BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0068.p (366 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002947396.1| ABC transporter related [Variovorax paradoxu... 453 e-125 ref|ZP_03571013.1| sn-glycerol-3-phosphate import ATP-binding pr... 433 e-119 ref|ZP_02382953.1| ABC transporter related protein [Burkholderia... 431 e-119 ref|ZP_03585871.1| sn-glycerol-3-phosphate import ATP-binding pr... 431 e-118 ref|YP_001579746.1| ABC transporter-like protein [Burkholderia m... 430 e-118 >ref|YP_002947396.1| ABC transporter related [Variovorax paradoxus S110] gb|ACS22130.1| ABC transporter related [Variovorax paradoxus S110] Length = 366 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/367 (62%), Positives = 275/367 (74%), Gaps = 6/367 (1%) Query: 1 MKPDFKTLRLDRVTRRFGGPAKTTDAPQIAALDGLQMDIARGEFIALLGPSGCGKSTALN 60 M DF LRLD VTRRF A AL+ L M + RGEFIALLGPSGCGKSTALN Sbjct: 1 MTSDFSELRLDGVTRRF---AAGKGVQSFTALNALTMTVKRGEFIALLGPSGCGKSTALN 57 Query: 61 CIAGLLPLSDGGIYLDDHRIDTLPPEQRGFGMVFQNYALFPHMTVAKNVGFGLLMRGVPA 120 C+AGLLPL+DGGI+LDD RID LPPE+RGFGMVFQNYALFPHM+VA+NV FGL MRGVP+ Sbjct: 58 CLAGLLPLTDGGIWLDDTRIDVLPPEKRGFGMVFQNYALFPHMSVARNVAFGLAMRGVPS 117 Query: 121 AEIQTRVKRALDLVQLAQHMNKLPGQLSGGQQQRVAIARAIVIEPPLILMDEPLSNLDAK 180 AE RVKRALDLVQL +KLPGQLSGGQQQRVAIARAIVIEPPL+LMDEPLSNLDAK Sbjct: 118 AESAQRVKRALDLVQLNSQAHKLPGQLSGGQQQRVAIARAIVIEPPLVLMDEPLSNLDAK 177 Query: 181 LRLEMRSEIRRIHGELGRTTLYVTHDQDEALSLADRIVVMKDGKVQQIGTPPEVYGQPSN 240 LRLEMR+EIRRIH ELGR+T+YVTHDQDEALSLADR+VVMKDG QQI P +Y +P+N Sbjct: 178 LRLEMRAEIRRIHRELGRSTIYVTHDQDEALSLADRVVVMKDGVAQQIAEPQRIYAEPAN 237 Query: 241 LAVARFMGYRNELILDVVGQDARTVTLAGPGVNLAGIAKMRL-NGRAAVSIRPEEFSICA 299 L VARFMGYRN + LDV + +V LAG G+ L A L +G+A ++IRPEEF + + Sbjct: 238 LDVARFMGYRNLVELDVRSEGGASVQLAGSGLALNARAMQPLASGKAMLAIRPEEFDVVS 297 Query: 300 DGTAPDNSISARVESVEYYGRESLFMLRTQDNTRLYVRAEGKASPGETIRVSVPADRVLA 359 + DNS +ARV +VEY G +++ + +L VR + G+ + +++ D+ LA Sbjct: 298 --SPVDNSFAARVLNVEYCGHDNIVDVEVAGGLKLIVRTTARLRVGDPVMLAIAPDKALA 355 Query: 360 YPFEQVA 366 YP + A Sbjct: 356 YPVDAAA 362 >ref|ZP_03571013.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC [Burkholderia multivorans CGD2M] ref|ZP_03577492.