BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0112.p (308 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775084.1| branched-chain aminoacid ABC transporter per... 558 e-157 ref|YP_727075.1| ABC transporter permease [Ralstonia eutropha H1... 542 e-152 ref|YP_296524.1| inner-membrane translocator [Ralstonia eutropha... 540 e-151 ref|YP_002006124.1| high-affinity branched-chain amino acid tran... 540 e-151 ref|YP_584625.1| leucine/isoleucine/valine ABC transporter membr... 535 e-150 >ref|YP_003775084.1| branched-chain aminoacid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63176.1| ABC-type branched-chain aminoacid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 294/308 (95%), Positives = 304/308 (98%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYM+ SY+GLVTLTA Sbjct: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIASYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IGVQ+GYPLPLLLG ALIVSV+VTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGVQSGYPLPLLLGGALIVSVLVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RDMSVPVLISGA+EFQMGSDFTVTIPYSRM+IVGVTL+LMV LTLFIARSRM Sbjct: 121 YVQIGQGARDMSVPVLISGALEFQMGSDFTVTIPYSRMVIVGVTLVLMVALTLFIARSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDMGMANLLGIDTN+VISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI Sbjct: 181 GRACRACAEDMGMANLLGIDTNKVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLP+EYKDVVSF LLVLILLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPSEYKDVVSFGLLVLILLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >ref|YP_727075.1| ABC transporter permease [Ralstonia eutropha H16] ref|YP_004686307.1| HAAT family ABC transporter permease [Cupriavidus necator N-1] emb|CAJ93707.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] gb|AEI77826.1| ABC transport system permease protein HAAT family [Cupriavidus necator N-1] Length = 308 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 277/308 (89%), Positives = 300/308 (97%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IG QAGYPLPL+LGAAL+VSV+VTG+YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGAQAGYPLPLVLGAALLVSVLVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVPVLISGAIEFQMGSDFTVT+PYSR++IVGVTL+LM+ LTLFI RSRM Sbjct: 121 YVQIGQGARDVSVPVLISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGRSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTN+VISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFA+GY+PAEYKDVV+F+LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >ref|YP_296524.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ61680.1| L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein [Ralstonia eutropha JMP134] Length = 308 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 276/308 (89%), Positives = 298/308 (96%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IGVQAGYPLPL+LGAAL+VSVV+TG YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGVQAGYPLPLVLGAALLVSVVITGCYGFAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVP+LISGAIEFQMGSDFTVT+PYSR++IVGVTL+LM+ LTLFI SRM Sbjct: 121 YVQIGQGARDVSVPILISGAIEFQMGSDFTVTVPYSRLLIVGVTLVLMIALTLFIGHSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTNRVISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGL ETFA+GY+PAEYKDVV+F+LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLVETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >ref|YP_002006124.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] emb|CAQ70061.1| high-affinity branched-chain amino acid transport protein (ABC superfamily, membrane) [Cupriavidus taiwanensis LMG 19424] Length = 308 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 277/308 (89%), Positives = 298/308 (96%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IG QAGYPLPL+LGAAL+VSV+VTG+YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGAQAGYPLPLVLGAALLVSVMVTGVYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVPVLISGAIEFQMG DFTVT+PYSR++IVGVTL LMV LTLFI RSRM Sbjct: 121 YVQIGQGARDVSVPVLISGAIEFQMGGDFTVTVPYSRLLIVGVTLALMVALTLFIGRSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTN+VISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNKVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFA+GY+PAEYKDVV+F+LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFSLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308 >ref|YP_584625.1| leucine/isoleucine/valine ABC transporter membrane protein [Cupriavidus metallidurans CH34] gb|ABF09356.1| leucine/isoleucine/valine transporter subunit, membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 308 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 276/308 (89%), Positives = 295/308 (95%) Query: 1 MNELLPQLTQQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMMGSYIGLVTLTA 60 MNE LPQ TQQLVNGL+LGAIYALIAIGYTMVYGIIGMINFAHGEIYM+G+Y+GLVTLTA Sbjct: 1 MNEFLPQFTQQLVNGLTLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIGAYVGLVTLTA 60 Query: 61 IGVQAGYPLPLLLGAALIVSVVVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 IG QAGYPLPL+LGAALIVSV VTG YG+ VERVAYRPLRGGPRLVPLISAIGMSIFLQN Sbjct: 61 IGAQAGYPLPLVLGAALIVSVAVTGCYGYAVERVAYRPLRGGPRLVPLISAIGMSIFLQN 120 Query: 121 YVQIGQGSRDMSVPVLISGAIEFQMGSDFTVTIPYSRMIIVGVTLLLMVGLTLFIARSRM 180 YVQIGQG+RD+SVP+LISGAIEFQMG DFTVT+PYSR++IVGVTL+LM+ LTLFI SRM Sbjct: 121 YVQIGQGARDVSVPILISGAIEFQMGGDFTVTVPYSRLLIVGVTLVLMIVLTLFIGHSRM 180 Query: 181 GRACRACAEDMGMANLLGIDTNRVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGI 240 GRACRACAEDM MANLLGIDTNRVISFTFVLGAMLAAVGGVLI LTIGKLNP+IGFIAGI Sbjct: 181 GRACRACAEDMRMANLLGIDTNRVISFTFVLGAMLAAVGGVLIGLTIGKLNPFIGFIAGI 240 Query: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFAAGYLPAEYKDVVSFALLVLILLFRPTGLL 300 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFA+GY+PAEYKDVV+F LLVL+LLFRPTGLL Sbjct: 241 KAFTAAVLGGIGSIPGAMLGGVLLGLAETFASGYMPAEYKDVVAFGLLVLVLLFRPTGLL 300 Query: 301 GKPDVEKV 308 GKPDVEKV Sbjct: 301 GKPDVEKV 308