BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0083.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752678.1| aliphatic sulfonates family ABC transporter ... 478 e-133 ref|YP_004154980.1| aliphatic sulfonates family ABC transporter ... 423 e-116 ref|YP_003775007.1| alkanesulfonates ABC transporter periplasmic... 419 e-115 ref|YP_002944864.1| aliphatic sulfonates family ABC transporter ... 413 e-113 ref|ZP_04764599.1| aliphatic sulfonates family ABC transporter, ... 411 e-113 >ref|YP_004752678.1| aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein [Collimonas fungivorans Ter331] gb|AEK61855.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Collimonas fungivorans Ter331] Length = 343 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/314 (73%), Positives = 273/314 (86%), Gaps = 6/314 (1%) Query: 26 RRNVLKGGAGFSALTAFTALTSLFPLSASAATRELRIGYQKGLLSLLKGRGTLEKRLAPL 85 RR +L+ G G +A+ A T P + AA RELR+GYQKGLLSLLK RGTLE+RLAPL Sbjct: 30 RRRLLQAGIGMAAVAALT------PFAVRAAQRELRVGYQKGLLSLLKKRGTLEQRLAPL 83 Query: 86 GVSIKWIEFSAGPVQLEALSVGSIDFGDVGEAPPIFSQAAGSPLVYVAATVSRPGLEGIL 145 GV++KWIEFSAGPVQLEAL+VGSIDFGDVGEAPPIF+QA G+P+VYVAATV RP +E +L Sbjct: 84 GVAVKWIEFSAGPVQLEALNVGSIDFGDVGEAPPIFAQANGTPIVYVAATVPRPAVEAVL 143 Query: 146 LPAGSAIKSVADLKGKKIALNKGSNVHYFLVKLLEKSGLRYADVNPVWLSPADARAAFEK 205 +PA SAI++VADLKGKKIALNKGSNVHYFLVKLL+K+GL Y+DVN VWL+PADARAAFEK Sbjct: 144 VPATSAIRAVADLKGKKIALNKGSNVHYFLVKLLQKNGLNYSDVNLVWLAPADARAAFEK 203 Query: 206 GAIDAWAIWEPYLAAAQSTLSAQILADANGVVKNRAYYFSSKDYAQKNKDVINLIIDELN 265 G +DAW IWEP+ AAA+ TL+A+ILADA GVVKNRAYYFSSKDYAQKN DV+++ ++ELN Sbjct: 204 GVVDAWVIWEPFFAAAEQTLAARILADAGGVVKNRAYYFSSKDYAQKNGDVLSIAVEELN 263 Query: 266 QIDVWAKANHAALSAELSTVLGLPKPVVDIMVGRYSFGTEPITGAILAEQQRIADTFFDL 325 +ID+W KAN + L+AELS V GLPKPVVD++V R SFGTEPI +ILAEQQ IADTFF+L Sbjct: 264 KIDIWGKANRSELAAELSAVWGLPKPVVDVLVARSSFGTEPINRSILAEQQVIADTFFEL 323 Query: 326 KLIPRKIDVKEAAP 339 KLIPR+IDV++AAP Sbjct: 324 KLIPRQIDVRDAAP 337 >ref|YP_004154980.1| aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein [Variovorax paradoxus EPS] gb|ADU36869.1| aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein [Variovorax paradoxus EPS] Length = 318 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 207/313 (66%), Positives = 250/313 (79%), Gaps = 7/313 (2%) Query: 26 RRNVLKGGAGFSALTAFTALTSLFPLSASAATRELRIGYQKGLLSLLKGRGTLEKRLAPL 85 RR +++G A AL +F AL A A R+ RIG QKG L++LKGRGTLEKRLAPL Sbjct: 8 RRRLIQGAAAAIALPSFAAL-------AQAPARQFRIGNQKGTLNILKGRGTLEKRLAPL 60 Query: 