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC [Burkholderia multivorans CGD2] gb|EEE07762.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC [Burkholderia multivorans CGD2] gb|EEE14300.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC [Burkholderia multivorans CGD2M] Length = 359 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 227/362 (62%), Positives = 268/362 (74%), Gaps = 8/362 (2%) Query: 1 MKPDFKTLRLDRVTRRFGGPAKTTDAPQIAALDGLQMDIARGEFIALLGPSGCGKSTALN 60 MK F+ LRLD V R F + Q+AAL+GL +DI RGEFIALLGPSGCGKSTALN Sbjct: 1 MKHSFERLRLDGVCRSF----TNAEGAQVAALNGLDLDIRRGEFIALLGPSGCGKSTALN 56 Query: 61 CIAGLLPLSDGGIYLDDHRIDTLPPEQRGFGMVFQNYALFPHMTVAKNVGFGLLMRGVPA 120 CIAGL PL+ GGI+LDD RID LPPE+RGFGMVFQNYALFPHMTV NVGFGL MRGVP Sbjct: 57 CIAGLQPLTRGGIWLDDTRIDVLPPERRGFGMVFQNYALFPHMTVLDNVGFGLKMRGVPK 116 Query: 121 AEIQTRVKRALDLVQLAQHMNKLPGQLSGGQQQRVAIARAIVIEPPLILMDEPLSNLDAK 180 E ++R ++AL+LVQL H KLPGQLSGGQQQRVAIARAIVIEPPL+LMDEPLSNLD K Sbjct: 117 HEARSRAQQALELVQLVGHEGKLPGQLSGGQQQRVAIARAIVIEPPLVLMDEPLSNLDTK 176 Query: 181 LRLEMRSEIRRIHGELGRTTLYVTHDQDEALSLADRIVVMKDGKVQQIGTPPEVYGQPSN 240 LR+EMR+EIRRIH +L R T+YVTHDQDEALS+ADRIVVMK+G VQQ+ +P EVY +P N Sbjct: 177 LRIEMRAEIRRIHTQLERATIYVTHDQDEALSMADRIVVMKEGVVQQVASPKEVYTRPHN 236 Query: 241 LAVARFMGYRNELILDVVGQDARTVTLAGPGVNLAGIAKMRLNGRA-AVSIRPEEFSICA 299 L VARFMGYRN L + G VT+A GV LAG+ +G+A AV++RP++ A Sbjct: 237 LHVARFMGYRNVLPFTLEGMAGDYVTVAAAGVRLAGVPMAGFDGKAVAVALRPDDIE-RA 295 Query: 300 DGTAPDNSISARVESVEYYGRESLFMLRTQDNTRLYVRAEGKASPGETIRVSVPADRVLA 359 D A DN+ A VE+VEY GR+SL ++ R G+ +PGE + + V R L Sbjct: 296 DAAA-DNTFEATVETVEYGGRDSLIRALAPFGA-IWARVAGEFAPGERLTLRVAPSRTLV 353 Query: 360 YP 361 YP Sbjct: 354 YP 355 >ref|ZP_02382953.1| ABC transporter related protein [Burkholderia ubonensis Bu] Length = 359 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/364 (61%), Positives = 264/364 (72%), Gaps = 8/364 (2%) Query: 1 MKPDFKTLRLDRVTRRFGGPAKTTDAPQIAALDGLQMDIARGEFIALLGPSGCGKSTALN 60 MK F+ LRLD V R F Q+AAL GL +DI RGEFIALLGPSGCGKSTALN Sbjct: 1 MKHTFEQLRLDAVCRSF----TNAQGAQVAALSGLDLDIRRGEFIALLGPSGCGKSTALN 56 Query: 61 CIAGLLPLSDGGIYLDDHRIDTLPPEQRGFGMVFQNYALFPHMTVAKNVGFGLLMRGVPA 120 