BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0039.p (420 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776559.1| antimicrobial peptide ABC transporter permea... 592 e-167 ref|YP_002943480.1| hypothetical protein Vapar_1563 [Variovorax ... 514 e-143 ref|YP_004154039.1| hypothetical protein Varpa_1718 [Variovorax ... 513 e-143 ref|YP_003169256.1| hypothetical protein CAP2UW1_4085 [Candidatu... 504 e-141 ref|YP_998133.1| hypothetical protein Veis_3394 [Verminephrobact... 485 e-135 >ref|YP_003776559.1| antimicrobial peptide ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64651.1| ABC-type antimicrobial peptide transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 422 Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust. Identities = 325/422 (77%), Positives = 357/422 (84%), Gaps = 2/422 (0%) Query: 1 MSFLFRLAARSAWNRRYTLGLMLLAIALSSAMLLGIERVRHEVRDSFSQSVSGTDLVVGA 60 M L RLA RSAWNRR+TLGLML+AIALS+ MLLGIERVRHEVR FSQSVSGTDLVVGA Sbjct: 1 MKILLRLAMRSAWNRRFTLGLMLVAIALSTTMLLGIERVRHEVRAGFSQSVSGTDLVVGA 60 Query: 61 RTSPVQLMLYAIFRIGGATNNMGWDSAQKLAKNPAVAWTIPLSLGDSHRGFPVLATNGDY 120 RTSP+QLMLYAIFRIGGATNN+GWDSAQ LA+NPAVAWTIP+SLGDSHRGF VLATNGDY Sbjct: 61 RTSPIQLMLYAIFRIGGATNNIGWDSAQALARNPAVAWTIPISLGDSHRGFSVLATNGDY 120 Query: 121 FKHFHYGDGQPLQLGEGRVFGSVFETVLGAEVAQRLHYKLGDRIVLSHGMGSLHLTDHAD 180 F HF YG QPL+L +G VF+ VLGA+VA +LHY LGD I+LSHGMG + LT HAD Sbjct: 121 FTHFRYGSNQPLRLTQGHPMAGVFDAVLGADVAAKLHYHLGDIIILSHGMGGMGLTQHAD 180 Query: 181 KPFTVTGILARTGTPVDRTVHIGLDAMEAIHLDWEGGPPPPPPXIAPALVKKFDLTPKTV 240 KPF V GILARTGTPVDRTVHIGLD M+AIHLDWEGG P P I VKKF+LTP ++ Sbjct: 181 KPFRVVGILARTGTPVDRTVHIGLDGMQAIHLDWEGGAPLPGVHIPAEFVKKFNLTPTSI 240 Query: 241 TAVLVGLKSRATVFGVQRDIADDD--SEPLMAVLPGVALDELWQVVGIGENALLVVSGMV 298 TAVLVGLKSRA VF +QR+IA EPLMAVLPGVALD+LW VVGIGENALLVVSGMV Sbjct: 241 TAVLVGLKSRARVFALQREIASGQGYKEPLMAVLPGVALDQLWDVVGIGENALLVVSGMV 300 Query: 299 VIVGLAGLVSAILASLGERRRELAVLRSVGARPGDVFLLLALEGLAVMLAGVVLGAVLLT 358 V+VGLAGLV+AILASLGERRRELA+LRSVGARP DV LLL +EGL VMLAGV G +LL+ Sbjct: 301 VVVGLAGLVAAILASLGERRRELAILRSVGARPLDVLLLLCIEGLGVMLAGVASGLLLLS 360 Query: 359 LALFALGPFLSAQFGVTLHPALPAAGELQLLGWTVLAGFVASLLPGLRAYRLSLADGLTP 418 L ++ LGP L+ QFG+ L PA PAAGELQLL WTVLAG VASLLP LRAYRLSL+DGLTP Sbjct: 361 LLVWTLGPLLAEQFGIALQPAWPAAGELQLLLWTVLAGLVASLLPALRAYRLSLSDGLTP 420 Query: 419 RI 420 RI Sbjct: 421 RI 422 >ref|YP_002943480.1| hypothetical protein Vapar_1563 [Variovorax paradoxus S110] gb|ACS18214.1| protein of unknown function DUF214 [Variovorax paradoxus S110] Length = 420 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 260/420 (61%), Positives = 322/420 (76%) Query: 1 MSFLFRLAARSAWNRRYTLGLMLLAIALSSAMLLGIERVRHEVRDSFSQSVSGTDLVVGA 60 M LF +A RSAWNRR+TL L + +IALS+ +LLG+ER+R E+R++F+ SVSGTDL+VGA Sbjct: 1 MKALFSIAWRSAWNRRFTLALTVFSIALSTFLLLGVERIRTELRENFASSVSGTDLIVGA 60 Query: 61 RTSPVQLMLYAIFRIGGATNNMGWDSAQKLAKNPAVAWTIPLSLGDSHRGFPVLATNGDY 120 RT QL+LY++FRIG ATNN+ W S Q LA +P V W +PLSLGDSHRGF VLAT+ +Y Sbjct: 61 RTGATQLLLYSVFRIGAATNNISWKSVQALAAHPGVDWVVPLSLGDSHRGFAVLATSPEY 120 Query: 121 FKHFHYGDGQPLQLGEGRVFGSVFETVLGAEVAQRLHYKLGDRIVLSHGMGSLHLTDHAD 180 F F YG+ QPL L EG+ F ++F+ V+GAEVA +L Y +G RI L+HG G L+ ++HAD Sbjct: 121 FARFRYGNRQPLALREGKPFSALFDAVVGAEVADKLGYHVGQRITLAHGSGELNASEHAD 180 Query: 181 KPFTVTGILARTGTPVDRTVHIGLDAMEAIHLDWEGGPPPPPPXIAPALVKKFDLTPKTV 240 KPFTV G+LARTGTPVDRTVHIGL+AMEAIHL+W GG P P I V+KFDLTPK V Sbjct: 181 KPFTVVGVLARTGTPVDRTVHIGLEAMEAIHLEWVGGAPMPGVKIPAEQVRKFDLTPKNV 240 Query: 241 TAVLVGLKSRATVFGVQRDIADDDSEPLMAVLPGVALDELWQVVGIGENALLVVSGMVVI 300 TA LVGLK+R+ VFGVQR I+ EPLMA+LPGVALDELW V+GIGENALL++S +V + Sbjct: 241 TAALVGLKNRSAVFGVQRWISTYTGEPLMAILPGVALDELWSVIGIGENALLLMSALVAL 300 Query: 301 VGLAGLVSAILASLGERRRELAVLRSVGARPGDVFLLLALEGLAVMLAGVVLGAVLLTLA 360 V LAGLVS ++A L ERRRELAVLR+VGA V LLALEG V + GV G V+ L Sbjct: 301 VSLAGLVSVVMAGLNERRRELAVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVLG 360 Query: 361 LFALGPFLSAQFGVTLHPALPAAGELQLLGWTVLAGFVASLLPGLRAYRLSLADGLTPRI 420 + L P+L AQFG+TL + P E L+ ++AG++ASLLPG+RAYRLSLADGL+PRI Sbjct: 361 IALLAPWLQAQFGLTLSLSPPTLNEWLLMASLLVAGWLASLLPGIRAYRLSLADGLSPRI 420 >ref|YP_004154039.1| hypothetical protein Varpa_1718 [Variovorax paradoxus EPS] gb|ADU35928.1| protein of unknown function DUF214 [Variovorax paradoxus EPS] Length = 420 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 258/420 (61%), Positives = 322/420 (76%) Query: 1 MSFLFRLAARSAWNRRYTLGLMLLAIALSSAMLLGIERVRHEVRDSFSQSVSGTDLVVGA 60 M+ LF +A RSAWNRR+TL L + +IALS+ +LLG+ER+R E+R++F+ SVSGTDL+VGA Sbjct: 1 MNALFSIAWRSAWNRRFTLALTVFSIALSTFLLLGVERIRTELRENFASSVSGTDLIVGA 60 Query: 61 RTSPVQLMLYAIFRIGGATNNMGWDSAQKLAKNPAVAWTIPLSLGDSHRGFPVLATNGDY 120 RT QL+LY++FRIG ATNN+ W S Q LA + V W +PLSLGDSHRGF VLAT+ +Y