BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0037.p (187 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776557.1| hypothetical protein Hsero_3167 [Herbaspiril... 171 6e-41 ref|YP_003169254.1| metal ion ABC transporter periplasmic protei... 148 4e-34 ref|ZP_01916373.1| hypothetical protein LMED105_10930 [Limnobact... 113 1e-23 ref|YP_004154041.1| ABC-type metal ion transport system, peripla... 107 8e-22 ref|YP_002943482.1| ABC-type metal ion transport system, peripla... 107 1e-21 >ref|YP_003776557.1| hypothetical protein Hsero_3167 [Herbaspirillum seropedicae SmR1] gb|ADJ64649.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 193 Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 93/157 (59%), Positives = 111/157 (70%), Gaps = 4/157 (2%) Query: 24 HEAHVHGVGKLDVVLDGQALSLHLDSPLVNLVGFEHAANSAKDKAAVQAMTRTLRGTGTG 83 H AHVHGVGKLDV L+G L+LHLD+PLVN+VGFEHAA+S+KDK V+A RTLR Sbjct: 32 HPAHVHGVGKLDVALEGNTLTLHLDTPLVNVVGFEHAASSSKDKDTVRAAARTLREVNR- 90 Query: 84 AVFVASPSAECKLSGVKLESAALDPALLGEPAAAKPAAQAGHDGHADLDADFTFRCAHPE 143 +F +A+CK + ++LESAAL PALLGE AAA A A DGHADLD DFT CA P Sbjct: 91 -IFATDAAAQCKSAEIQLESAALSPALLGEKAAAS-AQDAPKDGHADLDGDFTLVCASPG 148 Query: 144 RLQKIEVR-LFDTFKGFNSIDVQLVTGKRQGAAKLTP 179 L +++ LF F GF IDVQL T K+QGA +LTP Sbjct: 149 ALTTLDLNGLFSAFPGFQRIDVQLATPKKQGALQLTP 185 >ref|YP_003169254.1| metal ion ABC transporter periplasmic protein surface adhesin [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV37325.1| ABC-type metal ion transport system, periplasmic component/surface adhesin [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 192 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 88/189 (46%), Positives = 113/189 (59%), Gaps = 12/189 (6%) Query: 6 RHTIALVALLSSAS-LLHAHEAHVHGVGKLDVVLDGQALSLHLDSPLVNLVGFEHAANSA 64 R AL A L+ S + HA +AHVHGV +L+V +D L + L+SPL NL+GFE S Sbjct: 4 RTLSALAAALTIVSPIAHAEKAHVHGVAELNVGVDKDTLRIALESPLENLLGFERVPKSD 63 Query: 65 KDKAAVQAMTRTLRGTGTGAVFVASPSAECKLSGVKLESAALDPALLGE---------PA 115 K+ V+ M LR +F+ +P A CKL VKLESA LDPALLGE A Sbjct: 64 KELDKVRRMASQLRQADK--LFLPTPGAGCKLVNVKLESAVLDPALLGEAPVAAASPGQA 121 Query: 116 AAKPAAQAGHDGHADLDADFTFRCAHPERLQKIEVRLFDTFKGFNSIDVQLVTGKRQGAA 175 AA+ HADLD +F F+CA P LQ +EV+LFD F G+ I Q+VT KRQ AA Sbjct: 122 AARTPQPGAKPAHADLDGEFVFQCAQPAALQGLEVKLFDAFPGYRQIRAQVVTAKRQSAA 181 Query: 176 KLTPAANSI 184 +L+P AN++ Sbjct: 182 RLSPKANTL 190 >ref|ZP_01916373.1| hypothetical protein LMED105_10930 [Limnobacter sp. MED105] gb|EDM82350.1| hypothetical