86 GVSIKWIEFSAGPVQLEALSVGSIDFGDVGEAPPIFSQAAGSPLVYVAATVSRPGLEGIL 145 GV++KW EF+AGPVQLEAL+VGSIDFGDVGEAPPIF+QAAG+PL YVAAT RP E +L Sbjct: 61 GVTVKWTEFTAGPVQLEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVAATQHRPQTEAVL 120 Query: 146 LPAGSAIKSVADLKGKKIALNKGSNVHYFLVKLLEKSGLRYADVNPVWLSPADARAAFEK 205 +P GSAIK+VADLKGKKIALNKGSNVHYF+VKL EK GL YAD+N +L P+DARAAFEK Sbjct: 121 VPKGSAIKTVADLKGKKIALNKGSNVHYFIVKLFEKHGLSYADLNLAYLPPSDARAAFEK 180 Query: 206 GAIDAWAIWEPYLAAAQSTLSAQILADANGVVKNRAYYFSSKDYAQKNKDVINLIIDELN 265 G++DAW IW+P+LAAA+ ++ A+ILADA GVV NRAYYFSS DY KN DVI + ++E+N Sbjct: 181 GSVDAWVIWDPFLAAAEKSIDARILADATGVVGNRAYYFSSLDYVAKNADVIAIAVEEIN 240 Query: 266 QIDVWAKANHAALSAELSTVLGLPKPVVDIMVGRYSFGTEPITGAILAEQQRIADTFFDL 325 +++ W AN L+AEL+ + GLPKPV DI R +G PIT AILAEQQ+IADTFF+L Sbjct: 241 KVEAWGSANKGQLAAELAALWGLPKPVADITTARTPYGITPITKAILAEQQKIADTFFEL 300 Query: 326 KLIPRKIDVKEAA 338 KLIP+KI+V EAA Sbjct: 301 KLIPKKINVLEAA 313 >ref|YP_003775007.1| alkanesulfonates ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63099.1| ABC-type alkanesulfonates transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/290 (67%), Positives = 243/290 (83%) Query: 54 SAATRELRIGYQKGLLSLLKGRGTLEKRLAPLGVSIKWIEFSAGPVQLEALSVGSIDFGD 113 +AA R+LR+GYQKG LSL++ G LE+RLAPLG ++KW+EFSAGPVQLEAL GSIDFGD Sbjct: 47 AAAPRQLRVGYQKGALSLIRAHGVLEQRLAPLGATVKWVEFSAGPVQLEALGAGSIDFGD 106 Query: 114 VGEAPPIFSQAAGSPLVYVAATVSRPGLEGILLPAGSAIKSVADLKGKKIALNKGSNVHY 173 VGEAPPIF+QAAG+PLVYV ATV RP +E +L+ S ++ LKGK+IALNKGSNVHY Sbjct: 107 VGEAPPIFAQAAGTPLVYVGATVPRPYVEAVLVKDDSELQRPQQLKGKRIALNKGSNVHY 166 Query: 174 FLVKLLEKSGLRYADVNPVWLSPADARAAFEKGAIDAWAIWEPYLAAAQSTLSAQILADA 233 FLVKLLEK GL+Y DV PVWL+PADARAAFE+GA+DAWAIWEPYLAAAQ L A+ILADA Sbjct: 167 FLVKLLEKHGLKYGDVTPVWLAPADARAAFERGAVDAWAIWEPYLAAAQQGLKARILADA 226 Query: 234 NGVVKNRAYYFSSKDYAQKNKDVINLIIDELNQIDVWAKANHAALSAELSTVLGLPKPVV 293 +GVVKNRAYYFS++DYA+ + D++ + ++EL +ID WA+A ++EL+ +LGLP+ V+ Sbjct: 227 DGVVKNRAYYFSTRDYARDHADLLRIALEELGKIDAWAQARPDEYASELAGILGLPRSVL 286 Query: 294 DIMVGRYSFGTEPITGAILAEQQRIADTFFDLKLIPRKIDVKEAAPPWLA 343 D++V RY +GT PIT AIL EQQ+IADTF DL+LIPRKI + EAAPPWLA Sbjct: 287 DVVVRRYHYGTLPITRAILDEQQQIADTFLDLRLIPRKISLLEAAPPWLA 336 >ref|YP_002944864.1| aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein [Variovorax paradoxus S110] gb|ACS19598.