CIAGL PL+ GGI+LDD RID LPPE+RGFGMVFQNYALFPHM+V NVGFGL MRGVP Sbjct: 57 CIAGLQPLTSGGIWLDDERIDVLPPERRGFGMVFQNYALFPHMSVLDNVGFGLKMRGVPR 116 Query: 121 AEIQTRVKRALDLVQLAQHMNKLPGQLSGGQQQRVAIARAIVIEPPLILMDEPLSNLDAK 180 EI+ R + AL+LVQL H KLPGQLSGGQQQRVAIARAIVIEPPL+LMDEPLSNLD K Sbjct: 117 QEIRKRAQEALELVQLVGHEGKLPGQLSGGQQQRVAIARAIVIEPPLVLMDEPLSNLDTK 176 Query: 181 LRLEMRSEIRRIHGELGRTTLYVTHDQDEALSLADRIVVMKDGKVQQIGTPPEVYGQPSN 240 LR+EMR+EIRRIH +L R T+YVTHDQDEALS+ADRIVVMK+G VQQ+ +P EVY +P N Sbjct: 177 LRIEMRAEIRRIHTQLERATIYVTHDQDEALSMADRIVVMKEGVVQQVASPKEVYTRPRN 236 Query: 241 LAVARFMGYRNELILDVVGQDARTVTLAGPGVNLAGIAKMRLNGR-AAVSIRPEEFSICA 299 L VARFMGYRN L + G V +A GV L G+ + + AV++RP++F+ Sbjct: 237 LHVARFMGYRNVLPFTLEGMAGEHVAVAASGVRLTGVPMAGFDRKDVAVALRPDDFARA- 295 Query: 300 DGTAPDNSISARVESVEYYGRESLFMLRTQDNTRLYVRAEGKASPGETIRVSVPADRVLA 359 G A DN+ A VE+VEY GR+SL +++ R G+ GE +R+ +P +R L Sbjct: 296 -GAAEDNAFDATVETVEYGGRDSLIRA-VAPFGKIWARVAGEFGEGERLRLRIPPERTLV 353 Query: 360 YPFE 363 Y E Sbjct: 354 YAGE 357 >ref|ZP_03585871.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC [Burkholderia multivorans CGD1] gb|EED99578.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC [Burkholderia multivorans CGD1] Length = 359 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 227/362 (62%), Positives = 267/362 (73%), Gaps = 8/362 (2%) Query: 1 MKPDFKTLRLDRVTRRFGGPAKTTDAPQIAALDGLQMDIARGEFIALLGPSGCGKSTALN 60 MK F+ LRLD V R F + Q+AAL+GL +DI RGEFIALLGPSGCGKSTALN Sbjct: 1 MKHSFERLRLDGVCRSF----TNAERAQVAALNGLDLDIRRGEFIALLGPSGCGKSTALN 56 Query: 61 CIAGLLPLSDGGIYLDDHRIDTLPPEQRGFGMVFQNYALFPHMTVAKNVGFGLLMRGVPA 120 CIAGL PL+ GGI+LDD RID LPPE+RGFGMVFQNYALFPHMTV NVGFGL MRGVP Sbjct: 57 CIAGLQPLTRGGIWLDDTRIDVLPPERRGFGMVFQNYALFPHMTVLDNVGFGLKMRGVPK 116 Query: 121 AEIQTRVKRALDLVQLAQHMNKLPGQLSGGQQQRVAIARAIVIEPPLILMDEPLSNLDAK 180 E + R ++AL+LVQL H KLPGQLSGGQQQRVAIARAIVIEPPL+LMDEPLSNLD K Sbjct: 117 QEARRRAQQALELVQLVGHEGKLPGQLSGGQQQRVAIARAIVIEPPLVLMDEPLSNLDTK 176 Query: 181 LRLEMRSEIRRIHGELGRTTLYVTHDQDEALSLADRIVVMKDGKVQQIGTPPEVYGQPSN 240 LR+EMR+EIRRIH +L R T+YVTHDQDEALS+ADRIVVMK+G VQQ+ +P EVY +P N Sbjct: 177 LRIEMRAEIRRIHTQLERATIYVTHDQDEALSVADRIVVMKEGVVQQVASPKEVYTRPHN 236 