BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0051.p (556 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07673944.1| methyl-accepting chemotaxis protein I [Ralsto... 744 0.0 ref|NP_522922.1| methyl-accepting chemotaxis transducer transmem... 738 0.0 ref|YP_003910265.1| methyl-accepting chemotaxis sensory transduc... 734 0.0 ref|YP_004230814.1| methyl-accepting chemotaxis sensory transduc... 731 0.0 ref|YP_001862396.1| methyl-accepting chemotaxis sensory transduc... 729 0.0 >ref|ZP_07673944.1| methyl-accepting chemotaxis protein I [Ralstonia sp. 5_7_47FAA] gb|EFP67619.1| methyl-accepting chemotaxis protein I [Ralstonia sp. 5_7_47FAA] Length = 546 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/522 (72%), Positives = 438/522 (83%), Gaps = 1/522 (0%) Query: 1 MKISNLNIGVRLSLAFALVVALLIGTALVGIRHLDANNEKMDRIVGERYSLISISNQIKN 60 M+IS++ IGVRL AFALVVALLIGTA VGI+ LD NN KM RIV ERYSLI++SNQIKN Sbjct: 4 MRISDMKIGVRLGAAFALVVALLIGTAAVGIQRLDDNNTKMGRIVSERYSLIALSNQIKN 63 Query: 61 NGNKGNAILSNLLLTSSPERAKKYMDDYAALRKTNAEAYAKFEKMLQNEQSKQLFKQQFE 120 NG K N ILSNLLL +S ++ KYM+DYAA+R+ N +AY + EKML + SK LFK+QFE Sbjct: 64 NGYKANGILSNLLLATSADQKAKYMNDYAAIRQANGQAYGRLEKMLTTDASKALFKEQFE 123 Query: 121 SRAAYGVTVRKFFELIAENKQQEARDIYQGDMARTQAAYYVLVDKMVDYQAHEMENDVLN 180 +R+AYG +VRKFFELI NK ++AR +YQGDM+R Q YYVLVDKMVD+QA EME+DV Sbjct: 124 ARSAYGASVRKFFELIDANKPEDARVLYQGDMSRLQDQYYVLVDKMVDHQASEMEHDVGE 183 Query: 181 AAEQARNAKIQMAILSACAVLLSIVTGVFITRTITRPINRAVDLAEAVAQGNLTHHLEID 240 AA Q NAKIQM +L+ A LL+I TG FITRTIT PI+RAV LAEAVAQG+LTH LE+ Sbjct: 184 AAAQGANAKIQMIVLAVLATLLAIATGGFITRTITGPIHRAVHLAEAVAQGDLTHRLEVG 243 Query: 241 SKDEIGRLLVALKFMIENLHGIVAKVRKGTDTIAEASREVASGNMDLSTRTEQQASSLEE 300 ++DEIGRLL ALK M ENLHGIV +VR GTDTI ASREVASGN+DLS+RTEQQASSLEE Sbjct: 244 AQDEIGRLLAALKHMTENLHGIVGRVRGGTDTITRASREVASGNIDLSSRTEQQASSLEE 303 Query: 301 TASAMEQLTSAVRQNADNARQANQLASNASAVAIKGGDAVGQVVDTMTAINTSSRKIVDI 360 TA+AMEQLTS V+QNADNA++A++LASNAS VA KGGDAVG+ ++TM+ IN SSRKIVDI Sbjct: 304 TAAAMEQLTSTVKQNADNAQEASRLASNASLVAAKGGDAVGEAIETMSTINASSRKIVDI 363 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRNLAQRSAVAAKEIKTLIDHS 420 IGVID IAFQTNILALNAAVEAARAGE GRGFAVVA EVRNLAQRSA AAKEIK LI+ S Sbjct: 364 IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAAAAKEIKGLIEDS 423 Query: 421 VNQVGNGSKMVEQAGQTIQDVVNSIRHVTDIVAEISSSSQEQSAGIEQINQAITQMDQVT 480 VN VG G+ VE+AGQ I+DVV I++VT+IVAEIS+SS+EQS GIEQIN+AITQMD+VT Sbjct: 424 VNHVGTGTAKVEEAGQIIRDVVAGIQNVTNIVAEISASSREQSEGIEQINEAITQMDKVT 483 Query: 481 QENAALVEQSAAAAQALQDQTGQLTDMVSTFTLHGDQLPATA 522 QENA+LVE+SA +AQALQDQ QL +MVS F LHGD +P A Sbjct: 484 QENASLVEESATSAQALQDQADQLAEMVSAFRLHGD-MPGHA 524 >ref|NP_522922.1| methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18514.1| probable methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum GMI1000] Length = 543 Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/516 (71%), Positives = 432/516 (83%) Query: 1 MKISNLNIGVRLSLAFALVVALLIGTALVGIRHLDANNEKMDRIVGERYSLISISNQIKN 60 M+IS++ IGVRL AFALVVALLIG A VGI+ LD NN KM +IV ERYSLI++SNQIKN Sbjct: 1 MRISDMRIGVRLGAAFALVVALLIGIAAVGIQRLDDNNTKMGQIVSERYSLIALSNQIKN 60 Query: 61 NGNKGNAILSNLLLTSSPERAKKYMDDYAALRKTNAEAYAKFEKMLQNEQSKQLFKQQFE 120 NG K N ILSNLLL ++PE+ KYM DYAA+R+ NA+AY + EK+L +Q K LFK+QF+ Sbjct: 61 NGYKANGILSNLLLVTTPEQKTKYMSDYAAIRQANAQAYGRLEKLLTTDQGKALFKEQFD 120 Query: 121 SRAAYGVTVRKFFELIAENKQQEARDIYQGDMARTQAAYYVLVDKMVDYQAHEMENDVLN 180 +R+AYG +VRKFF L+ + QEAR +YQGDM+R Q YYVLVDKMVD+QA EME+DV Sbjct: 121 ARSAYGASVRKFFALVDADNVQEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEHDVSE 180 Query: 181 AAEQARNAKIQMAILSACAVLLSIVTGVFITRTITRPINRAVDLAEAVAQGNLTHHLEID 240 AA Q NAKIQM +L+ A LL+I TG FITRTITRPIN A+ LAEAVAQGNLTH LE+D Sbjct: 181 AAAQGANAKIQMIVLAVLATLLAIATGAFITRTITRPINHAMHLAEAVAQGNLTHLLEVD 240 Query: 241 SKDEIGRLLVALKFMIENLHGIVAKVRKGTDTIAEASREVASGNMDLSTRTEQQASSLEE 300 ++DEIGRLL ALK MIENLHGIV++VR GTDTI AS EVASGN+DLS+RTEQQASSLEE Sbjct: 241 TQDEIGRLLAALKHMIENLHGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEE 300 Query: 301 TASAMEQLTSAVRQNADNARQANQLASNASAVAIKGGDAVGQVVDTMTAINTSSRKIVDI 360 TA+AMEQLTS V+QNADNA++A++LASNAS VA KGGDAV + + TM+ INTSSRKIVDI Sbjct: 301 TAAAMEQLTSTVKQNADNAQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRNLAQRSAVAAKEIKTLIDHS 420 IGVIDGIAFQTNILALNAAVEAARAGE GRGFAVVA EVR+LAQRSA AAKEIK LI+ S Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDS 420 Query: 421 VNQVGNGSKMVEQAGQTIQDVVNSIRHVTDIVAEISSSSQEQSAGIEQINQAITQMDQVT 480 V V G+ VE+AGQ I+DVV I++VT+IV+EIS+SS+EQS GIEQIN+AITQMD+ T Sbjct: 421 VGHVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKAT 480 Query: 481 QENAALVEQSAAAAQALQDQTGQLTDMVSTFTLHGD 516 QENA+LVE+SA AAQALQDQ QL DMVSTF LH D Sbjct: 481 QENASLVEESATAAQALQDQANQLADMVSTFKLHAD 516 >ref|YP_003910265.