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Variovorax paradoxus S110] Length = 319 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 203/321 (63%), Positives = 259/321 (80%), Gaps = 8/321 (2%) Query: 19 VSAVNSLRRNVLKGGAGFSA-LTAFTALTSLFPLSASAATRELRIGYQKGLLSLLKGRGT 77 +++++ RR +L+G A + L +F AL A A R+LRIG+QKG LS+LKGRGT Sbjct: 1 MTSISIPRRRLLQGAAAAAIALPSFAAL-------AQAPARQLRIGHQKGALSILKGRGT 53 Query: 78 LEKRLAPLGVSIKWIEFSAGPVQLEALSVGSIDFGDVGEAPPIFSQAAGSPLVYVAATVS 137 LEKRLAPLGV++KW EF+AGPVQLEAL+VGSIDFGDVGEAPPIF+QAAG+PL YVA T+ Sbjct: 54 LEKRLAPLGVAVKWTEFTAGPVQLEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVATTLP 113 Query: 138 RPGLEGILLPAGSAIKSVADLKGKKIALNKGSNVHYFLVKLLEKSGLRYADVNPVWLSPA 197 RP E +L+P GSAI++VA+LKGKK+ALNKGSNVHYF+ KL+EK GL Y+D+N V+L PA Sbjct: 114 RPQSEAVLVPKGSAIRTVAELKGKKVALNKGSNVHYFIAKLIEKHGLAYSDLNLVFLPPA 173 Query: 198 DARAAFEKGAIDAWAIWEPYLAAAQSTLSAQILADANGVVKNRAYYFSSKDYAQKNKDVI 257 DARAAFEKG++DAW IW+P+LAAA+ +L A++LADA GVV NR YYFSS YA KN DV+ Sbjct: 174 DARAAFEKGSVDAWVIWDPFLAAAEKSLEARVLADATGVVGNRGYYFSSLGYAAKNADVL 233 Query: 258 NLIIDELNQIDVWAKANHAALSAELSTVLGLPKPVVDIMVGRYSFGTEPITGAILAEQQR 317 + I+E+N++DVW A+ L+AE + + GLPKPV ++ V R ++GT PI+ A+LAEQQ+ Sbjct: 234 AIAIEEINKVDVWGTAHKDDLAAEFAALWGLPKPVAELTVARAAYGTSPISKAVLAEQQK 293 Query: 318 IADTFFDLKLIPRKIDVKEAA 338 IADTFFDLKLIPR+I V EAA Sbjct: 294 IADTFFDLKLIPRRISVLEAA 314 >ref|ZP_04764599.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Acidovorax delafieldii 2AN] gb|EER58601.1| aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [Acidovorax delafieldii 2AN] Length = 321 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/290 (69%), Positives = 240/290 (82%) Query: 50 PLSASAATRELRIGYQKGLLSLLKGRGTLEKRLAPLGVSIKWIEFSAGPVQLEALSVGSI 109 P+ A A R LR+G+QKG LS+LKGRGTLEKRLAPLGV + W EF+AGPVQLEAL+VGSI Sbjct: 28 PVFAQAPGRVLRVGHQKGWLSILKGRGTLEKRLAPLGVKVTWTEFNAGPVQLEALNVGSI 87 Query: 110 DFGDVGEAPPIFSQAAGSPLVYVAATVSRPGLEGILLPAGSAIKSVADLKGKKIALNKGS 169 DFGDVGEAPPIF+QAAG+PLVY ATV RP LE +++P SAI+SVADLKGK++A NKGS Sbjct: 88 DFGDVGEAPPIFAQAAGAPLVYAGATVPRPALEAVIVPRDSAIRSVADLKGKRVAYNKGS 147 Query: 170 NVHYFLVKLLEKSGLRYADVNPVWLSPADARAAFEKGAIDAWAIWEPYLAAAQSTLSAQI 229 NV YFLVKLLEK+GL+Y DV V+L+PADARAAFEKGA+DAW IW+P+LAAAQ TL A++ Sbjct: 148 NVQYFLVKLLEKNGLKYGDVQSVFLAPADARAAFEKGAVDAWIIWDPFLAAAQKTLDARL 207 Query: 230 LADANGVVKNRAYYFSSKDYAQKNKDVINLIIDELNQIDVWAKANHAALSAELSTVLGLP 289 LADA GVV NRAYYF+S+D+A +N DV+ + I+E+N ID WA N AA +AELS VLGL Sbjct: 208 LADATGVVNNRAYYFTSRDFATRNADVLRIAIEEVNAIDTWASKNQAAAAAELSAVLGLD 267 Query: 290 KPVVDIMVGRYSFGTEPITGAILAEQQRIADTFFDLKLIPRKIDVKEAAP 339 K + + VGR FGT P+T ILAEQQ IADTFFDLKLIPRK+++ AAP Sbjct: 268 KGITGLYVGRAKFGTAPVTREILAEQQAIADTFFDLKLIPRKLNLLHAAP 317