BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0095.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776613.1| dihydroorotate dehydrogenase [Herbaspirillum... 598 e-169 ref|YP_004753656.1| dihydroorotate dehydrogenase [Collimonas fun... 594 e-168 ref|YP_001354203.1| dihydroorotate dehydrogenase 2 [Janthinobact... 590 e-166 ref|YP_001100695.1| dihydroorotate dehydrogenase 2 [Herminiimona... 585 e-165 ref|ZP_08274141.1| Dihydroorotate dehydrogenase [Oxalobacteracea... 563 e-158 >ref|YP_003776613.1| dihydroorotate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ64705.1| dihydroorotate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 354 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 290/345 (84%), Positives = 322/345 (93%), Gaps = 1/345 (0%) Query: 1 VSDKFLYALARPLLFSLDAESAHHLTLPALRRAAALGLTGLFSK-PAADPRTIMGVTFPN 59 +SDKFLYALARPLLFSL+ E+AHHL LPALR AA LT + PAADPRT+MG+TFPN Sbjct: 1 MSDKFLYALARPLLFSLEPETAHHLVLPALRCAARYSLTDFLGRRPAADPRTVMGITFPN 60 Query: 60 PVGLAAGLDKDGSYIDGLAALGFGSIEIGTVTPRAQPGNPKPRMFRLPAAHAIINRMGFN 119 PVG+AAGLDKDG+YIDGLAALGFG IE+GTVTPRAQPGNP PRMFRLPAA A+INRMGFN Sbjct: 61 PVGMAAGLDKDGAYIDGLAALGFGFIEVGTVTPRAQPGNPLPRMFRLPAASAVINRMGFN 120 Query: 120 NGGVDAFVANVQASRFYQGKQGVLGLNIGKNADTPIERAADDYLHCLEKVYPYASYVTVN 179 NGGVDAFVANVQ+SRFYQ +QGVLGLNIGKNADTPIERAA+DYLHCLEKVYPYASYVTVN Sbjct: 121 NGGVDAFVANVQSSRFYQERQGVLGLNIGKNADTPIERAAEDYLHCLEKVYPYASYVTVN 180 Query: 180 ISSPNTKNLRQLQGASELDALLSQLKDAQLRLADQHKRYVPVALKIAPDIDSEQIKNIAD 239 ISSPNTKNLRQLQGASELDALLSQLK AQ RLAD+H RYVPVALKIAPD+D EQ+KN+AD Sbjct: 181 ISSPNTKNLRQLQGASELDALLSQLKSAQHRLADRHGRYVPVALKIAPDMDMEQVKNVAD 240 Query: 240 ALLRHKLDGVIATNTTITRDAVKGLQYGEEAGGLSGAPVFELSNQVVRGLKAELGDALPI 299 ALLRH++DGVIATNTTITRDAVKG+ +GEEAGGLSG PV ELSNQV+RGLKAE+GDALPI Sbjct: 241 ALLRHQIDGVIATNTTITRDAVKGMPHGEEAGGLSGKPVLELSNQVIRGLKAEVGDALPI 300 Query: 300 IGVGGILSGSNAKAKMEAGASLVQLYSGLIYRGPALVKECADALR 344 IGVGGI SG++A+AK++AGASLVQLY+GLIY+GPALV+ECA+ALR Sbjct: 301 IGVGGIFSGADARAKIDAGASLVQLYTGLIYQGPALVRECAEALR 345 >ref|YP_004753656.1| dihydroorotate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK62833.1| Dihydroorotate dehydrogenase [Collimonas fungivorans Ter331] Length = 356 Score = 594 bits (1531), Expect = e-168, Method: Compositional matrix adjust. Identities = 293/344 (85%), Positives = 316/344 (91%) Query: 1 VSDKFLYALARPLLFSLDAESAHHLTLPALRRAAALGLTGLFSKPAADPRTIMGVTFPNP 60 V K LYA ARP LFSLD ESAH+LTLPALRRAAALGLT L K ADPRT+MG++FPNP Sbjct: 10 VPAKLLYAFARPALFSLDPESAHNLTLPALRRAAALGLTSLLGKTPADPRTVMGISFPNP 69 Query: 61 VGLAAGLDKDGSYIDGLAALGFGSIEIGTVTPRAQPGNPKPRMFRLPAAHAIINRMGFNN 120 VGLAAGLDKDG+YIDGLAALGFGSIE+GTVTPRAQ GNPKPRMFRLPAA+AIINRMGFNN Sbjct: 70 VGLAAGLDKDGAYIDGLAALGFGSIEVGTVTPRAQAGNPKPRMFRLPAANAIINRMGFNN 129 Query: 