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1003] gb|ADN60974.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1003] Length = 546 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/516 (74%), Positives = 450/516 (87%) Query: 1 MKISNLNIGVRLSLAFALVVALLIGTALVGIRHLDANNEKMDRIVGERYSLISISNQIKN 60 MKISNL IGVRL AFAL+VALL+GTA+VGI+HL ++N KMD IV RY+LI++SNQIK+ Sbjct: 1 MKISNLRIGVRLGSAFALMVALLVGTAVVGIQHLQSSNTKMDEIVSNRYTLIALSNQIKS 60 Query: 61 NGNKGNAILSNLLLTSSPERAKKYMDDYAALRKTNAEAYAKFEKMLQNEQSKQLFKQQFE 120 NG K N ILSNLLLT+SPE+AK+YMD+YAA+RK NA+AY + EK L ++++K LFKQQF+ Sbjct: 61 NGYKANGILSNLLLTTSPEKAKQYMDEYAAIRKANAQAYGELEKHLTSDETKALFKQQFD 120 Query: 121 SRAAYGVTVRKFFELIAENKQQEARDIYQGDMARTQAAYYVLVDKMVDYQAHEMENDVLN 180 +R+AYGV+V+ FF+L+++N+QQEARD+YQGDMAR Q AYYVLVDKMVD QA M DV + Sbjct: 121 ARSAYGVSVKSFFDLVSKNQQQEARDVYQGDMARLQDAYYVLVDKMVDVQADRMARDVAD 180 Query: 181 AAEQARNAKIQMAILSACAVLLSIVTGVFITRTITRPINRAVDLAEAVAQGNLTHHLEID 240 A +A +AK+QM +L+ A +++I TGVFITRTITRPINRAV LAEAVA G+LTH L+ID Sbjct: 181 AISEAHSAKLQMILLALLATVIAIATGVFITRTITRPINRAVVLAEAVAAGDLTHRLQID 240 Query: 241 SKDEIGRLLVALKFMIENLHGIVAKVRKGTDTIAEASREVASGNMDLSTRTEQQASSLEE 300 S DE+GRLL AL+ M NLHGIVA+VR+GTDTI++A+REVASGNMDLS+RTE QASSLEE Sbjct: 241 STDEVGRLLTALERMTSNLHGIVAQVRQGTDTISQATREVASGNMDLSSRTEHQASSLEE 300 Query: 301 TASAMEQLTSAVRQNADNARQANQLASNASAVAIKGGDAVGQVVDTMTAINTSSRKIVDI 360 TA+AMEQLTS V+QNADNAR+ANQLASNAS VA+KGG+AV QVV TM+AIN SSR+IV+I Sbjct: 301 TAAAMEQLTSTVKQNADNAREANQLASNASDVAVKGGEAVNQVVSTMSAINESSRRIVEI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRNLAQRSAVAAKEIKTLIDHS 420 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVR LAQRSAVAAKEIK LI S Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKELIADS 420 Query: 421 VNQVGNGSKMVEQAGQTIQDVVNSIRHVTDIVAEISSSSQEQSAGIEQINQAITQMDQVT 480 VNQVG G KMVEQAGQ I +VV SIRHVT+IVAEISSSS+EQS GIEQIN A+TQMD+VT Sbjct: 421 VNQVGTGGKMVEQAGQIIGEVVKSIRHVTEIVAEISSSSKEQSEGIEQINHAVTQMDKVT 480 Query: 481 QENAALVEQSAAAAQALQDQTGQLTDMVSTFTLHGD 516 QENAALVEQSAAAAQALQDQ QLT VSTF L D Sbjct: 481 QENAALVEQSAAAAQALQDQAQQLTQTVSTFKLDSD 516 >ref|YP_004230814.