BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0088.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001098486.1| leucine-responsive regulatory protein [Hermi... 219 1e-55 ref|YP_001351836.1| Lpr family transcriptional regulator [Janthi... 215 2e-54 ref|YP_004754781.1| leucine-responsive regulatory protein [Colli... 211 2e-53 ref|ZP_08402779.1| AsnC family transcriptional regulator [Rubriv... 196 7e-49 ref|YP_001021307.1| AsnC family transcriptional regulator [Methy... 191 4e-47 >ref|YP_001098486.1| leucine-responsive regulatory protein [Herminiimonas arsenicoxydans] emb|CAL60357.1| Leucine-responsive regulatory protein [Herminiimonas arsenicoxydans] Length = 155 Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 106/150 (70%), Positives = 126/150 (84%) Query: 1 MDKLDVKILELLQQDGRMSNVDISENIHLSPPQCLRRVRVLEEQGVIRRYAALVAPAAVG 60 D+ D +LE LQ GR+SNV++SE ++LSPPQC RRV+ LE++GVIR YAALV AA+G Sbjct: 4 FDRYDRILLETLQSKGRVSNVELSERVNLSPPQCYRRVQRLEQEGVIRGYAALVDAAALG 63 Query: 61 LDVTAFVALSLDRAQFKQVREVESVIRDFPEIIECYTISGDFDYLLKVVSHDLKSLSHFL 120 L VTAFV L++ R QFKQVRE+E IR FPEI+ECYTISGDFDYLLKVV+ DLKSLS FL Sbjct: 64 LGVTAFVNLNIAREQFKQVRELEQAIRQFPEILECYTISGDFDYLLKVVATDLKSLSSFL 123 Query: 121 TDRLMQVPGVAGLRSMICLEEVKPLSGLPI 150 TDRLMQVPGVAG+RSM+CLEE+KP S LP+ Sbjct: 124 TDRLMQVPGVAGVRSMVCLEEIKPASPLPL 153 >ref|YP_001351836.1| Lpr family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89414.1| transcriptional regulator, lrP family [Janthinobacterium sp. Marseille] Length = 155 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 104/150 (69%), Positives = 124/150 (82%) Query: 1 MDKLDVKILELLQQDGRMSNVDISENIHLSPPQCLRRVRVLEEQGVIRRYAALVAPAAVG 60 D+ D +LE LQ GR SNV++SE ++LSPPQC RRV+ LE++GVIR Y+A V AA+G Sbjct: 4 FDRYDRILLETLQSKGRASNVELSERVNLSPPQCYRRVQRLEQEGVIRGYSAQVDAAAIG 63 Query: 61 LDVTAFVALSLDRAQFKQVREVESVIRDFPEIIECYTISGDFDYLLKVVSHDLKSLSHFL 120 L VTAFV L++ R QFKQVRE+E IR FPEI+ECYTISGDFDYLLKVV+ DLKSLS FL Sbjct: 64 LGVTAFVNLNIAREQFKQVRELEKAIRQFPEILECYTISGDFDYLLKVVAVDLKSLSSFL 123 Query: 121 TDRLMQVPGVAGLRSMICLEEVKPLSGLPI 150 TDRLMQVPGVAG+RSM+CLEE+KP S LP+ Sbjct: 124 TDRLMQVPGVAGVRSMVCLEEIKPASPLPL 153 >ref|YP_004754781.1| leucine-responsive regulatory protein [Collimonas fungivorans Ter331] gb|AEK63958.1| Leucine-responsive regulatory protein [Collimonas fungivorans Ter331] Length = 155 Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 101/150 (67%), Positives = 123/150 (82%) Query: 1 MDKLDVKILELLQQDGRMSNVDISENIHLSPPQCLRRVRVLEEQGVIRRYAALVAPAAVG 60 +D+ D +L LQ +GR SNV++SE ++LSPPQC RRV+ LE+ G+IR YAA V PAA+G Sbjct: 4 LDRYDRILLRTLQANGRASNVELSEQVNLSPPQCYRRVQRLEKDGIIRGYAAQVEPAAIG 63 Query: 61 LDVTAFVALSLDRAQFKQVREVESVIRDFPEIIECYTISGDFDYLLKVVSHDLKSLSHFL 120 L V AFV L++ R QFKQVR++E IR FPEI+ECYTISGDFDYLLKV + DLKSLS FL Sbjct: 64 LGVVAFVNLNIAREQFKQVRKLEKAIRLFPEILECYTISGDFDYLLKVAASDLKSLSAFL 123 Query: 121 TDRLMQVPGVAGLRSMICLEEVKPLSGLPI 150 TDRLMQVPGVAG+RSM+CLEE+KP S LP+ Sbjct: 124 TDRLMQVPGVAGVRSMVCLEEIKPSSPLPL 153 >ref|ZP_08402779.1| AsnC family transcriptional regulator [Rubrivivax benzoatilyticus JA2] gb|EGJ11112.1| AsnC family transcriptional regulator [Rubrivivax benzoatilyticus JA2] Length = 155 Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 92/149 (61%), Positives = 121/149 (81%) Query: 1 MDKLDVKILELLQQDGRMSNVDISENIHLSPPQCLRRVRVLEEQGVIRRYAALVAPAAVG 60 +D +D KI+ LQ+DGR+SNV+++ +HLS PQCLRR R LEE+GV+R Y A V AA+G Sbjct: 4 LDAIDRKIVAELQRDGRVSNVELATRVHLSAPQCLRRTRALEERGVLRGYGARVDAAALG 63 Query: 61 LDVTAFVALSLDRAQFKQVREVESVIRDFPEIIECYTISGDFDYLLKVVSHDLKSLSHFL 120 VTAFV+L++ F +VR++E+ IRDFP+I+EC+T+SGD DYLLKVV+HDLK+LS FL Sbjct: 64 YGVTAFVSLNIHGGAFDRVRDIEARIRDFPQILECHTVSGDCDYLLKVVAHDLKALSQFL 123 Query: 121 TDRLMQVPGVAGLRSMICLEEVKPLSGLP 149 TDRLMQ+PGV +RSMICLEE+KP + LP Sbjct: 124 TDRLMQIPGVDDVRSMICLEEIKPQAPLP 152 >ref|YP_001021307.1| AsnC family transcriptional regulator [Methylibium petroleiphilum PM1] gb|ABM95072.1| transcriptional regulator, AsnC family [Methylibium petroleiphilum PM1] Length = 156 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 94/153 (61%), Positives = 115/153 (75%) Query: 1 MDKLDVKILELLQQDGRMSNVDISENIHLSPPQCLRRVRVLEEQGVIRRYAALVAPAAVG 60 +D LD ++L LQ GR SNV++S +HLS PQC RRVR LEE+GVIR YAA V A+G Sbjct: 4 LDALDRRLLAELQARGRASNVELSAAVHLSAPQCFRRVRSLEERGVIRGYAAHVDREALG 63 Query: 61 LDVTAFVALSLDRAQFKQVREVESVIRDFPEIIECYTISGDFDYLLKVVSHDLKSLSHFL 120 L V A+V++ + QF VRE E IRDFP+I+EC+T+SGD DYLLKVV+ DLKSLS FL Sbjct: 64 LGVMAYVSVDIAAEQFGHVREFEQTIRDFPQILECHTVSGDSDYLLKVVARDLKSLSQFL 123 Query: 121 TDRLMQVPGVAGLRSMICLEEVKPLSGLPIRLE 153 TDRLMQ+ GVA +RSMIC+EE+KP S LP E Sbjct: 124 TDRLMQISGVANVRSMICMEEIKPPSPLPTTTE 156