BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0047.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776538.1| GntR family transcription regulator protein ... 425 e-117 ref|ZP_07265514.1| transcriptional regulator GntR [Pseudomonas s... 314 9e-84 gb|EGH27761.1| transcriptional regulator GntR [Pseudomonas syrin... 313 1e-83 gb|EGH58389.1| transcriptional regulator GntR [Pseudomonas syrin... 313 2e-83 ref|YP_004381415.1| GntR family transcriptional regulator [Pseud... 313 2e-83 >ref|YP_003776538.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64630.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 208/253 (82%), Positives = 230/253 (90%) Query: 1 MEVTETPSPLMRPRKKTQSLSQEVVGAISEMISNGAIKPGEKLPTESEIMLTQGVSRTVV 60 M+V++TP+PL+RPR+K QSLSQEVV A++ MISNG++ PG+KLPTESEIM TQGVSRTVV Sbjct: 1 MDVSDTPNPLLRPRRKPQSLSQEVVAALTAMISNGSLTPGDKLPTESEIMQTQGVSRTVV 60 Query: 61 REAISRLQAAGLVETRHGIGTFVLEAQKAGNINIDPATITTMKDLLALLELRISLETETA 120 REAISRLQAAGLVETRHGIGTFVLEA+K GNINIDPATITTM+DLLALLELRISLETETA Sbjct: 61 REAISRLQAAGLVETRHGIGTFVLEAKKGGNINIDPATITTMRDLLALLELRISLETETA 120 Query: 121 GLAAARRSDAQLLEIRQALDAFHENLKKGVDTVGPDFRFHFQIANATGNRYFIEILSHLG 180 GLAAARR++ QL EIR+ALD F N + G DTVGPDFRFHF IANATGNRYFIEI+SHLG Sbjct: 121 GLAAARRTEEQLQEIREALDLFRANQQGGGDTVGPDFRFHFAIANATGNRYFIEIISHLG 180 Query: 181 AGVIPRKRLNTAELARDPQASYLDRVQREHEDIYEAIARRDTEAARAAMRNHLTNSRERL 240 GVIPRKR+NTAELA D QASYLDRVQREHEDIYEAIAR D EAARAAMRNHLTNSRERL Sbjct: 181 MGVIPRKRINTAELAHDQQASYLDRVQREHEDIYEAIARGDAEAARAAMRNHLTNSRERL 240 Query: 241 RRAQEAAESAAGA 253 RRAQ+ AES + + Sbjct: 241 RRAQQEAESGSAS 253 >ref|ZP_07265514.1| transcriptional regulator GntR [Pseudomonas syringae pv. syringae 642] Length = 249 Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 157/245 (64%), Positives = 191/245 (77%) Query: 5 ETPSPLMRPRKKTQSLSQEVVGAISEMISNGAIKPGEKLPTESEIMLTQGVSRTVVREAI 64 E S L R R+K +SL+QE+V +SE I +G +K G+KLPTES IM QGVSRTVVREAI Sbjct: 2 ENQSALPRARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAI 61 Query: 65 SRLQAAGLVETRHGIGTFVLEAQKAGNINIDPATITTMKDLLALLELRISLETETAGLAA 124 SRLQA+GLVETRHGIGTFVL+ IDPATI T++D+LA+LELRISLE E+AGLAA Sbjct: 62 SRLQASGLVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAA 121 Query: 125 ARRSDAQLLEIRQALDAFHENLKKGVDTVGPDFRFHFQIANATGNRYFIEILSHLGAGVI 184 RRSD QL +R ALDA +E+ D V DF+FH QIA +TGNRYF +I++HLG +I Sbjct: 122 QRRSDEQLAAMRSALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSII 181 Query: 185 PRKRLNTAELARDPQASYLDRVQREHEDIYEAIARRDTEAARAAMRNHLTNSRERLRRAQ 244 PR RLN+A LA D Q +Y+DR+ REHE+I++AIAR+D++AARAAMR HLTNSRERLR A Sbjct: 182 PRTRLNSARLAHDDQQNYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAH 241 Query: 245 EAAES 249 E AES Sbjct: 242 EEAES 246 >gb|EGH27761.1| transcriptional regulator GntR [Pseudomonas syringae pv. japonica str. M301072PT] gb|EGH55764.1| transcriptional regulator GntR [Pseudomonas syringae Cit 7] gb|EGH79142.1| transcriptional regulator GntR [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 249 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 157/245 (64%), Positives = 190/245 (77%) Query: 5 