BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0029.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776549.1| uracil DNA glycosylase [Herbaspirillum serop... 396 e-108 ref|YP_004753782.1| putative Uracil DNA glycosylase [Collimonas ... 347 7e-94 ref|YP_001100498.1| putative Uracil DNA glycosylase [Herminiimon... 334 9e-90 ref|YP_001352939.1| uracil DNA glycosylase [Janthinobacterium sp... 332 5e-89 ref|ZP_08273675.1| putative Uracil DNA glycosylase [Oxalobactera... 319 3e-85 >ref|YP_003776549.1| uracil DNA glycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ64641.1| uracil DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/261 (79%), Positives = 225/261 (86%), Gaps = 1/261 (0%) Query: 3 ATVPSALLDLCATADPSWHAILKTGLQAIADLDSDYLPALVQDATYLPTEGRIFAAFKQP 62 A++P+AL DL TA PSWHA L+ GLQAIA D YL L D YLPTEGR+FAAF+QP Sbjct: 6 ASLPAALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATD-HYLPTEGRLFAAFQQP 64 Query: 63 IDKVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSDKGLSKQVNRATSLRNFMKMLLVAD 122 +D+VRYVLVGEGPYPRAASATGVCFMDGAVGSLWS+KGLSKQVNRATSLRNFMKMLLVAD Sbjct: 65 MDRVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVAD 124 Query: 123 GRVPADKTSGGALLDIAAKAQADTAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVKPVK 182 GRV A +TSG AL D+AA+AQAD AGTIQTLADLQDNLTAQGFLLLNASLVFRTHV PVK Sbjct: 125 GRVQAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVK 184 Query: 183 DAKAWKPFFETVLKGLAQYAEENKKTLPTLVLWGKIAEELHGLKIVERFPRAVAEHPYNL 242 DAKAWKPFFETVL+ LA++ KTLPTLVLWGKIAE+L L +V+ FPRAVAEHPYNL Sbjct: 185 DAKAWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNL 244 Query: 243 SFIAHSGMQELFGPMHLLKKR 263 SFI HSGMQ LFG MHLL KR Sbjct: 245 SFIEHSGMQALFGAMHLLDKR 265 >ref|YP_004753782.1| putative Uracil DNA glycosylase [Collimonas fungivorans Ter331] gb|AEK62959.1| conserved hypothetical protein; putative Uracil DNA glycosylase [Collimonas fungivorans Ter331] Length = 262 Score = 347 bits (891), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 173/262 (66%), Positives = 209/262 (79%), Gaps = 5/262 (1%) Query: 1 MPATVPSALLDLCATADPSWHAILKTGLQAIADLDSDYLPALVQDATYLPTEGRIFAAFK 60 +PA++ SAL + A SW AIL+ GL+A+A + YL L A YLPTEGR+FAAF Sbjct: 5 LPASIRSALTGVHA----SWLAILEHGLRAVAQANPAYLKDLAA-ADYLPTEGRMFAAFT 59 Query: 61 QPIDKVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSDKGLSKQVNRATSLRNFMKMLLV 120 QP++ VRYVLVGEGPYPRAASATGVCFMDGAVGSLWS+KGLSKQVNRATSLRNFMKMLLV Sbjct: 60 QPLEAVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLV 119 Query: 121 ADGRVPADKTSGGALLDIAAKAQADTAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVKP 180 ADG++ + T+G A+ D+A +AQ D + IQ LADLQDN+ +GFLLLNASLVFR V P Sbjct: 120 ADGQLALENTTGDAMSDVALQAQKDGSQAIQLLADLQDNMVKRGFLLLNASLVFRPDVPP 179 Query: 181 VKDAKAWKPFFETVLKGLAQYAEENKKTLPTLVLWGKIAEELHGLKIVERFPRAVAEHPY 240 VKDAKAW+PF + VL+GLA A++ + LPTLVLWGKIAE+L+ + RFP+AVAEHPY Sbjct: 180 VKDAKAWQPFMQAVLQGLADAADKRGEDLPTLVLWGKIAEQLNAYPVTARFPKAVAEHPY 239 Query: 241 NLSFIAHSGMQELFGPMHLLKK 262 NLSFI ++GMQ LFGPM LL++ Sbjct: 240 NLSFIGNAGMQALFGPMQLLRR 261 >ref|YP_001100498.1| putative Uracil DNA glycosylase [Herminiimonas arsenicoxydans] emb|CAL62376.1| Putative uracil DNA glycosylase [Herminiimonas arsenicoxydans] Length = 264 Score = 334 bits (856), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 167/264 (63%), Positives = 195/264 (73%), Gaps = 1/264 (0%) Query: 1 MPATVPSALLDLCATADPSWHAILKTGLQAIADLDSDYLPALVQDATYLPTEGRIFAAFK 