BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0093.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773502.1| glutamine ABC transporter permease [Herbaspi... 468 e-130 ref|ZP_03827725.1| amino acid ABC transporter [Pectobacterium ca... 389 e-106 ref|YP_051626.1| amino acid ABC transporter [Pectobacterium atro... 388 e-106 ref|YP_003018908.1| polar amino acid ABC transporter inner membr... 387 e-106 ref|YP_003260856.1| polar amino acid ABC transporter inner membr... 387 e-106 >ref|YP_003773502.1| glutamine ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61594.1| ABC-type glutamine transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 250 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 228/250 (91%), Positives = 239/250 (95%) Query: 1 MNSFFQWEIIGEYLPLFIEGTWMTIKVALICVISGTCWGLALGVGRLAEARHGFWKYFLR 60 MNSFFQWEIIGEYLPLF+EGTWMT+K A+ICVI+GTCWGL LGVGRLAEARHGFWKYFL Sbjct: 1 MNSFFQWEIIGEYLPLFVEGTWMTLKAAIICVIAGTCWGLVLGVGRLAEARHGFWKYFLC 60 Query: 61 YAVQLPVRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGLILSGDIAREIRSQYGAFAS 120 Y VQ P+RFYVSFLRGTPLFVQILLIHFALMPMLINPSGGLILSGD+AREIRS YGAFAS Sbjct: 61 YCVQWPIRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGLILSGDLAREIRSHYGAFAS 120 Query: 121 AVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMTYMQTLRKVVLPQAFRRMLPPLG 180 AVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGM+Y+ TLR+VVLPQAFRRMLPPLG Sbjct: 121 AVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMSYLATLRRVVLPQAFRRMLPPLG 180 Query: 181 NNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISLVYWAITLLLSAFVRHL 240 NNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTIS++YW ITL LSA VRHL Sbjct: 181 NNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISVIYWLITLALSALVRHL 240 Query: 241 ENRYGKGDAR 250 E RYGKGDAR Sbjct: 241 EARYGKGDAR 250 >ref|ZP_03827725.1| amino acid ABC transporter [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 254 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/251 (74%), Positives = 213/251 (84%), Gaps = 5/251 (1%) Query: 5 FQWEIIGEYLPLFIEGTWMTIKVALICVISGTCWGLALGVGRLAEARHGFWKYFLRYAVQ 64 F+WEII EY PLF+EGTWMTIK +ICVI GTCWGL LG+GRLA+A HG WKY L Y VQ Sbjct: 4 FRWEIIQEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQ 63 Query: 65 LPVRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGL-----ILSGDIAREIRSQYGAFA 119 PVR Y+S RGTPLFVQI+++HFAL+P+ INP GL I+S D AR +RS YGAF Sbjct: 64 WPVRIYISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFL 123 Query: 120 SAVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMTYMQTLRKVVLPQAFRRMLPPL 179 S ++AITLN+GAYVSEIFRAGIQSIDRGQ EASRSLGM+Y +T+RKV+LPQAFRRMLPPL Sbjct: 124 SCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPL 183 Query: 180 GNNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISLVYWAITLLLSAFVRH 239 GNNAIAIVKDSSLASAIGLA+LAYAARTVSGAYA YWEPYLTIS+VYW IT LLS VRH Sbjct: 184 GNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLVRH 243 Query: 240 LENRYGKGDAR 250 +E R+GK D+R Sbjct: 244 METRFGKSDSR 254 >ref|YP_051626.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043] emb|CAG76436.