BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0059.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003694668.1| short-chain dehydrogenase/reductase SDR [Sta... 412 e-113 ref|YP_001413661.1| short-chain dehydrogenase/reductase SDR [Par... 409 e-112 ref|YP_004381287.1| short-chain dehydrogenase/reductase SDR [Pse... 398 e-109 ref|YP_001188700.1| short-chain dehydrogenase/reductase SDR [Pse... 389 e-106 ref|YP_051303.1| short chain dehydrogenase [Pectobacterium atros... 376 e-102 >ref|YP_003694668.1| short-chain dehydrogenase/reductase SDR [Starkeya novella DSM 506] gb|ADH90049.1| short-chain dehydrogenase/reductase SDR [Starkeya novella DSM 506] Length = 251 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 204/250 (81%), Positives = 222/250 (88%) Query: 6 TKITLVTGASRGLGRNTALSIARHGGDVVVTYHSRSDEAQAVVAEIQALGRKAVALQLDT 65 TKITLVTGASRGLGRNTALSIAR GGDVV+TY S+++EA AVVAEI+ALGRKAVAL LDT Sbjct: 2 TKITLVTGASRGLGRNTALSIARRGGDVVLTYRSKAEEAHAVVAEIEALGRKAVALPLDT 61 Query: 66 GDVAAFAPFAERLCAALRDTWSRNSIDHLVNNAGHGDYALIGDTTEAQFDGLVNVHFKGV 125 + A F FAERL ALR+T+ R S HLVNNAGHGD+ALIG+TTEAQFD LVNVHFKGV Sbjct: 62 AEAATFPAFAERLKTALRETFGRESFHHLVNNAGHGDFALIGETTEAQFDALVNVHFKGV 121 Query: 126 YFLTQTLLPLIADGGRIVNLSSGLTRTSFPGYAVYAAAKGAVEVLTRYMAKELGARGIAV 185 +FLTQ LLPL+ADGGRIVNLSSGLTR S PG++ YAAAKGAVEVL+ YMAKELGARGIAV Sbjct: 122 FFLTQALLPLLADGGRIVNLSSGLTRVSAPGWSAYAAAKGAVEVLSLYMAKELGARGIAV 181 Query: 186 NTVAPGAIETDFGGGVVRDNPEINKQFAGLTALGRVGVPDDIGPMIASLLSQDNRWVTAQ 245 NTVAPGAIETDF GG VRD PE NK FA +TALGRVGVPDDIGPMIASLLS+DNRW+ AQ Sbjct: 182 NTVAPGAIETDFFGGAVRDTPEFNKVFADMTALGRVGVPDDIGPMIASLLSEDNRWINAQ 241 Query: 246 RIEVSGGQGI 255 RIEVSGGQGI Sbjct: 242 RIEVSGGQGI 251 >ref|YP_001413661.1| short-chain dehydrogenase/reductase SDR [Parvibaculum lavamentivorans DS-1] gb|ABS64004.1| short-chain dehydrogenase/reductase SDR [Parvibaculum lavamentivorans DS-1] Length = 251 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 209/250 (83%), Positives = 225/250 (90%) Query: 6 TKITLVTGASRGLGRNTALSIARHGGDVVVTYHSRSDEAQAVVAEIQALGRKAVALQLDT 65 T I+LVTG SRGLGRNTALSIAR GGDVV+TY S++ EA+AVVAEIQA+GRKA ALQLDT Sbjct: 2 