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1001] gb|ADX57754.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1001] Length = 546 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/537 (72%), Positives = 456/537 (84%), Gaps = 2/537 (0%) Query: 1 MKISNLNIGVRLSLAFALVVALLIGTALVGIRHLDANNEKMDRIVGERYSLISISNQIKN 60 MKISNL IGVRL AFAL+V LL+GTA+VGI HL++ N KMD IV RY+LI++SNQIK+ Sbjct: 1 MKISNLRIGVRLGSAFALMVVLLVGTAVVGIEHLESTNTKMDEIVSNRYTLIALSNQIKS 60 Query: 61 NGNKGNAILSNLLLTSSPERAKKYMDDYAALRKTNAEAYAKFEKMLQNEQSKQLFKQQFE 120 NG K N ILSNLLLT+SP+RAK+YMDDYAA+RK NA+AYA+ EK L ++++K LFKQQF+ Sbjct: 61 NGYKANGILSNLLLTTSPDRAKQYMDDYAAIRKANAQAYAELEKHLTSDETKALFKQQFD 120 Query: 121 SRAAYGVTVRKFFELIAENKQQEARDIYQGDMARTQAAYYVLVDKMVDYQAHEMENDVLN 180 +R+AYGV+V+ FF+L+++N+QQEARD+YQGDMAR Q AYYVLVDKMVD QA M +DV + Sbjct: 121 ARSAYGVSVKSFFDLVSKNQQQEARDVYQGDMARLQDAYYVLVDKMVDVQAERMAHDVAD 180 Query: 181 AAEQARNAKIQMAILSACAVLLSIVTGVFITRTITRPINRAVDLAEAVAQGNLTHHLEID 240 A +A AK+QM +L+ A +++I T +FITRTITRPINRAV LAEAVA G+LTH L+ID Sbjct: 181 AVAEAHRAKLQMILLALIATVIAIATAIFITRTITRPINRAVVLAEAVAAGDLTHQLQID 240 Query: 241 SKDEIGRLLVALKFMIENLHGIVAKVRKGTDTIAEASREVASGNMDLSTRTEQQASSLEE 300 S DE+GRLL AL+ M NLHGIVA+VR+GTDTI++A+REVASGNMDLS+RTE QASSLEE Sbjct: 241 STDEVGRLLSALERMTGNLHGIVAQVRQGTDTISQATREVASGNMDLSSRTEHQASSLEE 300 Query: 301 TASAMEQLTSAVRQNADNARQANQLASNASAVAIKGGDAVGQVVDTMTAINTSSRKIVDI 360 TA+AMEQLTS V+QNADNAR+ANQLASNAS VA+KGGDAV QVV TM+AIN SSR+IV+I Sbjct: 301 TAAAMEQLTSTVKQNADNAREANQLASNASDVAVKGGDAVNQVVSTMSAINESSRRIVEI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRNLAQRSAVAAKEIKTLIDHS 420 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVR LAQRSAVAAKEIK LI S Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRGLAQRSAVAAKEIKELIADS 420 Query: 421 VNQVGNGSKMVEQAGQTIQDVVNSIRHVTDIVAEISSSSQEQSAGIEQINQAITQMDQVT 480 VNQVG G KMVE+AGQ I +VV SIRHVT+IV EIS+SS+EQS GIEQIN A+TQMD+VT Sbjct: 421 VNQVGTGGKMVEEAGQIISEVVKSIRHVTEIVGEISASSKEQSEGIEQINHAVTQMDKVT 480 Query: 481 QENAALVEQSAAAAQALQDQTGQLTDMVSTFTL-HGDQLPATATAPGGTSRRSVDIT 536 QENAALVEQSAAAAQALQDQ QLT VSTF L HG A AP R+ D++ Sbjct: 481 QENAALVEQSAAAAQALQDQAQQLTHTVSTFKLDHGASRERRA-APDSHVHRTNDMS 536 >ref|YP_001862396.