BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0054.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352431.1| sulfonate/nitrate transport system permease ... 390 e-107 ref|YP_004753676.1| alkanesulfonates transport system permease [... 389 e-106 ref|YP_003775071.1| alkanesulfonates ABC transporter permease [H... 389 e-106 ref|YP_004685964.1| TauT family ABC transporter permease [Cupria... 368 e-100 ref|ZP_08504072.1| Putative aliphatic sulfonates transport perme... 368 e-100 >ref|YP_001352431.1| sulfonate/nitrate transport system permease protein [Janthinobacterium sp. Marseille] gb|ABR88768.1| sulfonate/nitrate transport system permease protein [Janthinobacterium sp. Marseille] Length = 276 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/273 (79%), Positives = 243/273 (89%), Gaps = 3/273 (1%) Query: 8 PTVDTPRKIAAAKSSGSGSSNGFGATQLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWA 67 PT+ TP AA S +S G +L+ W +PV LI VWQIA+QLGWLSSRILPEP+A Sbjct: 6 PTLATPGAAAAKAPSTWRAS---GLKKLVPWIVPVLLISVWQIASQLGWLSSRILPEPFA 62 Query: 68 VLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMV 127 V +AAW L++SGELWTH+ VS RA + FAVGGGLGLLLGLLTGTF+ AE LLDTTLQM+ Sbjct: 63 VAKAAWELALSGELWTHVKVSLWRATTSFAVGGGLGLLLGLLTGTFKTAETLLDTTLQMI 122 Query: 128 RNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLS 187 RNIPALALIPL+ILWFGI+ETSK+FLV+VGVFFP+YLNTFHGIRSVDKGLIEMAKSYGLS Sbjct: 123 RNIPALALIPLVILWFGIEETSKIFLVAVGVFFPVYLNTFHGIRSVDKGLIEMAKSYGLS 182 Query: 188 GWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVV 247 GW LYRDVILPGALPSILVGVRF+LGLVWVLLIVAETISAQ+GIGYMTMNAREFLQTDVV Sbjct: 183 GWSLYRDVILPGALPSILVGVRFSLGLVWVLLIVAETISAQSGIGYMTMNAREFLQTDVV 242 Query: 248 LVGILLYALLGKLADVLARSLEKFWLRWHPGYQ 280 LVGILLYALLGKLADV++R+LE +WLRWHPGY+ Sbjct: 243 LVGILLYALLGKLADVVSRTLEGYWLRWHPGYR 275 >ref|YP_004753676.1| alkanesulfonates transport system permease [Collimonas fungivorans Ter331] gb|AEK62853.1| Alkanesulfonates transport system permease protein [Collimonas fungivorans Ter331] Length = 277 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/233 (88%), Positives = 224/233 (96%) Query: 48 WQIAAQLGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLG 107 W+ AA++GWLSSRILPEPWAV RAAW+L++SGELWTH+ VS RA SGFAVGGGLGLLLG Sbjct: 45 WEFAAKVGWLSSRILPEPWAVARAAWSLTLSGELWTHVRVSAWRAISGFAVGGGLGLLLG 104 Query: 108 LLTGTFRQAEVLLDTTLQMVRNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTF 167 LLTGTF+QAE LLDT++QM+RNIPALALIPL+ILWFGIDE+SKLFLVS+GVFFP+YLNTF Sbjct: 105 LLTGTFKQAETLLDTSIQMIRNIPALALIPLVILWFGIDESSKLFLVSIGVFFPVYLNTF 164 Query: 168 HGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISA 227 HGIRSVDKGLIEMAKSYGLSGWPLYRDVILPG LPSILVGVRFALGLVWVLLIVAETISA Sbjct: 165 HGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGGLPSILVGVRFALGLVWVLLIVAETISA 224 Query: 228 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLARSLEKFWLRWHPGYQ 280 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLAD+LAR LE++WLRWHPGYQ Sbjct: 225 QAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADILARLLERYWLRWHPGYQ 277 >ref|YP_003775071.1| alkanesulfonates ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63163.1| ABC-type alkanesulfonates transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 279 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 219/282 (77%), Positives = 244/282 (86%), Gaps = 8/282 (2%) Query: 3 TSIASPT---VDTPRKIAAAKSSGSGSSNGFGATQL-LSWALPVGLIVVWQIAAQLGWLS 58 TS ++P V P++ A K++ F + + W LP+ L+V W++AAQ GWLS