TSISLVTGGSRGLGRNTALSIARRGGDVVLTYRSQAAEAEAVVAEIQAIGRKAAALQLDT 61 Query: 66 GDVAAFAPFAERLCAALRDTWSRNSIDHLVNNAGHGDYALIGDTTEAQFDGLVNVHFKGV 125 GD +AFA FA+RL LRDTW R + DHLVNNAGHGDYALIGDTTEAQFD LV+VHFKGV Sbjct: 62 GDTSAFAAFADRLRKVLRDTWGRETFDHLVNNAGHGDYALIGDTTEAQFDRLVDVHFKGV 121 Query: 126 YFLTQTLLPLIADGGRIVNLSSGLTRTSFPGYAVYAAAKGAVEVLTRYMAKELGARGIAV 185 YFLTQTLLPLIADGGRIVNLSSGLTR S+PGYA YAA KGAVEVLTRYMAKELG RGIAV Sbjct: 122 YFLTQTLLPLIADGGRIVNLSSGLTRLSYPGYAAYAAVKGAVEVLTRYMAKELGGRGIAV 181 Query: 186 NTVAPGAIETDFGGGVVRDNPEINKQFAGLTALGRVGVPDDIGPMIASLLSQDNRWVTAQ 245 NTVAPGAIETDFGGG VRD PE+N+QFA +TALGRVG+PDDIGPMIA LLS +NRWV AQ Sbjct: 182 NTVAPGAIETDFGGGAVRDTPELNRQFAEMTALGRVGLPDDIGPMIAGLLSGENRWVNAQ 241 Query: 246 RIEVSGGQGI 255 RIEVSGGQGI Sbjct: 242 RIEVSGGQGI 251 >ref|YP_004381287.1| short-chain dehydrogenase/reductase SDR [Pseudomonas mendocina NK-01] gb|AEB59535.1| short-chain dehydrogenase/reductase SDR [Pseudomonas mendocina NK-01] Length = 251 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/250 (76%), Positives = 219/250 (87%) Query: 6 TKITLVTGASRGLGRNTALSIARHGGDVVVTYHSRSDEAQAVVAEIQALGRKAVALQLDT 65 TKI +VTG+SRGLGRNTAL+IAR G DVVVTYHS++D AQAVVAEIQALGRKAVALQLD Sbjct: 2 TKIAIVTGSSRGLGRNTALNIARQGIDVVVTYHSQADTAQAVVAEIQALGRKAVALQLDA 61 Query: 66 GDVAAFAPFAERLCAALRDTWSRNSIDHLVNNAGHGDYALIGDTTEAQFDGLVNVHFKGV 125 GDV+ F+ F +RL AL +TW R+S DHL+NNAGHGD A I +TTEAQFD LVNVHFKGV Sbjct: 62 GDVSTFSAFVQRLRQALNETWHRDSFDHLINNAGHGDMASITNTTEAQFDALVNVHFKGV 121 Query: 126 YFLTQTLLPLIADGGRIVNLSSGLTRTSFPGYAVYAAAKGAVEVLTRYMAKELGARGIAV 185 +FLTQ LLPL+ADGGRIVN+SSGLTR S+PG++ Y+A KGAVEVL+ YMAKELG+RGIAV Sbjct: 122 FFLTQALLPLMADGGRIVNISSGLTRVSYPGFSAYSAVKGAVEVLSLYMAKELGSRGIAV 181 Query: 186 NTVAPGAIETDFGGGVVRDNPEINKQFAGLTALGRVGVPDDIGPMIASLLSQDNRWVTAQ 245 NTVAPGAIETDF GG VRD P++NK FA +TALGRVGVPDDIGPMIA+LL + NRW+ AQ Sbjct: 182 NTVAPGAIETDFLGGAVRDMPDLNKVFAEMTALGRVGVPDDIGPMIANLLGEQNRWINAQ 241 Query: 246 RIEVSGGQGI 255 RIEVSGGQ I Sbjct: 242 RIEVSGGQAI 251 >ref|YP_001188700.1| short-chain dehydrogenase/reductase SDR [Pseudomonas mendocina ymp] gb|ABP85968.1| short-chain dehydrogenase/reductase SDR [Pseudomonas mendocina ymp] Length = 251 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 