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043] Length = 254 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/251 (74%), Positives = 213/251 (84%), Gaps = 5/251 (1%) Query: 5 FQWEIIGEYLPLFIEGTWMTIKVALICVISGTCWGLALGVGRLAEARHGFWKYFLRYAVQ 64 F+WEII EY PLF+EGTWMTIK +ICVI GTCWGL LG+GRLA+A HG WKY L Y +Q Sbjct: 4 FRWEIIQEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGIQ 63 Query: 65 LPVRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGL-----ILSGDIAREIRSQYGAFA 119 PVR Y+S RGTPLFVQI+++HFAL+P+LINP GL I+S D AR +RS YGAF Sbjct: 64 WPVRIYISAFRGTPLFVQIMVVHFALVPLLINPRDGLLVTSNIMSVDFARTLRSDYGAFL 123 Query: 120 SAVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMTYMQTLRKVVLPQAFRRMLPPL 179 S V+AITLN+GAYVSEIFRAGIQSIDRGQ EASRSLGM+Y +T+RKV+LPQAFRRMLPPL Sbjct: 124 SCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPL 183 Query: 180 GNNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISLVYWAITLLLSAFVRH 239 GNNAIAIVKDSSLASAIGLA+LAYAARTVSGAYA YWEPYL IS+VYW IT LLS VRH Sbjct: 184 GNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLVRH 243 Query: 240 LENRYGKGDAR 250 +E R+GK D+R Sbjct: 244 MEMRFGKSDSR 254 >ref|YP_003018908.1| polar amino acid ABC transporter inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gb|ACT14372.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 254 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/251 (74%), Positives = 213/251 (84%), Gaps = 5/251 (1%) Query: 5 FQWEIIGEYLPLFIEGTWMTIKVALICVISGTCWGLALGVGRLAEARHGFWKYFLRYAVQ 64 F+WEII EY PLF+EGTWMTIK +ICVI GTCWGL LG+GRLA+A HG WKY L Y VQ Sbjct: 4 FRWEIIQEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQ 63 Query: 65 LPVRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGL-----ILSGDIAREIRSQYGAFA 119 PVR Y+S RGTPLFVQI+++HFAL+P+ INP GL I+S D+AR +R+ YGAF Sbjct: 64 WPVRIYISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDVARTLRADYGAFL 123 Query: 120 SAVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMTYMQTLRKVVLPQAFRRMLPPL 179 S ++AITLN+GAYVSEIFRAGIQSIDRGQ EASRSLGM+Y +T+RKV+LPQAFRRMLPPL Sbjct: 124 SCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPL 183 Query: 180 GNNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISLVYWAITLLLSAFVRH 239 GNNAIAIVKDSSLASAIGLA+LAYAARTVSGAYA YWEPYL IS+VYW IT LLS VRH Sbjct: 184 GNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLVRH 243 Query: 240 LENRYGKGDAR 250 +E R+GK D+R Sbjct: 244 METRFGKSDSR 254 >ref|YP_003260856.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gb|ACX89249.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 254 Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/251 (74%), Positives = 212/251 (84%), Gaps = 5/251 (1%) Query: 5 FQWEIIGEYLPLFIEGTWMTIKVALICVISGTCWGLALGVGRLAEARHGFWKYFLRYAVQ 64 F+WEII EY PLF+EGTWMTIK +ICVI GTCWGL LG+GRLA+A HG WKY L Y VQ Sbjct: 4 FRWEIIQEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQ 63 Query: 65 LPVRFYVSFLRGTPLFVQILLIHFALMPMLINPSGGL-----ILSGDIAREIRSQYGAFA 119 PVR Y+S RGTPLFVQI+++HFAL+P+ INP GL I+S D AR +RS YGAF Sbjct: 64 WPVRIYISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFL 123 Query: 120 SAVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMTYMQTLRKVVLPQAFRRMLPPL 179 S V+AITLN+GAYVSEIFRAGIQSIDRGQ EASRSLGM+Y +T+RKV+LPQAFRRMLPPL Sbjct: 124 SCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPL 183 Query: 180 GNNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISLVYWAITLLLSAFVRH 239 GNNAIAIVKDSSLASAIGLA+LAYAARTVSGAYA YWEPYL IS+VYW IT LLS VRH Sbjct: 184 GNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLVRH 243 Query: 240 LENRYGKGDAR 250 +E R+GK D+R Sbjct: 244 MEMRFGKSDSR 254