BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0115.p (206 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775087.1| branched-chain amino acid ABC transporter AT... 361 3e-98 ref|YP_002006121.1| high-affinity branched-chain amino acid tran... 350 6e-95 ref|YP_004686304.1| HAAT family ABC transporter ATP-binding prot... 348 4e-94 ref|YP_727072.1| ABC transporter ATPase [Ralstonia eutropha H16]... 346 1e-93 ref|YP_584622.1| leucine/isoleucine/valine ABC transporter ATP-b... 344 4e-93 >ref|YP_003775087.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63179.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 235 Score = 361 bits (927), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 176/205 (85%), Positives = 193/205 (94%), Gaps = 1/205 (0%) Query: 2 LMTLCG-KPAGKTTLLMTLCGKPRASSGKIIFEGQDITQRSTHEIMRLGMAISPEGRRVF 60 ++TL G AGKTTLLMTLCG+PRASSG++IFEGQDITQ THEIMR G+AISPEGRRVF Sbjct: 30 IVTLIGANGAGKTTLLMTLCGRPRASSGRVIFEGQDITQLQTHEIMRRGLAISPEGRRVF 89 Query: 61 PSLTVLENLKMGAFFATNDQVEEGVQHVFGLFPRLKERAGQRAGTMSGGEQQMLAIGRAL 120 PSLTVLENLKMGAFFA+N+ +E+G+++VFGLFPRLKERA QRAGTMSGGEQQMLAIGRAL Sbjct: 90 PSLTVLENLKMGAFFASNEAIEQGIEYVFGLFPRLKERAAQRAGTMSGGEQQMLAIGRAL 149 Query: 121 MSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIRDQGVTVFLVEQNANKALGVADRGYVLEN 180 MSKPRLLLLDEPTLGLAPLVIAQIF+IIRTIR+ GVTVFLVEQNANKALGVADRGYVLEN Sbjct: 150 MSKPRLLLLDEPTLGLAPLVIAQIFDIIRTIRESGVTVFLVEQNANKALGVADRGYVLEN 209 Query: 181 GHVVLADTGANLLANDAVRKAYLGH 205 GHVV++DTGANLLAN VRKAYLGH Sbjct: 210 GHVVMSDTGANLLANSDVRKAYLGH 234 >ref|YP_002006121.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, ATP_bind) [Cupriavidus taiwanensis LMG 19424] emb|CAQ70058.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) [Cupriavidus taiwanensis LMG 19424] Length = 233 Score = 350 bits (899), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 170/204 (83%), Positives = 188/204 (92%), Gaps = 1/204 (0%) Query: 2 LMTLCGKP-AGKTTLLMTLCGKPRASSGKIIFEGQDITQRSTHEIMRLGMAISPEGRRVF 60 ++TL G AGKTTL+MT+CG PRASSG+++FEGQDIT RSTHEIMRLGMAISPEGRRVF Sbjct: 29 IVTLIGSNGAGKTTLMMTVCGTPRASSGRVLFEGQDITHRSTHEIMRLGMAISPEGRRVF 88 Query: 61 PSLTVLENLKMGAFFATNDQVEEGVQHVFGLFPRLKERAGQRAGTMSGGEQQMLAIGRAL 120 PSLTVLENLKMGAFFA D++E G++HVF LFPRL +RAGQRAGTMSGGEQQMLAIGRAL Sbjct: 89 PSLTVLENLKMGAFFAKRDEIEAGIEHVFKLFPRLNQRAGQRAGTMSGGEQQMLAIGRAL 148 Query: 121 MSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIRDQGVTVFLVEQNANKALGVADRGYVLEN 180 MS+PRLLLLDEPTLGLAPL+IAQIF+IIRTIRD+GVTVFLVEQNANKAL VADRGYVLE Sbjct: 149 MSRPRLLLLDEPTLGLAPLIIAQIFDIIRTIRDEGVTVFLVEQNANKALQVADRGYVLET 208 Query: 181 GHVVLADTGANLLANDAVRKAYLG 204 G VVLADTGANLLAND ++ AYLG Sbjct: 209 GKVVLADTGANLLANDRIKAAYLG 232 >ref|YP_004686304.1| HAAT family ABC transporter ATP-binding protein [Cupriavidus necator N-1] gb|AEI77823.1| ABC transport system ATP-binding protein HAAT family [Cupriavidus necator N-1] Length = 233 Score = 348 bits (892), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 169/204 (82%), Positives = 186/204 (91%), Gaps = 1/204 (0%) Query: 2 LMTLCGKP-AGKTTLLMTLCGKPRASSGKIIFEGQDITQRSTHEIMRLGMAISPEGRRVF 60 ++TL G AGKTTL+MT+CG PRASSG++ FEGQDIT RSTHEIMRLGMAISPEGRRVF Sbjct: 29 IVTLIGSNGAGKTTLMMTVCGTPRASSGRVTFEGQDITNRSTHEIMRLGMAISPEGRRVF 88 Query: 61 PSLTVLENLKMGAFFATNDQVEEGVQHVFGLFPRLKERAGQRAGTMSGGEQQMLAIGRAL 120 PSLTVLENLKMGAFFA D++E G++HVF LFPRL +RA QRAGTMSGGEQQMLAIGRAL Sbjct: 89 PSLTVLENLKMGAFFARRDEIEAGIEHVFKLFPRLNQRASQRAGTMSGGEQQMLAIGRAL 148 Query: 121 MSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIRDQGVTVFLVEQNANKALGVADRGYVLEN 180 MS+PRLLLLDEPTLGLAPL+IAQIF+IIRTIRD+GVTVFLVEQNANKAL VADRGYVLE Sbjct: 149 MSRPRLLLLDEPTLGLAPLIIAQIFDIIRTIRDEGVTVFLVEQNANKALQVADRGYVLET 208 Query: 181 GHVVLADTGANLLANDAVRKAYLG 204 G VVLADTGANLLAND ++ AYLG Sbjct: 209 GKVVLADTGANLLANDRIKAAYLG 232 >ref|YP_727072.1| ABC transporter ATPase [Ralstonia eutropha H16] emb|CAJ93704.1| ABC-type transporter, ATPase component: HAAT family [Ralstonia eutropha H16] Length = 233 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 168/204 (82%), Positives = 186/204 (91%), Gaps = 1/204 (0%) Query: 2 LMTLCGKP-AGKTTLLMTLCGKPRASSGKIIFEGQDITQRSTHEIMRLGMAISPEGRRVF 60 ++TL G AGKTTL+MT+CG PRASSG++ FEGQDIT RSTHEIMRLG+AISPEGRRVF Sbjct: 29 IVTLIGSNGAGKTTLMMTVCGTPRASSGRVTFEGQDITNRSTHEIMRLGLAISPEGRRVF 88 Query: 61 PSLTVLENLKMGAFFATNDQVEEGVQHVFGLFPRLKERAGQRAGTMSGGEQQMLAIGRAL 120 PSLTVLENLKMGAFFA D++E G++HVF LFPRL +RA QRAGTMSGGEQQMLAIGRAL Sbjct: 89 PSLTVLENLKMGAFFARRDEIEAGIEHVFKLFPRLNQRASQRAGTMSGGEQQMLAIGRAL 148 Query: 121 MSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIRDQGVTVFLVEQNANKALGVADRGYVLEN 180 MS+PRLLLLDEPTLGLAPL+IAQIF+IIRTIRD+GVTVFLVEQNANKAL VADRGYVLE Sbjct: 149 MSRPRLLLLDEPTLGLAPLIIAQIFDIIRTIRDEGVTVFLVEQNANKALQVADRGYVLET 208 Query: 181 GHVVLADTGANLLANDAVRKAYLG 204 G VVLADTGANLLAND ++ AYLG Sbjct: 209 GKVVLADTGANLLANDRIKAAYLG 232 >ref|YP_584622.1| leucine/isoleucine/valine ABC transporter ATP-binding protein [Cupriavidus metallidurans CH34] gb|ABF09353.1| leucine/isoleucine/valine transporter subunit, ATP-binding component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 233 Score = 344 bits (883), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 167/204 (81%), Positives = 186/204 (91%), Gaps = 1/204 (0%) Query: 2 LMTLCGKP-AGKTTLLMTLCGKPRASSGKIIFEGQDITQRSTHEIMRLGMAISPEGRRVF 60 ++TL G AGKTTL+MT+CG PRASSG++ FEGQDIT+R+THEIMR+GMAISPEGRRVF Sbjct: 29 IVTLIGSNGAGKTTLMMTVCGTPRASSGRVSFEGQDITRRNTHEIMRMGMAISPEGRRVF 88 Query: 61 PSLTVLENLKMGAFFATNDQVEEGVQHVFGLFPRLKERAGQRAGTMSGGEQQMLAIGRAL 120 PSLTVLENLKMGAFFA+ ++EEG++HVF LFPRL +RA QRAGTMSGGEQQMLAIGRAL Sbjct: 89 PSLTVLENLKMGAFFASRHEIEEGIEHVFKLFPRLNQRASQRAGTMSGGEQQMLAIGRAL 148 Query: 121 MSKPRLLLLDEPTLGLAPLVIAQIFEIIRTIRDQGVTVFLVEQNANKALGVADRGYVLEN 180 MSKPRLLLLDEPTLGLAPL+IAQIF+IIRTIRD+GVTVFLVEQNANKAL ADRGYVLE Sbjct: 149 MSKPRLLLLDEPTLGLAPLIIAQIFDIIRTIRDEGVTVFLVEQNANKALQAADRGYVLET 208 Query: 181 GHVVLADTGANLLANDAVRKAYLG 204 G VVLADTG NLLAND +R AYLG Sbjct: 209 GKVVLADTGQNLLANDRIRAAYLG 232