BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0086.p (203 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004152476.1| LysR family transcriptional regulator [Vario... 276 1e-72 ref|YP_001117709.1| LysR family transcriptional regulator [Burkh... 268 3e-70 ref|ZP_02882414.1| transcriptional regulator, LysR family [Burkh... 267 8e-70 ref|ZP_02380933.1| transcriptional regulator, LysR family protei... 266 1e-69 ref|ZP_02906781.1| transcriptional regulator, LysR family [Burkh... 266 1e-69 >ref|YP_004152476.1| LysR family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU34365.1| transcriptional regulator, LysR family [Variovorax paradoxus EPS] Length = 317 Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 130/203 (64%), Positives = 161/203 (79%) Query: 1 VRGTVRITASEVIGVEVLPPILLALKRSHPELVIELALSSRIEDLLKREADIAVRMVQPT 60 +RG VRI+ASEVIGVEVLPPI+ L+ +HP L +EL L++R++DLL+READIAVRMV+P Sbjct: 96 IRGVVRISASEVIGVEVLPPIVARLREAHPALKVELVLTNRVQDLLRREADIAVRMVRPK 155 Query: 61 QEVLVARRIGAIELGMHAHKDYLAQHGTPKDLAQLNEHAIIGFDKETAFIRSAAKHMPAL 120 QE LVARR+G IELG HA KDYLA+ GTP+ L HA+IG+D+ +AF+R+A K +P Sbjct: 156 QEQLVARRVGQIELGFHARKDYLARRGTPRKQEDLAAHAVIGYDQPSAFVRNAGKALPGY 215 Query: 121 RRSQFALRTSSDIAQLAMIRAGYGIGFCQTPLARRDASLVRVLAKQFSFALETWVVMHED 180 R F+LRT SD+AQLA+IRAG GIG CQ LARRDA+LVR++ + FS LETW+ MHED Sbjct: 216 GRDAFSLRTDSDLAQLALIRAGAGIGICQAGLARRDAALVRLMPRAFSMKLETWITMHED 275 Query: 181 LRNSARVRVAFDALAAGLQEYIN 203 LRNS R RVAFDAL GLQ YI+ Sbjct: 276 LRNSPRCRVAFDALVDGLQAYID 298 >ref|YP_001117709.1| LysR family transcriptional regulator [Burkholderia vietnamiensis G4] gb|ABO58244.1| transcriptional regulator, LysR family [Burkholderia vietnamiensis G4] Length = 299 Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/201 (66%), Positives = 155/201 (77%) Query: 1 VRGTVRITASEVIGVEVLPPILLALKRSHPELVIELALSSRIEDLLKREADIAVRMVQPT 60 VRG VRI+AS+VI VEVLPP+L L R HP LVIEL + RI+D+L READIAVRM P Sbjct: 93 VRGIVRISASDVIAVEVLPPMLAQLHRDHPGLVIELVSTDRIQDVLNREADIAVRMAPPA 152 Query: 61 QEVLVARRIGAIELGMHAHKDYLAQHGTPKDLAQLNEHAIIGFDKETAFIRSAAKHMPAL 120 Q+ LVARRIGAIE+ +HA DYLA++GTP + +L HA+IGFD T FIR+A + MP Sbjct: 153 QDALVARRIGAIEVALHARDDYLARNGTPSTVDELARHALIGFDTVTPFIRAAGRAMPQW 212 Query: 121 RRSQFALRTSSDIAQLAMIRAGYGIGFCQTPLARRDASLVRVLAKQFSFALETWVVMHED 180 +R FALRT S++AQLAMIRAGYGIGFCQ+ LARRDA LVRVL + ALETWVVMHED Sbjct: 213 KRDAFALRTDSNLAQLAMIRAGYGIGFCQSALARRDARLVRVLPDTPALALETWVVMHED 272 Query: 181 LRNSARVRVAFDALAAGLQEY 201 LR S R RV FDALA GL+ Y Sbjct: 273 LRTSPRCRVVFDALANGLRGY 293 >ref|ZP_02882414.1| transcriptional regulator, LysR family [Burkholderia graminis C4D1M] gb|EDT11617.1| transcriptional regulator, LysR family [Burkholderia graminis C4D1M] Length = 295 Score = 267 bits (682), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 125/203 (61%), Positives = 158/203 (77%) Query: 1 VRGTVRITASEVIGVEVLPPILLALKRSHPELVIELALSSRIEDLLKREADIAVRMVQPT 60 V+G VR+ ASEV+G EVLPPI+ AL+ +P+LV+EL LS+R+EDLLKREAD+AVRM++P Sbjct: 93 VQGAVRVAASEVVGAEVLPPIIAALRERYPQLVVELVLSNRVEDLLKREADVAVRMMRPK 152 Query: 61 QEVLVARRIGAIELGMHAHKDYLAQHGTPKDLAQLNEHAIIGFDKETAFIRSAAKHMPAL 120 Q LVARRIG IELG+HA +DYLA+HGTP++ A L +HAIIG+D+ +AF+R A+K P Sbjct: 153 QTQLVARRIGNIELGLHARRDYLAKHGTPRNAAALWQHAIIGYDRPSAFVRDASKAFPGY 212 Query: 121 RRSQFALRTSSDIAQLAMIRAGYGIGFCQTPLARRDASLVRVLAKQFSFALETWVVMHED 180 R+ ++RT +D+AQLA+IRAG GIG CQ LARRD SLVRVL K + L+TWV MHED Sbjct: 213 SRAGLSIRTDNDLAQLALIRAGAGIGVCQVALARRDKSLVRVLPKLVALRLDTWVTMHED 272 Query: 181 LRNSARVRVAFDALAAGLQEYIN 203 LRNS R R FDAL GL Y+ Sbjct: 273 LRNSPRCRATFDALVEGLMGYVQ 295 >ref|ZP_02380933.1| transcriptional regulator, LysR family protein [Burkholderia ubonensis Bu] Length = 299 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/203 (64%), Positives = 153/203 (75%) Query: 1 VRGTVRITASEVIGVEVLPPILLALKRSHPELVIELALSSRIEDLLKREADIAVRMVQPT 60 V G VRI+AS+VIGVEVLPP+L L+R HP LV+ELA + RI+D+L READIAVRM P Sbjct: 93 VSGVVRISASDVIGVEVLPPMLTQLRRDHPGLVVELAPTDRIQDVLNREADIAVRMAPPA 152 Query: 61 QEVLVARRIGAIELGMHAHKDYLAQHGTPKDLAQLNEHAIIGFDKETAFIRSAAKHMPAL 120 Q+ LVARRIG IELGM+A DYLA+HG P LA+L +HA+IGFD T F+R+AA +P Sbjct: 153 QDALVARRIGNIELGMYARDDYLAEHGAPATLAELAQHALIGFDAMTPFLRAAAHALPIW 212 Query: 121 RRSQFALRTSSDIAQLAMIRAGYGIGFCQTPLARRDASLVRVLAKQFSFALETWVVMHED 180 R FALRT S++AQLA+IRAGYGIG CQT LA+RDA LVRVL Q LETWVVMHED Sbjct: 213 NRDAFALRTDSNLAQLALIRAGYGIGICQTALAKRDARLVRVLPDQVVLPLETWVVMHED 272 Query: 181 LRNSARVRVAFDALAAGLQEYIN 203 LR S R R FDAL GL Y+ Sbjct: 273 LRASPRCRATFDALVRGLLAYVG 295 >ref|ZP_02906781.1| transcriptional regulator, LysR family [Burkholderia ambifaria MEX-5] gb|EDT42070.1| transcriptional regulator, LysR family [Burkholderia ambifaria MEX-5] Length = 299 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 130/203 (64%), Positives = 153/203 (75%) Query: 1 VRGTVRITASEVIGVEVLPPILLALKRSHPELVIELALSSRIEDLLKREADIAVRMVQPT 60 VRGTVRI+AS+VI VEVLPP+L L+R HP LVIEL + RI+D+L READIAVRM P Sbjct: 93 VRGTVRISASDVIAVEVLPPMLAQLRRDHPGLVIELVPTDRIQDVLNREADIAVRMAPPA 152 Query: 61 QEVLVARRIGAIELGMHAHKDYLAQHGTPKDLAQLNEHAIIGFDKETAFIRSAAKHMPAL 120 Q+ LVARR+G I++G+HA DYLA++GTP +L HA+IGFD T FIRSA + MP Sbjct: 153 QDALVARRVGEIDVGLHARDDYLARNGTPSTTGELAHHALIGFDTVTPFIRSAGRGMPLW 212 Query: 121 RRSQFALRTSSDIAQLAMIRAGYGIGFCQTPLARRDASLVRVLAKQFSFALETWVVMHED 180 R FALRT S++AQLAMIRAGYGIGFCQ LA+RDA LVRVL + LETWVVMHED Sbjct: 213 NRDAFALRTDSNLAQLAMIRAGYGIGFCQNGLAKRDARLVRVLPDGPTMKLETWVVMHED 272 Query: 181 LRNSARVRVAFDALAAGLQEYIN 203 LR S R R FDALA GL+ Y + Sbjct: 273 LRTSPRCRAVFDALANGLRAYAD 295