BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0038.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775057.1| transmembrane protein [Herbaspirillum serope... 345 3e-93 ref|ZP_08272651.1| C-5 sterol desaturase [Oxalobacteraceae bacte... 305 3e-81 ref|YP_004753696.1| putative transmembrane protein [Collimonas f... 285 4e-75 ref|YP_004154114.1| fatty acid hydroxylase [Variovorax paradoxus... 256 2e-66 ref|YP_002943546.1| fatty acid hydroxylase [Variovorax paradoxus... 254 8e-66 >ref|YP_003775057.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63149.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 168/232 (72%), Positives = 191/232 (82%), Gaps = 3/232 (1%) Query: 3 RARWNDFIYTAVHRLGAFSILVFFLLDPLMSTLSEFLHWEGWGTFNLDDVWPGVTDQALV 62 RARWNDFIYT + RLG I+ F LLDP +S LSE LH EGWG+FNLD +WPGVTDQALV Sbjct: 74 RARWNDFIYTVLQRLGVIPIVAFLLLDPALSYLSEALHLEGWGSFNLDQIWPGVTDQALV 133 Query: 63 SFLLYLIVLDFCDYWYHRAQHGVRWLWALHSLHHSQENMNLWSDDRNHLLDDLVRDVLMG 122 SFLLY++VLD C+Y YH AQH VRW+WALHSLHHSQ+NMNLWSDDRNH+LD+L D++ G Sbjct: 134 SFLLYMVVLDLCEYVYHWAQHNVRWMWALHSLHHSQQNMNLWSDDRNHMLDNLFHDIIFG 193 Query: 123 IVALAIGVQPGQYILLVSASRMLQSLQHANVRIHFGRIGEWLLVSPRFHRLHHAIGIGHE 182 ++A+ IGV+P QYILLVS SRMLQSLQHANVRIHFGRIGE+LLVSPRFHR HHA+G+GHE Sbjct: 194 LIAVFIGVEPSQYILLVSLSRMLQSLQHANVRIHFGRIGEYLLVSPRFHRTHHAVGLGHE 253 Query: 183 SRGKNSLGGHNFAVLFPIWDVLFRTRHV--GFPALXARGAI-MAAASGRSNG 231 SRG+NSLGGHNFAVLFPIWDVLFRT H GF R + A GR G Sbjct: 254 SRGRNSLGGHNFAVLFPIWDVLFRTAHFSQGFAMTGVRDQLPPPAGKGRDYG 305 >ref|ZP_08272651.1| C-5 sterol desaturase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33874.1| C-5 sterol desaturase [Oxalobacteraceae bacterium IMCC9480] Length = 327 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 151/232 (65%), Positives = 182/232 (78%), Gaps = 3/232 (1%) Query: 3 RARWNDFIYTAVHRLGAFSILVFFLLDPLMSTLSEFLHWEGWGTFNLDDVWPGVTDQALV 62 RAR DF+YTA+HRLGAF++ VFF+LDPL+ L+ LH EG FNLD +WPGVTD LV Sbjct: 74 RARRIDFLYTAIHRLGAFTVAVFFVLDPLIDHLTGLLHLEGVRPFNLDGLWPGVTDLPLV 133 Query: 63 SFLLYLIVLDFCDYWYHRAQHGVRWLWALHSLHHSQENMNLWSDDRNHLLDDLVRDVLMG 122 +FLLYL VLDF DYWYHR H + W W LH LHHSQ++MNLWSD+RNHLLDD +RD+ M Sbjct: 134 TFLLYLFVLDFFDYWYHRGSHQINWWWGLHGLHHSQQDMNLWSDNRNHLLDDFMRDIYMA 193 Query: 123 IVALAIGVQPGQYILLVSASRMLQSLQHANVRIHFGRIGEWLLVSPRFHRLHHAIGIGHE 182 ++ALAIGV PGQY+LLV+ASR+LQSLQHANV+++FG +GE LLVSPR+HR+HH IGIGHE Sbjct: 194 VIALAIGVPPGQYVLLVAASRILQSLQHANVKLYFGWLGERLLVSPRYHRVHHGIGIGHE 253 Query: 183 SRGKNSLGGHNFAVLFPIWDVLFRTRHV--GFPALXARGAIMAA-ASGRSNG 231 S GK SLGGHNFAVLFP+WD++FRT + F R + A SGR G Sbjct: 254 SYGKGSLGGHNFAVLFPVWDIVFRTANFSESFGPTGIRDQLPAPLGSGRDYG 305 >ref|YP_004753696.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK62873.