Sbjct: 2 TSASNPVAGRVAGPQEQAKPKAA----RKSFQPSHAWIGWLLPLLLLVWWEVAAQAGWLS 57 Query: 59 SRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEV 118 SRILPEP AVL+AAW LS SGELW HL VS+GRAASGFAVG GLGL+LGLL+G+ R AE+ Sbjct: 58 SRILPEPLAVLKAAWELSASGELWRHLAVSSGRAASGFAVGAGLGLILGLLSGSLRSAEL 117 Query: 119 LLDTTLQMVRNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLI 178 LLDTTLQMVRNIPALALIPL+ILWFGIDET+KLFLVSVGVFFP+YLNTFHGIRSVD+GLI Sbjct: 118 LLDTTLQMVRNIPALALIPLVILWFGIDETAKLFLVSVGVFFPVYLNTFHGIRSVDQGLI 177 Query: 179 EMAKSYGLSGWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNA 238 EMAKSYGLSGWPLYRDVILPGALP+ILVG+RFALGLVWVLLIVAETISAQAGIGYMTMNA Sbjct: 178 EMAKSYGLSGWPLYRDVILPGALPAILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNA 237 Query: 239 REFLQTDVVLVGILLYALLGKLADVLARSLEKFWLRWHPGYQ 280 REFLQTDVVLVGILLYALLGKLAD AR LE+FWLRWHPGYQ Sbjct: 238 REFLQTDVVLVGILLYALLGKLADTAARWLERFWLRWHPGYQ 279 >ref|YP_004685964.1| TauT family ABC transporter permease [Cupriavidus necator N-1] gb|AEI77483.1| ABC transport system permease protein TauT family [Cupriavidus necator N-1] Length = 267 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/279 (73%), Positives = 233/279 (83%), Gaps = 15/279 (5%) Query: 1 MSTSIASPTVDTPRKIAAAKSSGSGSSNGFGATQLLSWALPVGLIVVWQIAAQLGWLSSR 60 M+ ++ P P+ +A A L W +PV LIV WQ+A+Q GWLSSR Sbjct: 1 MNAPLSQPPRQAPQALARA---------------LAPWIVPVLLIVAWQLASQNGWLSSR 45 Query: 61 ILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLL 120 +LP P AV++AAW L+ SGELW H+GVST RA GFA+GGGLGLLLGLLTGTFR A LL Sbjct: 46 VLPAPLAVVQAAWELARSGELWKHVGVSTWRALVGFAIGGGLGLLLGLLTGTFRTAATLL 105 Query: 121 DTTLQMVRNIPALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEM 180 D+TLQMVRNIPALALIPL+ILWFGIDET+KLFLVS+GVFFP+YLNT+HGIRSVD GL+EM Sbjct: 106 DSTLQMVRNIPALALIPLVILWFGIDETAKLFLVSLGVFFPVYLNTYHGIRSVDTGLVEM 165 Query: 181 AKSYGLSGWPLYRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNARE 240 A+SYGLSGW LYR+VILPGALP ILVGVRFALGL+WV+LIVAETISAQ+GIGYMTMNARE Sbjct: 166 ARSYGLSGWQLYREVILPGALPGILVGVRFALGLMWVVLIVAETISAQSGIGYMTMNARE 225 Query: 241 FLQTDVVLVGILLYALLGKLADVLARSLEKFWLRWHPGY 279 FLQTDVVLVGILLYALLGKLAD L+R LE++WLRWHPGY Sbjct: 226 FLQTDVVLVGILLYALLGKLADWLSRGLERYWLRWHPGY 264 >ref|ZP_08504072.1| Putative aliphatic sulfonates transport permease protein ssuC [Methyloversatilis universalis FAM5] gb|EGK72620.1| Putative aliphatic sulfonates transport permease protein ssuC [Methyloversatilis universalis FAM5] Length = 263 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 189/247 (76%), Positives = 221/247 (89%) Query: 34 QLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAA 93 +LL W+LP+ L+V+WQ+AAQ GWLSSR+LP P VL+A W L+VSGELW H+ VS RA Sbjct: 15 KLLPWSLPITLLVLWQVAAQTGWLSSRVLPAPLDVLKAFWTLAVSGELWRHVLVSAQRAL 74 Query: 94 SGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIPALALIPLMILWFGIDETSKLFL 153 SGFA+GGGLGLLLGL TG++++ E LLDTT+QM+RNIP LALIPL+ILWFGIDET+KLFL Sbjct: 75 SGFAIGGGLGLLLGLATGSWKRVETLLDTTVQMIRNIPPLALIPLVILWFGIDETAKLFL 134 Query: 154 VSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGALPSILVGVRFALG 213 VS+GVFFP+Y+NTFHGIRSVD GLIEM ++YGL GW LYRD+ILPGALPSILVGVRF+LG Sbjct: 135 VSLGVFFPVYINTFHGIRSVDAGLIEMGRAYGLRGWALYRDIILPGALPSILVGVRFSLG 194 Query: 214 LVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLARSLEKFWL 273 +WV+LIVAETISAQ GIGYMTMNAREFL TDVVLVGILLYALLGKLAD+LAR+LE+ WL Sbjct: 195 FMWVILIVAETISAQEGIGYMTMNAREFLMTDVVLVGILLYALLGKLADLLARTLERVWL 254 Query: 274 RWHPGYQ 280 +WHP YQ Sbjct: 255 QWHPNYQ 261