Query: 241 LAVARFMGYRNELILDVVGQDARTVTLAGPGVNLAGIAKMRLNGRA-AVSIRPEEFSICA 299 L VARFMGYRN L + G VT+A GV LAG+ +G+A AV++RP++ A Sbjct: 237 LHVARFMGYRNVLPFTLEGMAGDYVTVAAAGVRLAGVPMAGFDGKAVAVALRPDDIE-RA 295 Query: 300 DGTAPDNSISARVESVEYYGRESLFMLRTQDNTRLYVRAEGKASPGETIRVSVPADRVLA 359 D A DN+ A VE+VEY GR+SL ++ R G+ +PGE + + V R L Sbjct: 296 DAAA-DNTFEATVETVEYGGRDSLIRALAPFGA-IWARVAGEFAPGERLTLRVAPSRTLV 353 Query: 360 YP 361 YP Sbjct: 354 YP 355 >ref|YP_001579746.1| ABC transporter-like protein [Burkholderia multivorans ATCC 17616] ref|YP_001946140.1| sulfate-transporting ATPase [Burkholderia multivorans ATCC 17616] gb|ABX15249.1| ABC transporter related [Burkholderia multivorans ATCC 17616] dbj|BAG43604.1| sulfate-transporting ATPase [Burkholderia multivorans ATCC 17616] Length = 359 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 226/362 (62%), Positives = 267/362 (73%), Gaps = 8/362 (2%) Query: 1 MKPDFKTLRLDRVTRRFGGPAKTTDAPQIAALDGLQMDIARGEFIALLGPSGCGKSTALN 60 MK F+ LRLD V R F + Q+AAL+GL ++I RGEFIALLGPSGCGKSTALN Sbjct: 1 MKHSFERLRLDGVCRSF----TNAEGAQVAALNGLDLEIRRGEFIALLGPSGCGKSTALN 56 Query: 61 CIAGLLPLSDGGIYLDDHRIDTLPPEQRGFGMVFQNYALFPHMTVAKNVGFGLLMRGVPA 120 CIAGL PL+ GGI+LDD RID LPPE+RGFGMVFQNYALFPHMTV NVGFGL MRGVP Sbjct: 57 CIAGLQPLTRGGIWLDDTRIDVLPPERRGFGMVFQNYALFPHMTVLDNVGFGLKMRGVPK 116 Query: 121 AEIQTRVKRALDLVQLAQHMNKLPGQLSGGQQQRVAIARAIVIEPPLILMDEPLSNLDAK 180 E + R ++AL+LVQL H KLPGQLSGGQQQRVAIARAIVIEPPL+LMDEPLSNLD K Sbjct: 117 QEARRRAQQALELVQLVGHEGKLPGQLSGGQQQRVAIARAIVIEPPLVLMDEPLSNLDTK 176 Query: 181 LRLEMRSEIRRIHGELGRTTLYVTHDQDEALSLADRIVVMKDGKVQQIGTPPEVYGQPSN 240 LR+EMR+EIRRIH +L R T+YVTHDQDEALS+ADRIVVMK+G VQQ+ +P EVY +P N Sbjct: 177 LRIEMRAEIRRIHTQLERATIYVTHDQDEALSMADRIVVMKEGVVQQVASPKEVYTRPHN 236 Query: 241 LAVARFMGYRNELILDVVGQDARTVTLAGPGVNLAGIAKMRLNGRA-AVSIRPEEFSICA 299 L VARFMGYRN L + G VT+A GV LAG+ +G+A AV++RP++ A Sbjct: 237 LHVARFMGYRNVLPFTLEGMAGDYVTVAAAGVRLAGVPMAGFDGKAVAVALRPDDIE-RA 295 Query: 300 DGTAPDNSISARVESVEYYGRESLFMLRTQDNTRLYVRAEGKASPGETIRVSVPADRVLA 359 D A DN+ A VE+VEY GR+SL ++ R G+ +PGE + + V R L Sbjct: 296 DAAA-DNTFEATVETVEYGGRDSLIRALAPFGA-IWARVAGEFTPGERLTLRVAPSRTLV 353 Query: 360 YP 361 YP Sbjct: 354 YP 355