191/250 (76%), Positives = 214/250 (85%) Query: 6 TKITLVTGASRGLGRNTALSIARHGGDVVVTYHSRSDEAQAVVAEIQALGRKAVALQLDT 65 TKI +VTG+SRGLGRNTAL+IAR G DV+VTYHS++D A A+VAEI+ALGRKAVALQLD Sbjct: 2 TKIAIVTGSSRGLGRNTALNIARQGSDVIVTYHSQADAALALVAEIEALGRKAVALQLDV 61 Query: 66 GDVAAFAPFAERLCAALRDTWSRNSIDHLVNNAGHGDYALIGDTTEAQFDGLVNVHFKGV 125 GDV+ FA FAE L L TW R+ DHLVNNAGHGD A I +TTEAQFD LVNVHFKGV Sbjct: 62 GDVSTFAAFAETLRGVLAQTWQRDRFDHLVNNAGHGDMATIAETTEAQFDALVNVHFKGV 121 Query: 126 YFLTQTLLPLIADGGRIVNLSSGLTRTSFPGYAVYAAAKGAVEVLTRYMAKELGARGIAV 185 +FLTQ LLPLIADGGRIVNLS+GLTR + PG++ YAAAKGAVEVL+ YMAKELG+RGIAV Sbjct: 122 FFLTQALLPLIADGGRIVNLSTGLTRFASPGFSAYAAAKGAVEVLSVYMAKELGSRGIAV 181 Query: 186 NTVAPGAIETDFGGGVVRDNPEINKQFAGLTALGRVGVPDDIGPMIASLLSQDNRWVTAQ 245 NTVAPGAIETDF GG VRD P++N+ FA +TALGRVGVPDDIGPMIA LL + NRWV AQ Sbjct: 182 NTVAPGAIETDFLGGAVRDTPDLNQVFAQMTALGRVGVPDDIGPMIAGLLGEQNRWVNAQ 241 Query: 246 RIEVSGGQGI 255 RIEVSGGQ I Sbjct: 242 RIEVSGGQAI 251 >ref|YP_051303.1| short chain dehydrogenase [Pectobacterium atrosepticum SCRI1043] emb|CAG76112.1| probable short chain dehydrogenase [Pectobacterium atrosepticum SCRI1043] Length = 251 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 178/250 (71%), Positives = 214/250 (85%) Query: 6 TKITLVTGASRGLGRNTALSIARHGGDVVVTYHSRSDEAQAVVAEIQALGRKAVALQLDT 65 +KITLVTGA+RGLGRNTALSIA GGDV+VTY +++A+ VV EIQ+LGRKAVA+QLD Sbjct: 2 SKITLVTGANRGLGRNTALSIAERGGDVIVTYRGNTEQAKEVVDEIQSLGRKAVAVQLDV 61 Query: 66 GDVAAFAPFAERLCAALRDTWSRNSIDHLVNNAGHGDYALIGDTTEAQFDGLVNVHFKGV 125 G+ A+F F + L L + W R++ DHLVNNAGHG++++I DTTEAQFDGL +VH KG+ Sbjct: 62 GNSASFPTFTKSLRPLLSEIWDRDTFDHLVNNAGHGEFSMITDTTEAQFDGLFDVHVKGM 121 Query: 126 YFLTQTLLPLIADGGRIVNLSSGLTRTSFPGYAVYAAAKGAVEVLTRYMAKELGARGIAV 185 +FL QTLLPL+ADGGRI+N SSGLTR S+PG++ Y+AAK AVE+L+ YMA+ELG RGI V Sbjct: 122 FFLVQTLLPLLADGGRIINFSSGLTRVSYPGFSAYSAAKAAVEMLSVYMARELGPRGITV 181 Query: 186 NTVAPGAIETDFGGGVVRDNPEINKQFAGLTALGRVGVPDDIGPMIASLLSQDNRWVTAQ 245 NTVAPGAIETDFGGG+VRDN ++N QFA +TALGRVGVPDDIGPMIASLL +DNRWVTAQ Sbjct: 182 NTVAPGAIETDFGGGLVRDNADVNAQFATMTALGRVGVPDDIGPMIASLLREDNRWVTAQ 241 Query: 246 RIEVSGGQGI 255 RIEVSGGQ I Sbjct: 242 RIEVSGGQTI 251