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phymatum STM815] gb|ACC75350.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phymatum STM815] Length = 549 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/550 (67%), Positives = 452/550 (82%), Gaps = 8/550 (1%) Query: 1 MKISNLNIGVRLSLAFALVVALLIGTALVGIRHLDANNEKMDRIVGERYSLISISNQIKN 60 M I+NL IG RLS AF L+VAL+IGT +VGI HL +++ +MD IVGERY+LI++SNQIKN Sbjct: 1 MWIANLRIGARLSSAFVLIVALMIGTTVVGIEHLKSSSTRMDTIVGERYALIALSNQIKN 60 Query: 61 NGNKGNAILSNLLLTSSPERAKKYMDDYAALRKTNAEAYAKFEKMLQNEQSKQLFKQQFE 120 NG + NAILSNLLL S+ +AKKYMDDYA +RKTNA+AYA+ EK+L ++ +K LFK+QF+ Sbjct: 61 NGYRANAILSNLLLVSTEAQAKKYMDDYAVIRKTNADAYARLEKLLHSDDAKALFKEQFQ 120 Query: 121 SRAAYGVTVRKFFELIAENKQQEARDIYQGDMARTQAAYYVLVDKMVDYQAHEMENDVLN 180 +R YG +VRKFF+L+ EN+QQ+ARD+Y GD+AR Q YYVLVDKMVDYQA +M+ND Sbjct: 121 ARTVYGGSVRKFFDLVKENRQQDARDLYLGDLARQQDEYYVLVDKMVDYQAAQMQNDAAR 180 Query: 181 AAEQARNAKIQMAILSACAVLLSIVTGVFITRTITRPINRAVDLAEAVAQGNLTHHLEID 240 AA++ NA++QM +LS A+L + TG ITR ITRPI+RAVDLAEAVAQG+LT LE Sbjct: 181 AADEGGNARVQMILLSIGAILAAGATGFVITRGITRPIHRAVDLAEAVAQGDLTQRLETG 240 Query: 241 SKDEIGRLLVALKFMIENLHGIVAKVRKGTDTIAEASREVASGNMDLSTRTEQQASSLEE 300 S DEIGRL ALK MIENLH IV +VR GT+TI ASREVASGNMDLS+RTEQQAS+LE+ Sbjct: 241 SNDEIGRLQHALKNMIENLHDIVVRVRAGTETITRASREVASGNMDLSSRTEQQASALEQ 300 Query: 301 TASAMEQLTSAVRQNADNARQANQLASNASAVAIKGGDAVGQVVDTMTAINTSSRKIVDI 360 TA+AMEQLTS V+QN DNA +AN++A +AS A KGG AV +VVDTM+AIN SSRKIVDI Sbjct: 301 TAAAMEQLTSTVKQNTDNALEANRVALSASETAAKGGQAVNRVVDTMSAINVSSRKIVDI 360 Query: 361 IGVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRNLAQRSAVAAKEIKTLIDHS 420 IGVI+GIAFQTNILALNAAVEAARAGEHGRGFAVVASEVR+LAQRSAVAAKEIKTLID S Sbjct: 361 IGVIEGIAFQTNILALNAAVEAARAGEHGRGFAVVASEVRSLAQRSAVAAKEIKTLIDDS 420 Query: 421 VNQVGNGSKMVEQAGQTIQDVVNSIRHVTDIVAEISSSSQEQSAGIEQINQAITQMDQVT 480 V+ V +GSK+VE+AGQ I++VV+SI HVT IV E+S+SS+EQS GIEQIN+A+TQMDQVT Sbjct: 421 VSHVDDGSKIVEEAGQIIREVVSSIAHVTAIVGEMSTSSREQSDGIEQINRAVTQMDQVT 480 Query: 481 QENAALVEQSAAAAQALQDQTGQLTDMVSTFTLH---GDQL---PATATAPGGTSRRSVD 534 QENAALVE+SAAAAQAL +Q QL+DMV+ FTL G L P+ A A G S + + Sbjct: 481 QENAALVEESAAAAQALHEQAAQLSDMVAEFTLDDAGGRDLQFQPSMARASGSPS--TAN 538 Query: 535 ITAKPSRLGA 544 + ++P LGA Sbjct: 539 VASQPLLLGA 548