Sbjct: 61 RTGSTQLLLYSVFRIGAATNNISWKSVQALAAHQGVDWVVPLSLGDSHRGFAVLATSPEY 120 Query: 121 FKHFHYGDGQPLQLGEGRVFGSVFETVLGAEVAQRLHYKLGDRIVLSHGMGSLHLTDHAD 180 F F YGD Q L+L EG+ F +F+ V+GAEVA +L Y +G +I L+HG G L++ +HAD Sbjct: 121 FARFRYGDKQLLKLREGKPFSELFDAVVGAEVADKLGYHVGQKITLAHGSGELNVAEHAD 180 Query: 181 KPFTVTGILARTGTPVDRTVHIGLDAMEAIHLDWEGGPPPPPPXIAPALVKKFDLTPKTV 240 KPFTV G+LARTGTPVDRTVHIGL+AMEAIHL+W GG P P I V+KFDLTPK V Sbjct: 181 KPFTVVGVLARTGTPVDRTVHIGLEAMEAIHLEWVGGAPMPGVKIPAEQVRKFDLTPKNV 240 Query: 241 TAVLVGLKSRATVFGVQRDIADDDSEPLMAVLPGVALDELWQVVGIGENALLVVSGMVVI 300 TA LVGLK+RA VFGVQR I+ + EPLMA+LPGVALDELW V+GIGENALL++S +V + Sbjct: 241 TAALVGLKNRAAVFGVQRWISTYNGEPLMAILPGVALDELWSVIGIGENALLLMSALVAL 300 Query: 301 VGLAGLVSAILASLGERRRELAVLRSVGARPGDVFLLLALEGLAVMLAGVVLGAVLLTLA 360 V LAGLVS ++A L ERRRELAVLR+VGA V LLALEG V + GV G V+ L Sbjct: 301 VSLAGLVSVVMAGLNERRRELAVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVLG 360 Query: 361 LFALGPFLSAQFGVTLHPALPAAGELQLLGWTVLAGFVASLLPGLRAYRLSLADGLTPRI 420 + L P+L +QFG+TL + P E L+ ++AG++ASLLPG+RAYRLSLADGL+PRI Sbjct: 361 IALLSPWLQSQFGLTLSLSEPTLNEWLLMASLLVAGWLASLLPGIRAYRLSLADGLSPRI 420 >ref|YP_003169256.1| hypothetical protein CAP2UW1_4085 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV37327.1| protein of unknown function DUF214 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 424 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 274/424 (64%), Positives = 326/424 (76%), Gaps = 6/424 (1%) Query: 1 MSFLFRLAARSAWNRRYTLGLMLLAIALSSAMLLGIERVRHEVRDSFSQSVSGTDLVVGA 60 M +L LA RSAWNRRY L LL+IAL++++LLG+ER+R +VR+SFSQSVSGTDLVVGA Sbjct: 1 MHYLIVLAVRSAWNRRYPLTFTLLSIALATSLLLGVERLRQDVRESFSQSVSGTDLVVGA 60 Query: 61 RTSPVQLMLYAIFRIGGATNNMGWDSAQKLAKNPAVAWTIPLSLGDSHRGFPVLATNGDY 120 R SP+QLMLYA+FRIG A NM W SAQKLA +PAVAW+IPLSLGDSHRGFPVL T+ DY Sbjct: 61 RASPIQLMLYAVFRIGEAAQNMRWTSAQKLASHPAVAWSIPLSLGDSHRGFPVLGTSVDY 120 Query: 121 FKHFHYGDGQPLQLGEGRVFGSVFETVLGAEVAQRLHYKLGDRIVLSHGMGSLHLTDHAD 180 F HF YGD QPL++ G F VF+ VLGAEVA++L Y+LG++IVL+HG L H D Sbjct: 121 FTHFRYGDRQPLRMRAGVPFAGVFDAVLGAEVARKLGYQLGEKIVLTHGSSGLEGAAHGD 180 Query: 181 KPFTVTGILARTGTPVDRTVHIGLDAMEAIHLDWEGGPPPPPPXIAPALVKKFDLTPKTV 240 KPF V GILA TGTPVDRTVHI L MEAIHLDW+GG P P I P LV+KFDLTPKT+ Sbjct: 181 KPFFVVGILAPTGTPVDRTVHITLAGMEAIHLDWQGGAPVPGFSIPPDLVRKFDLTPKTI 240 Query: 241 TAVLVGLKSRATVFGVQRDIADDDSEPLMAVLPGVALDELWQVVGIGENALLVVSGMVVI 