BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0018.p         (125 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751871.1| exodeoxyribonuclease VII large subunit [Coll...   160   4e-38
ref|YP_001100745.1| exodeoxyribonuclease VII large subunit [Herm...   154   4e-36
ref|YP_003774591.1| exodeoxyribonuclease VII large subunit [Herb...   153   7e-36
ref|ZP_08275303.1| Exodeoxyribonuclease VII large subunit [Oxalo...   153   1e-35
ref|YP_001354275.1| exodeoxyribonuclease VII large subunit [Jant...   149   1e-34

>ref|YP_004751871.1| exodeoxyribonuclease VII large subunit [Collimonas fungivorans
           Ter331]
 gb|AEK61048.1| Exodeoxyribonuclease VII large subunit [Collimonas fungivorans
           Ter331]
          Length = 509

 Score =  160 bits (406), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/97 (80%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 5   DFSSPTPSAPPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKD 64
           +FSS T     SGPPVL VSALNQAVAR+LER+FPL WV+GEISNF   ASGHWYFTLKD
Sbjct: 58  NFSSDT-DLRSSGPPVLTVSALNQAVARLLERSFPLAWVAGEISNFKSYASGHWYFTLKD 116

Query: 65  DAAQVRAVMFKGRAQHAGFSPREGDKVEVRTLVTLYA 101
           DAAQVR VMFKGRAQHAGF+PR+GDKVEVR LVTLYA
Sbjct: 117 DAAQVRGVMFKGRAQHAGFTPRDGDKVEVRALVTLYA 153


>ref|YP_001100745.1| exodeoxyribonuclease VII large subunit [Herminiimonas
           arsenicoxydans]
 sp|A4G7Y7.1|EX7L_HERAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 emb|CAL62624.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII
           large subunit) (Exonuclease VII large subunit)
           [Herminiimonas arsenicoxydans]
          Length = 453

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 72/94 (76%), Positives = 82/94 (87%), Gaps = 1/94 (1%)

Query: 9   PTPSAPPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQ 68
           P P+  P+   VL VSALNQAV+R+LER+FPL W++GEISNFTRAASGHWYFTLKDDAAQ
Sbjct: 6   PNPNQTPTSN-VLTVSALNQAVSRMLERSFPLTWIAGEISNFTRAASGHWYFTLKDDAAQ 64

Query: 69  VRAVMFKGRAQHAGFSPREGDKVEVRTLVTLYAP 102
           VRAVMF+GRAQ+  F PREGD+VEVR LVTLYAP
Sbjct: 65  VRAVMFRGRAQYTDFMPREGDRVEVRALVTLYAP 98


>ref|YP_003774591.1| exodeoxyribonuclease VII large subunit [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ62683.1| exodeoxyribonuclease VII, large subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 438

 Score =  153 bits (387), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 70/83 (84%), Positives = 76/83 (91%)

Query: 20  VLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQVRAVMFKGRAQ 79
           +L VSALNQAV R+LER FPL+WV GE+SNFTRAASGHWYF LKD+ AQVRAVMFKGRAQ
Sbjct: 1   MLTVSALNQAVGRMLERNFPLLWVKGEVSNFTRAASGHWYFNLKDEGAQVRAVMFKGRAQ 60

Query: 80  HAGFSPREGDKVEVRTLVTLYAP 102
           +AGF PREGDKVEVRTLVTLYAP
Sbjct: 61  YAGFMPREGDKVEVRTLVTLYAP 83


>ref|ZP_08275303.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31232.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 454

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/88 (79%), Positives = 81/88 (92%)

Query: 14  PPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQVRAVM 73
           P +  PVL VSALNQAV+R+LER FPL+WV+GE+SNFTRAASGHWYF+LKD +AQVRAVM
Sbjct: 10  PDTASPVLTVSALNQAVSRMLERNFPLMWVAGEVSNFTRAASGHWYFSLKDASAQVRAVM 69

Query: 74  FKGRAQHAGFSPREGDKVEVRTLVTLYA 101
           F+GRAQ+AGF P+EGDKVEVRTLVTLYA
Sbjct: 70  FRGRAQYAGFIPKEGDKVEVRTLVTLYA 97


>ref|YP_001354275.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp.
           Marseille]
 sp|A6T178.1|EX7L_JANMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName:
           Full=Exodeoxyribonuclease VII large subunit;
           Short=Exonuclease VII large subunit
 gb|ABR88515.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp.
           Marseille]
          Length = 453

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/83 (85%), Positives = 76/83 (91%)

Query: 20  VLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYFTLKDDAAQVRAVMFKGRAQ 79
           VL+VSALNQAV+R+LER FPL WVSGEISNFT AASGHWYFTLKD AAQVRAVMF+GRAQ
Sbjct: 16  VLSVSALNQAVSRMLERNFPLSWVSGEISNFTCAASGHWYFTLKDSAAQVRAVMFRGRAQ 75

Query: 80  HAGFSPREGDKVEVRTLVTLYAP 102
           +A F PREGDKVEVR LVTLYAP
Sbjct: 76  YADFMPREGDKVEVRALVTLYAP 98