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 328 Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 143/209 (68%), Positives = 177/209 (84%) Query: 3 RARWNDFIYTAVHRLGAFSILVFFLLDPLMSTLSEFLHWEGWGTFNLDDVWPGVTDQALV 62 RARW DF+YT ++RLGAFS+ VFFL+DPLM+ +E LH +G FNL+++ PG++++ L+ Sbjct: 74 RARWIDFLYTVLYRLGAFSVFVFFLVDPLMAKATELLHLQGINPFNLENLLPGMSERPLL 133 Query: 63 SFLLYLIVLDFCDYWYHRAQHGVRWLWALHSLHHSQENMNLWSDDRNHLLDDLVRDVLMG 122 +FLLYL+VLD C+Y YHRAQH WLW LHSLHHSQ+NMNLWSDDRNHLLD L+ DV+M Sbjct: 134 TFLLYLLVLDLCEYLYHRAQHSFGWLWGLHSLHHSQQNMNLWSDDRNHLLDGLIHDVVMA 193 Query: 123 IVALAIGVQPGQYILLVSASRMLQSLQHANVRIHFGRIGEWLLVSPRFHRLHHAIGIGHE 182 +VALAIGV+P QY+LLVS +RMLQSLQHANVRIHFGR+G+ ++VSPRFHR HHAIGIGHE Sbjct: 194 LVALAIGVEPAQYVLLVSITRMLQSLQHANVRIHFGRLGDAIVVSPRFHRWHHAIGIGHE 253 Query: 183 SRGKNSLGGHNFAVLFPIWDVLFRTRHVG 211 S+G +LGGHNF VLF WDVLFR+ + G Sbjct: 254 SKGTGTLGGHNFGVLFAFWDVLFRSAYFG 282 >ref|YP_004154114.1| fatty acid hydroxylase [Variovorax paradoxus EPS] gb|ADU36003.1| fatty acid hydroxylase [Variovorax paradoxus EPS] Length = 324 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/225 (56%), Positives = 159/225 (70%), Gaps = 2/225 (0%) Query: 8 DFIYTAVHRLGAFSILVFFLLDPLMSTLSEFLHWEGWGTFNLDDVWPGVTDQALVSFLLY 67 D +YT +H+LG F + +FF L P L GWGTF+LD+VWPGVTD +V+F +Y Sbjct: 79 DVLYTLIHKLGLFRLALFFTLQPFFDDALGSLRTAGWGTFHLDEVWPGVTDVPVVAFAIY 138 Query: 68 LIVLDFCDYWYHRAQHGVRWLWALHSLHHSQENMNLWSDDRNHLLDDLVRDVLMGIVALA 127 L+VLDF YW HR QH W W LHSLHHSQ M +WSDDRNHL+DD+V D ++ IVA Sbjct: 139 LVVLDFVGYWIHRGQHQFNWWWGLHSLHHSQRQMTMWSDDRNHLVDDIVHDAIIVIVAQL 198 Query: 128 IGVQPGQYILLVSASRMLQSLQHANVRIHFGRIGEWLLVSPRFHRLHHAIGIGHESRGKN 187 IGV PGQ+I V+ +++ +SLQHAN+R+ FG IGE L VSPRFHRLHH+IG+GHESRGK+ Sbjct: 199 IGVAPGQFIAFVAFTQLSESLQHANLRLSFGAIGERLWVSPRFHRLHHSIGLGHESRGKS 258 Query: 188 SLGGHNFAVLFPIWDVLFRTRHVG--FPALXARGAIMAAASGRSN 230 +LGGHNF VL P WD+LFRT + + R + ASGR+ Sbjct: 259 TLGGHNFGVLLPWWDMLFRTANFEDRYDPTGIRDQVEPDASGRTR 303 >ref|YP_002943546.1| fatty acid hydroxylase [Variovorax paradoxus S110] gb|ACS18280.1| fatty acid hydroxylase [Variovorax paradoxus S110] Length = 324 Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 124/205 (60%), Positives = 152/205 (74%) Query: 3 RARWNDFIYTAVHRLGAFSILVFFLLDPLMSTLSEFLHWEGWGTFNLDDVWPGVTDQALV 62 RA D +YT +HRLG F + +FF L+P FL GWGTF+LD+VWPGVTD V Sbjct: 74 RAIRIDVLYTLIHRLGLFRLAMFFTLEPFFDEGIGFLRTAGWGTFHLDEVWPGVTDVPWV 133 Query: 63 SFLLYLIVLDFCDYWYHRAQHGVRWLWALHSLHHSQENMNLWSDDRNHLLDDLVRDVLMG 122 +F +YL+VLDF YW HR QH RW W LHSLHHSQ M +WSDDRNHLLDD++ D L+ Sbjct: 134 AFAIYLVVLDFVGYWIHRGQHQFRWWWGLHSLHHSQRQMTMWSDDRNHLLDDIIHDTLIV 193 Query: 123 IVALAIGVQPGQYILLVSASRMLQSLQHANVRIHFGRIGEWLLVSPRFHRLHHAIGIGHE 182 IVA IGV PGQ+I V+ +++ +SLQHAN+R+ FG IGE L +SPRFHRLHH+IG+GHE Sbjct: 194 IVAQLIGVAPGQFIAFVAFTQLSESLQHANLRLAFGAIGERLWISPRFHRLHHSIGLGHE 253 Query: 183 SRGKNSLGGHNFAVLFPIWDVLFRT 207 SRG ++LGG NF VL P WD+LFRT Sbjct: 254 SRGAHTLGGCNFGVLLPWWDMLFRT 278