVGGTVMPLA 66 R+ A +L A+ A+AAT VYVSNADS++ISVL L++D G+L V+ + VGGTVMP+A Sbjct: 2 RKTIASLLWLAVAGQASAATWVYVSNADSQEISVLALDRDKGTLTPVQTLAVGGTVMPMA 61 Query: 67 FSPDHRRLYASLRSQPYSVTTFAVDQQSGKLKALSTAPLADNMANLATDKTGRFLFAASY 126 S D R LYA+LRSQP+ V + ++D +GKL+ L APLAD+MAN+ D +G++LFAASY Sbjct: 62 VSHDKRVLYAALRSQPFRVASMSIDAGTGKLQKLGEAPLADSMANIDLDASGKWLFAASY 121 Query: 127 TGHKISVNPISSAGLVQEPATVINTGKNAHAVGSDPKNRFVFASNLGSDVILQFKFDAAT 186 G KISVN I G V ++ TG NAHA+ +D NR+V A++LG D I ++FDA Sbjct: 122 QGGKISVNAIGKDGTVGAIQQLVQTGPNAHAIHADAANRYVLATSLGGDNISSWRFDADK 181 Query: 187 GKLTPNTPPSVAAKASAGPRHFVFHPNLRYVFATNELDGTVSTYSYDAAQGTLKLKGSVS 246 G L+PN P A AGPRHFV+ R+V+ +ELD + +++DA +GTLKL+ S + Sbjct: 182 GLLSPNDPALTTTAAKAGPRHFVWDKAQRHVYLLDELDAALHVFAWDATRGTLKLEQSTT 241 Query: 247 AVPPGFKGGAPAAADIHLTPDGRFLYASERTSSTLTAYRVNAGTGELTTIGNFATETQPR 306 +P GF G P AAD+HLTPDGR+LYASERTSSTL+A++V+A TG+L +G TE PR Sbjct: 242 TLPTGFT-GKPWAADLHLTPDGRYLYASERTSSTLSAFKVDAATGQLQPLGQTPTEKGPR 300 Query: 307 GFNIDPQGKYLLAAGQKSNGLTSYAINPKTGALTPLRHYGLGSNPNWVEIIALP 360 GF IDP G+YL+AAGQ+S+ ++ YAI+ TGAL +G NPNW+EI+ LP Sbjct: 301 GFAIDPSGRYLIAAGQESHSISLYAIDAATGALGKPERLAVGKNPNWIEIVDLP 354