60 M T+P + + + AD SW IL+ GL A+ DYLPAL D YLP GR+FAAF Sbjct: 1 MSHTIPPSFIAMLDAADASWRPILRAGLDAVHKTSPDYLPALAAD-EYLPNGGRLFAAFA 59 Query: 61 QPIDKVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSDKGLSKQVNRATSLRNFMKMLLV 120 QP+D V YVLVGEGPYPRA SATGVCFMDGAV SLWS+KGLSKQVNRATSLRNFMKMLLV Sbjct: 60 QPLDAVDYVLVGEGPYPRAVSATGVCFMDGAVSSLWSEKGLSKQVNRATSLRNFMKMLLV 119 Query: 121 ADGRVPADKTSGGALLDIAAKAQADTAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVKP 180 ADG++ ++T+G AL ++ KAQA A IQTL +LQ NLT GFLLLNA+LVFR HV P Sbjct: 120 ADGQLAIEQTTGDALAGVSGKAQAAPASIIQTLPELQANLTRHGFLLLNAALVFRPHVPP 179 Query: 181 VKDAKAWKPFFETVLKGLAQYAEENKKTLPTLVLWGKIAEELHGLKIVERFPRAVAEHPY 240 VK+A+AW PF +TVL LA +AE+ KT PTLVLWGKIA +L RFP+ V+EHPY Sbjct: 180 VKEARAWLPFLQTVLAALADHAEDAGKTPPTLVLWGKIAVQLEAFPESARFPKKVSEHPY 239 Query: 241 NLSFIAHSGMQELFGPMHLLKKRA 264 NLSFI + MQ LFG M LLKK + Sbjct: 240 NLSFIGNQVMQNLFGDMQLLKKNS 263 >ref|YP_001352939.1| uracil DNA glycosylase [Janthinobacterium sp. Marseille] gb|ABR90553.1| uracil DNA glycosylase [Janthinobacterium sp. Marseille] Length = 261 Score = 332 bits (850), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 166/262 (63%), Positives = 193/262 (73%), Gaps = 1/262 (0%) Query: 1 MPATVPSALLDLCATADPSWHAILKTGLQAIADLDSDYLPALVQDATYLPTEGRIFAAFK 60 M +P + + + AD SW +L GL A+ DYLP L D +LP GR+FAAF Sbjct: 1 MSHIIPPSFVAMLDAADASWCPVLLAGLNAVQKASPDYLPTLATD-DFLPNAGRLFAAFS 59 Query: 61 QPIDKVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSDKGLSKQVNRATSLRNFMKMLLV 120 QP+ VRYVLVGEGPYPR SATGVCFMDGAV SLWSDKGLSKQVNRATSLRNFMKMLLV Sbjct: 60 QPLAAVRYVLVGEGPYPRPDSATGVCFMDGAVSSLWSDKGLSKQVNRATSLRNFMKMLLV 119 Query: 121 ADGRVPADKTSGGALLDIAAKAQADTAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVKP 180 ADG++ ++T+G AL ++ KAQA IQTL +LQD LT GFLLLNASLVFR HV P Sbjct: 120 ADGQLSIEQTTGDALAGVSQKAQAAPDSVIQTLPELQDKLTEHGFLLLNASLVFRAHVAP 179 Query: 181 VKDAKAWKPFFETVLKGLAQYAEENKKTLPTLVLWGKIAEELHGLKIVERFPRAVAEHPY 240 VKDAKAW PF +TVL LA +A++ +T PTLVLWGKIA +L L RFP+ V+EHPY Sbjct: 180 VKDAKAWLPFLQTVLAALADHAQQAGQTPPTLVLWGKIAVQLEALPESGRFPKKVSEHPY 239 Query: 241 NLSFIAHSGMQELFGPMHLLKK 262 NLSFI ++ MQELFG MHLLKK Sbjct: 240 NLSFIGNAVMQELFGAMHLLKK 261 >ref|ZP_08273675.1| putative Uracil DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32847.1| putative Uracil DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 261 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 164/257 (63%), Positives = 190/257 (73%), Gaps = 6/257 (2%) Query: 5 VPSALLDLCATADPSWHAILKTGLQAIADLDSDYLPALVQDATYLPTEGRIFAAFKQPID 64 +P+A+L ADPSW IL GL+A+ D YL AL QD YLPTEGR+ +AF QP + Sbjct: 2 IPAAILATIERADPSWQPILMAGLKAVNLADPAYLLALAQD-DYLPTEGRLLSAFAQPFE 60 Query: 65 KVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSDKGLSKQVNRATSLRNFMKMLLVADGR 124 VRYVLVGEGPYPRAASATGVCFMDGAV LWSDKGLSK VNRATSLRNFMKMLLVADG Sbjct: 61 SVRYVLVGEGPYPRAASATGVCFMDGAVDLLWSDKGLSKPVNRATSLRNFMKMLLVADGT 120 Query: 125 VPADKTSGGALLDIAAKAQADTAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVKPVKDA 184 + A +TSG A++ A+A A I+TLA LQ+NLT QGFLLLNA+LVFR+HV PV+DA Sbjct: 121 LAAGQTSGEAMIVAGAQALQPGADRIRTLAQLQENLTRQGFLLLNAALVFRSHVPPVRDA 180 Query: 185 KAWKPFFETVLKGLAQYAEENKKTLPTLVLWGKIAEELHGLKIVERFPRAVAEHPYNLSF 244 +AW PF TVL LA ++ PTLVLWGKIA +L L + FPR AEHPYNLSF Sbjct: 181 RAWLPFLNTVLAALA-----DQVAPPTLVLWGKIAAQLDDLPCINGFPRLTAEHPYNLSF 235 Query: 245 IAHSGMQELFGPMHLLK 261 I +S MQ+LF PM LL+ Sbjct: 236 IENSSMQKLFAPMQLLQ 252