ETPSPLMRPRKKTQSLSQEVVGAISEMISNGAIKPGEKLPTESEIMLTQGVSRTVVREAI 64 E S L R R+K +SL+QE+V +SE I +G +K G+KLPTES IM QGVSRTVVREAI Sbjct: 2 ENQSALPRARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAI 61 Query: 65 SRLQAAGLVETRHGIGTFVLEAQKAGNINIDPATITTMKDLLALLELRISLETETAGLAA 124 SRLQA+GLVETRHGIGTFVL+ IDPATI T++D+LA+LELRISLE E+AGLAA Sbjct: 62 SRLQASGLVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAA 121 Query: 125 ARRSDAQLLEIRQALDAFHENLKKGVDTVGPDFRFHFQIANATGNRYFIEILSHLGAGVI 184 RRSD QL +R ALDA +E+ D V DF+FH QIA +TGNRYF +I++HLG +I Sbjct: 122 QRRSDEQLAAMRSALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSII 181 Query: 185 PRKRLNTAELARDPQASYLDRVQREHEDIYEAIARRDTEAARAAMRNHLTNSRERLRRAQ 244 PR RLN+A LA D Q Y+DR+ REHE+I++AIAR+D++AARAAMR HLTNSRERLR A Sbjct: 182 PRTRLNSARLAHDDQQHYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAH 241 Query: 245 EAAES 249 E AES Sbjct: 242 EEAES 246 >gb|EGH58389.1| transcriptional regulator GntR [Pseudomonas syringae pv. maculicola str. ES4326] Length = 249 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 157/245 (64%), Positives = 190/245 (77%) Query: 5 ETPSPLMRPRKKTQSLSQEVVGAISEMISNGAIKPGEKLPTESEIMLTQGVSRTVVREAI 64 E S L R R+K +SL+QE+V +SE I +G +K G+KLPTES IM QGVSRTVVREAI Sbjct: 2 ENQSALPRARRKHRSLAQELVTELSERIRSGQLKRGDKLPTESAIMEEQGVSRTVVREAI 61 Query: 65 SRLQAAGLVETRHGIGTFVLEAQKAGNINIDPATITTMKDLLALLELRISLETETAGLAA 124 SRLQA+GLVETRHGIGTFVL+ IDPATI T++D+LA+LELRISLE E+AGLAA Sbjct: 62 SRLQASGLVETRHGIGTFVLDTPSPSGFRIDPATIVTLRDVLAILELRISLEVESAGLAA 121 Query: 125 ARRSDAQLLEIRQALDAFHENLKKGVDTVGPDFRFHFQIANATGNRYFIEILSHLGAGVI 184 RRSD QL +R ALDA +E+ D V DF+FH QIA +TGNRYF +I++HLG +I Sbjct: 122 QRRSDEQLAAMRAALDALNESAAHATDAVASDFQFHLQIALSTGNRYFTDIMTHLGTSII 181 Query: 185 PRKRLNTAELARDPQASYLDRVQREHEDIYEAIARRDTEAARAAMRNHLTNSRERLRRAQ 244 PR RLN+A LA D Q Y+DR+ REHE+I++AIAR+D++AARAAMR HLTNSRERLR A Sbjct: 182 PRTRLNSARLAHDDQQHYMDRLSREHEEIFDAIARQDSDAARAAMRLHLTNSRERLRHAH 241 Query: 245 EAAES 249 E AES Sbjct: 242 EEAES 246 >ref|YP_004381415.1| GntR family transcriptional regulator [Pseudomonas mendocina NK-01] gb|AEB59663.1| GntR family transcriptional regulator [Pseudomonas mendocina NK-01] Length = 251 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/237 (66%), Positives = 187/237 (78%) Query: 5 ETPSPLMRPRKKTQSLSQEVVGAISEMISNGAIKPGEKLPTESEIMLTQGVSRTVVREAI 64 ET + R R+K +SL+QE+V +S+ I +G IK GEKLPTES IM QGVSRTVVREA+ Sbjct: 2 ETQNAQPRARRKHRSLAQELVAELSQRIRDGHIKRGEKLPTESAIMEEQGVSRTVVREAL 61 Query: 65 SRLQAAGLVETRHGIGTFVLEAQKAGNINIDPATITTMKDLLALLELRISLETETAGLAA 124 SRLQAAGLVETRHGIGTFVL+ A IDPATI T++D+LA+LELRISLE E+AG+AA Sbjct: 62 SRLQAAGLVETRHGIGTFVLDTPSASGFRIDPATIVTLRDVLAILELRISLEVESAGMAA 121 Query: 125 ARRSDAQLLEIRQALDAFHENLKKGVDTVGPDFRFHFQIANATGNRYFIEILSHLGAGVI 184 ARRSDAQL IR+ALDA +E+ D V DF FH +IA ATGNRYF +ILSHLG +I Sbjct: 122 ARRSDAQLKAIREALDAINESAAHASDAVSSDFHFHLRIAEATGNRYFTDILSHLGTSII 181 Query: 185 PRKRLNTAELARDPQASYLDRVQREHEDIYEAIARRDTEAARAAMRNHLTNSRERLR 241 PR R+N+A LARD Q Y+ R++REHE I+EAIAR+D EAARAAMR HLTNSRERLR Sbjct: 182 PRTRVNSAGLARDDQTHYMARLEREHEQIFEAIARQDAEAARAAMRLHLTNSRERLR 238