protein LMED105_10930 [Limnobacter sp. MED105] Length = 213 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 92/169 (54%), Gaps = 5/169 (2%) Query: 18 ASLLHAHEAHVHGVGKLDVVLDGQALSLHLDSPLVNLVGFEHAANSAKDKAAVQAMTRTL 77 AS H AHVHG G+L++V DG L + L SPL N++GFE A + +K + + L Sbjct: 49 ASSRHNDAAHVHGQGELEIVQDGNGLFISLSSPLENVLGFERAPKTDAEKVKARRVVSLL 108 Query: 78 RGTGTGAVFVASPSAECKLSGVKLESAALDPALLGEPAAAKPAAQAGHDGHADLDADFTF 137 + G +F SP A+CK +G KL S L+P G AA GH+D A + F Sbjct: 109 KANG---LFAFSPEAQCKRTGHKLYSEILNPHSHG--AADDHQHHEDASGHSDFRASYEF 163 Query: 138 RCAHPERLQKIEVRLFDTFKGFNSIDVQLVTGKRQGAAKLTPAANSIAV 186 C P +L+ I+VR+F F GF I+VQ + K Q A LTP +++ V Sbjct: 164 ECEQPAKLKVIDVRVFRQFSGFEKIEVQALFPKGQVGASLTPKQSTLVV 212 >ref|YP_004154041.1| ABC-type metal ion transport system, periplasmic component/surface adhesin [Variovorax paradoxus EPS] gb|ADU35930.1| ABC-type metal ion transport system, periplasmic component/surface adhesin [Variovorax paradoxus EPS] Length = 192 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 81/151 (53%), Gaps = 11/151 (7%) Query: 22 HAHEAHVHGVGKLDVVLDGQALSLHLDSPLVNLVGFEHAANSAKDKAAVQAMTRTLRGTG 81 AHVHG KLDV +DG + + ++SPL N+VGFE A + DKA V+A LR Sbjct: 30 QQQHAHVHGQMKLDVAIDGPTVVIDMESPLDNIVGFERAPKTDADKATVEAAVAQLRAAD 89 Query: 82 TGAVFVASPSAECKLSGVKLESAALDPALLGEPAAAKPAAQAGHDGHADLDADFTFRCAH 141 +F P+A CKL V L S AL LG P +P GHADLDA F+F C + Sbjct: 90 K--LFTIDPAANCKLGPVDLRSGALG---LGNPDPNEPP------GHADLDATFSFNCTN 138 Query: 142 PERLQKIEVRLFDTFKGFNSIDVQLVTGKRQ 172 + I++ LF FKG ID Q+ + + Q Sbjct: 139 AAAAKFIDLNLFSVFKGLRQIDSQIASSQGQ 169 >ref|YP_002943482.1| ABC-type metal ion transport system, periplasmic component/surface adhesin [Variovorax paradoxus S110] gb|ACS18216.1| ABC-type metal ion transport system, periplasmic component/surface adhesin [Variovorax paradoxus S110] Length = 193 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 88/163 (53%), Gaps = 12/163 (7%) Query: 26 AHVHGVGKLDVVLDGQALSLHLDSPLVNLVGFEHAANSAKDKAAVQAMTRTLRGTGTGAV 85 AHVHG KLDV +DG + + ++SPL N+VGFE A + +K + LR + Sbjct: 35 AHVHGQLKLDVAIDGPTVVIDMESPLDNIVGFERAPKTDAEKKTAEDAIAQLRAADK--L 92 Query: 86 FVASPSAECKLSGVKLESAALDPALLGEPAAAKPAAQAGHDGHADLDADFTFRCAHPERL 145 F P+A CKL V+L S+AL LG P A+PA GHADLDA F+F C H Sbjct: 93 FAIDPAANCKLGPVELRSSALG---LGNPDPAEPA------GHADLDATFSFNCTHAAAA 143 Query: 146 QKIEVRLFDTFKGFNSIDVQLVTGKRQGAAKLT-PAANSIAVP 187 + I+V LF FKG ID Q+ + + Q +L PA A P Sbjct: 144 KFIDVNLFSAFKGTRQIDSQIASAQGQFKRQLKRPAGAQAAQP 186