300 TA L+GLK R VF +QR IAD E LM V+PGV LD+LW+VVG GE ALL+VS MV + Sbjct: 241 TAQLIGLKQRGDVFAMQRAIADAGDEALMGVMPGVTLDQLWEVVGQGEQALLLVSWMVAL 300 Query: 301 VGLAGLVSAILASLGERRRELAVLRSVGARPGDVFLLLALEGLAVMLAGVVLGAVLLTLA 360 VGL GLV+ ILASL RRRELA+LRSVGARP ++ LLLALEG +V + G+V+G LL+ Sbjct: 301 VGLGGLVAVILASLDARRRELAILRSVGARPRELLLLLALEGFSVTVGGIVVGVALLSAV 360 Query: 361 LFALGPFLSAQFGVTLHPALPAAGE-----LQLLGWTVLAGFVASLLPGLRAYRLSLADG 415 LF P++ A +G+ L+ L +G+ +LLGW +LAG VASLLPGLRAYRLSL DG Sbjct: 361 LFFATPWIEAHYGIALN-GLNLSGDDATSLAELLGWILLAGSVASLLPGLRAYRLSLIDG 419 Query: 416 LTPR 419 LTPR Sbjct: 420 LTPR 423 >ref|YP_998133.1| hypothetical protein Veis_3394 [Verminephrobacter eiseniae EF01-2] gb|ABM59115.1| protein of unknown function DUF214 [Verminephrobacter eiseniae EF01-2] Length = 421 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 252/418 (60%), Positives = 313/418 (74%) Query: 3 FLFRLAARSAWNRRYTLGLMLLAIALSSAMLLGIERVRHEVRDSFSQSVSGTDLVVGART 62 FL LA RSAWNRR+TL L + +IALS+ ML+G+ER+R ++RDSF+ +VSGTDL+VGART Sbjct: 4 FLLGLAWRSAWNRRFTLVLTVCSIALSTFMLIGVERIRTDLRDSFTSAVSGTDLIVGART 63 Query: 63 SPVQLMLYAIFRIGGATNNMGWDSAQKLAKNPAVAWTIPLSLGDSHRGFPVLATNGDYFK 122 +QL+LYA+F IG ATN++ W S Q L + VAW +PLSLGDSHRGFPVL T+ YF+ Sbjct: 64 GSIQLLLYAVFHIGAATNDIRWSSVQALGQQRGVAWVVPLSLGDSHRGFPVLGTSAGYFE 123 Query: 123 HFHYGDGQPLQLGEGRVFGSVFETVLGAEVAQRLHYKLGDRIVLSHGMGSLHLTDHADKP 182 H YGD Q L+L +G VF +F+ V+GAEVA RL Y+LG RI L+HG G LHL+DHADKP Sbjct: 124 HLRYGDQQSLRLEQGSVFADLFDAVIGAEVADRLGYRLGQRITLAHGSGDLHLSDHADKP 183 Query: 183 FTVTGILARTGTPVDRTVHIGLDAMEAIHLDWEGGPPPPPPXIAPALVKKFDLTPKTVTA 242 F +TGILARTGTPVDRTVHI L+AM+A+H+DW G P P I P V+ +L PK VTA Sbjct: 184 FRITGILARTGTPVDRTVHISLEAMQALHVDWFAGAPIPGGHIDPDRVRSMNLQPKAVTA 243 Query: 243 VLVGLKSRATVFGVQRDIADDDSEPLMAVLPGVALDELWQVVGIGENALLVVSGMVVIVG 302 LVGLK+RA VF VQR + +EPLM++LPGVALDELW V+G GE ALL++S +V V Sbjct: 244 ALVGLKNRAAVFSVQRQVNQFAAEPLMSILPGVALDELWDVIGTGEQALLLMSALVAAVS 303 Query: 303 LAGLVSAILASLGERRRELAVLRSVGARPGDVFLLLALEGLAVMLAGVVLGAVLLTLALF 362 +A LVS +LA L ERRRELAVLR+VGA P V LLLALEG V ++G+ +G V + AL Sbjct: 304 MAALVSVVLAGLNERRRELAVLRAVGASPHHVLLLLALEGSMVTISGITVGIVAMVGALV 363 Query: 363 ALGPFLSAQFGVTLHPALPAAGELQLLGWTVLAGFVASLLPGLRAYRLSLADGLTPRI 420 A GP+L + +G+TLH A P + LL +LAG +A LLPG RAYRL+LADGL PRI Sbjct: 364 AAGPWLQSAYGLTLHAAQPTNLQWALLAGLLLAGSLAGLLPGWRAYRLALADGLAPRI 421