121 GGVDAFVANVQASRFYQGKQGVLGLNIGKNADTPIERAADDYLHCLEKVYPYASYVTVNI 180 GGVDAFVANVQASRFYQ +QGVLGLNIGKNADTPIERAA+DYLHCL+KVYPYASYVTVNI Sbjct: 130 GGVDAFVANVQASRFYQERQGVLGLNIGKNADTPIERAAEDYLHCLQKVYPYASYVTVNI 189 Query: 181 SSPNTKNLRQLQGASELDALLSQLKDAQLRLADQHKRYVPVALKIAPDIDSEQIKNIADA 240 SSPNTKNLRQLQGASELDALLSQLK AQ +LADQ++RYVP+ALKIAPDID+EQIK IADA Sbjct: 190 SSPNTKNLRQLQGASELDALLSQLKQAQQKLADQYQRYVPIALKIAPDIDAEQIKTIADA 249 Query: 241 LLRHKLDGVIATNTTITRDAVKGLQYGEEAGGLSGAPVFELSNQVVRGLKAELGDALPII 300 LLRHK+DGVIATNTTI+RDAV+GLQ+ EAGGLSGAPV LS VVR L ELGDALPII Sbjct: 250 LLRHKIDGVIATNTTISRDAVRGLQHENEAGGLSGAPVLALSTSVVRQLHGELGDALPII 309 Query: 301 GVGGILSGSNAKAKMEAGASLVQLYSGLIYRGPALVKECADALR 344 GVGGI SG++A+AKM AGASLVQLYSGLIYRGPALV+ECA ALR Sbjct: 310 GVGGIFSGADAQAKMAAGASLVQLYSGLIYRGPALVRECAAALR 353 >ref|YP_001354203.1| dihydroorotate dehydrogenase 2 [Janthinobacterium sp. Marseille] sp|A6T106.1|PYRD_JANMA RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gb|ABR88507.1| dihydroorotate oxidase [Janthinobacterium sp. Marseille] Length = 345 Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust. Identities = 283/344 (82%), Positives = 316/344 (91%) Query: 1 VSDKFLYALARPLLFSLDAESAHHLTLPALRRAAALGLTGLFSKPAADPRTIMGVTFPNP 60 +SDK LY LARP LF++D E+AH+LTLPALRRAAA+GLT KPA DPRT+MG+TFPNP Sbjct: 1 MSDKLLYTLARPFLFAIDPEAAHNLTLPALRRAAAMGLTSSIVKPAHDPRTVMGITFPNP 60 Query: 61 VGLAAGLDKDGSYIDGLAALGFGSIEIGTVTPRAQPGNPKPRMFRLPAAHAIINRMGFNN 120 VGLAAGLDKDG+YIDGLA LGFGSIE+GTVTPRAQPGNP PRMFRLP A+AIINRMGFNN Sbjct: 61 VGLAAGLDKDGAYIDGLATLGFGSIEVGTVTPRAQPGNPMPRMFRLPKANAIINRMGFNN 120 Query: 121 GGVDAFVANVQASRFYQGKQGVLGLNIGKNADTPIERAADDYLHCLEKVYPYASYVTVNI 180 GG DAFVANV++S+FYQ K+GVLGLNIGKNADTPIERA DDYL CLEKVYPYASYVTVNI Sbjct: 121 GGADAFVANVRSSKFYQNKEGVLGLNIGKNADTPIERAVDDYLICLEKVYPYASYVTVNI 180 Query: 181 SSPNTKNLRQLQGASELDALLSQLKDAQLRLADQHKRYVPVALKIAPDIDSEQIKNIADA 240 SSPNTKNLRQLQGASELDALLSQLK+AQ RL+DQHKRYVP+ALKIAPD++ EQI+ IA A Sbjct: 181 SSPNTKNLRQLQGASELDALLSQLKEAQQRLSDQHKRYVPIALKIAPDMELEQIQTIAQA 240 Query: 241 LLRHKLDGVIATNTTITRDAVKGLQYGEEAGGLSGAPVFELSNQVVRGLKAELGDALPII 300 LLRHK+DGVIATNTT++R+AVKGL+Y EE GGLSGAPVFE SN V+R LK+ELGDALPII Sbjct: 241 LLRHKMDGVIATNTTVSREAVKGLKYAEETGGLSGAPVFEASNTVIRALKSELGDALPII 300 Query: 301 GVGGILSGSNAKAKMEAGASLVQLYSGLIYRGPALVKECADALR 344 GVGGILSG++A+AK+ AGASLVQLY+GLIYRGPALVKECA AL Sbjct: 301 GVGGILSGNDAQAKIAAGASLVQLYTGLIYRGPALVKECAAALH 344 >ref|YP_001100695.1| dihydroorotate dehydrogenase 2 [Herminiimonas arsenicoxydans] sp|A4G7T7.1|PYRD_HERAR RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase emb|CAL62574.1| Dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) [Herminiimonas arsenicoxydans] Length = 347 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 281/344 (81%), Positives = 316/344 (91%) Query: 1 VSDKFLYALARPLLFSLDAESAHHLTLPALRRAAALGLTGLFSKPAADPRTIMGVTFPNP 60 +S+KFLYALARP LF++D E+AH+LTL ALRRAA+LG T +KPA DPRT+MG+TFPNP Sbjct: 1 MSEKFLYALARPFLFAIDPEAAHNLTLHALRRAASLGWTSAIAKPAHDPRTVMGITFPNP 60 Query: 61 VGLAAGLDKDGSYIDGLAALGFGSIEIGTVTPRAQPGNPKPRMFRLPAAHAIINRMGFNN 120 VGLAAGLDKDG+YIDGLA LGFG IE+GTVTP AQPGNP PRMFRLP A+AIINRMGFNN Sbjct: 61 VGLAAGLDKDGAYIDGLATLGFGFIEVGTVTPHAQPGNPLPRMFRLPQANAIINRMGFNN 120 Query: 121 GGVDAFVANVQASRFYQGKQGVLGLNIGKNADTPIERAADDYLHCLEKVYPYASYVTVNI 180 GGVDAFV+NVQASRFYQ K+G+LGLNIGKNADTPIERA DDYL CLEKVYPYASYVTVNI Sbjct: 121 GGVDAFVSNVQASRFYQNKEGILGLNIGKNADTPIERAVDDYLICLEKVYPYASYVTVNI 180 Query: 181 SSPNTKNLRQLQGASELDALLSQLKDAQLRLADQHKRYVPVALKIAPDIDSEQIKNIADA 240 SSPNTKNLRQLQGASELDALL+QLK+AQ RLADQH+RYVP+ALKIAPDID+EQI+ IA A Sbjct: 181 SSPNTKNLRQLQGASELDALLAQLKEAQQRLADQHQRYVPIALKIAPDIDTEQIQTIAQA 240 Query: 241 LLRHKLDGVIATNTTITRDAVKGLQYGEEAGGLSGAPVFELSNQVVRGLKAELGDALPII 300 LLRHK+DGVIATNTTI R+AVK +++ EEAGGLSGAPVF SN V+R LKAELGDALPII Sbjct: 241 LLRHKMDGVIATNTTINREAVKNMKHAEEAGGLSGAPVFASSNAVIRALKAELGDALPII 300 Query: 301 GVGGILSGSNAKAKMEAGASLVQLYSGLIYRGPALVKECADALR 344 GVGGILSG++A+AK+ AGASLVQLY+GLIYRGPAL++ECA ALR Sbjct: 301 GVGGILSGTDAQAKIAAGASLVQLYTGLIYRGPALIRECAAALR 344 >ref|ZP_08274141.1| Dihydroorotate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32387.1| Dihydroorotate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 347 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 279/344 (81%), Positives = 306/344 (88%) Query: 1 VSDKFLYALARPLLFSLDAESAHHLTLPALRRAAALGLTGLFSKPAADPRTIMGVTFPNP 60 +SDK LYA ARPLLF LDAE AH+LTLPALRRAAALGLTGL KPAADPR++MG+ FPNP Sbjct: 1 MSDKLLYAAARPLLFLLDAEDAHNLTLPALRRAAALGLTGLIPKPAADPRSVMGLRFPNP 60 Query: 61 VGLAAGLDKDGSYIDGLAALGFGSIEIGTVTPRAQPGNPKPRMFRLPAAHAIINRMGFNN 120 VGLAAGLDKDG+YIDGLAALGFG IE+GTVTPRAQ GNPKPRMFRL A+A+INRMGFNN Sbjct: 61 VGLAAGLDKDGAYIDGLAALGFGFIEVGTVTPRAQLGNPKPRMFRLSQANALINRMGFNN 120 Query: 121 GGVDAFVANVQASRFYQGKQGVLGLNIGKNADTPIERAADDYLHCLEKVYPYASYVTVNI 180 GG DAFV NVQASRFYQ K G+LGLNIGKNADTPIERAA+DYL CLEKVYPYASYVTVNI Sbjct: 121 GGADAFVRNVQASRFYQEKTGILGLNIGKNADTPIERAAEDYLICLEKVYPYASYVTVNI 180 Query: 181 SSPNTKNLRQLQGASELDALLSQLKDAQLRLADQHKRYVPVALKIAPDIDSEQIKNIADA 240 SSPNTKNLRQLQGA ELDALLSQLK AQ RLADQH RYVP+ LKIAPDID+EQIK IA A Sbjct: 181 SSPNTKNLRQLQGADELDALLSQLKSAQQRLADQHGRYVPLTLKIAPDIDTEQIKTIAAA 240 Query: 241 LLRHKLDGVIATNTTITRDAVKGLQYGEEAGGLSGAPVFELSNQVVRGLKAELGDALPII 300 LLRH +DGVIATNTT R AVK + + +EAGGLSGAPV +LS V+R LKAELGD +PII Sbjct: 241 LLRHGIDGVIATNTTTNRAAVKDMTHADEAGGLSGAPVKDLSTAVIRALKAELGDTVPII 300 Query: 301 GVGGILSGSNAKAKMEAGASLVQLYSGLIYRGPALVKECADALR 344 GVGGILSG++AK K +AGA+LVQLY+GLIYRGPALV+ECA AL+ Sbjct: 301 GVGGILSGADAKEKQDAGAALVQLYTGLIYRGPALVRECASALK 344