BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0010.0010.p (497 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776968.1| 3-polyprenyl-4-hydroxybenzoate decarboxylase... 923 0.0 ref|YP_004751897.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase... 914 0.0 ref|YP_001354025.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase... 914 0.0 sp|A4G3Y4.2|UBID_HERAR RecName: Full=3-octaprenyl-4-hydroxybenzo... 914 0.0 ref|YP_001099348.1| 3-octaprenyl-4-hydroxybenzoate decarboxylase... 886 0.0 >ref|YP_003776968.1| 3-polyprenyl-4-hydroxybenzoate decarboxylase [Herbaspirillum seropedicae SmR1] gb|ADJ65060.1| 3-polyprenyl-4-hydroxybenzoate decarboxylase protein [Herbaspirillum seropedicae SmR1] Length = 494 Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/497 (88%), Positives = 469/497 (94%), Gaps = 3/497 (0%) Query: 1 MKYSDLRDFISQLQLSGELKRISTPVSPYLEITEICDRTLRASGPALIFDKVEGKNIPVL 60 MKY+DLRDFISQLQ GELKR+S PVS +LE+TEICDRTLRA GPAL+F+ V+ KNIPVL Sbjct: 1 MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEHVDQKNIPVL 60 Query: 61 ANLFGTPRRVALGMGAEDVGELRRIGHLLAKLKEPEPPKGFKDVMGLGTLVKSLWDMAPK 120 ANLFGTP RVALGMGA+++GELRRIGHLLA+LKEPEPPKG KDV+ LG+LVKSLWDMAPK Sbjct: 61 ANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLWDMAPK 120 Query: 121 ERSSAPCQDIVWEGNDVDLDRLPIQHCWPGDVAPLITWGLVITKGPNKKRQNLGIYRQQV 180 ER SAPCQD+VWEG DVDL RLPIQHCWPGD+APLITWGLV+TKGP+KKRQNLGIYRQQV Sbjct: 121 ERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGIYRQQV 180 Query: 181 LGRNKVIMRWLAHRGGALDFREHCIANPGKPYPIAVALGADPATILGAVTPVPDSLSEYQ 240 LG NKVIMRWLAHRGGALDFREHCIANPGKPYP+ VALGADPATILGAVTPVPD+LSEYQ Sbjct: 181 LGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDNLSEYQ 240 Query: 241 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHIYPDSAENPHPSGYEHALEGPYGDHTG 300 FAGLLRGSRTELVKA+GSELRVPASAEIVLEGHIYPD H SG+EHALEGPYGDHTG Sbjct: 241 FAGLLRGSRTELVKAMGSELRVPASAEIVLEGHIYPDEK---HASGFEHALEGPYGDHTG 297 Query: 301 YYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEITD 360 YYNEQDWFPVFTIDRITMRRD IYHSTYTGKPPDEPAVLGVALNEVF+PLLQKQF+EITD Sbjct: 298 YYNEQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITD 357 Query: 361 FYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEV 420 FYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDV+IRDWKEV Sbjct: 358 FYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEV 417 Query: 421 IWAITTRVDPVRDTVMVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETNREWGTTIAM 480 IWAITTRVDPVRDTVMVDNTPIDYLDFASP+SGLGSKMGIDATNKWPGET+REWGT I M Sbjct: 418 IWAITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREWGTPIVM 477 Query: 481 TDAVKKRVDGIWDELGI 497 + VKKRVD IW +LGI Sbjct: 478 DEDVKKRVDAIWQDLGI 494 >ref|YP_004751897.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase [Collimonas fungivorans Ter331] gb|AEK61074.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase [Collimonas fungivorans Ter331] Length = 494 Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/497 (88%), Positives = 466/497 (93%), Gaps = 3/497 (0%) Query: 1 MKYSDLRDFISQLQLSGELKRISTPVSPYLEITEICDRTLRASGPALIFDKVEGKNIPVL 60 MKYSDLRDFI +L+ GELKRISTP+SPYLE+TEICDRTLRA+GPAL+F+ G +IPVL Sbjct: 1 MKYSDLRDFIVKLEQIGELKRISTPISPYLEMTEICDRTLRAAGPALLFENPVGHSIPVL 60 Query: 61 ANLFGTPRRVALGMGAEDVGELRRIGHLLAKLKEPEPPKGFKDVMGLGTLVKSLWDMAPK 120 NLFGTPRRVALGMGA+DV ELRRIGH+LA LKEPEPPKGFKD++GLGTLVKSLWDMAPK Sbjct: 61 GNLFGTPRRVALGMGADDVSELRRIGHVLAMLKEPEPPKGFKDILGLGTLVKSLWDMAPK 120 Query: 121 ERSSAPCQDIVWEGNDVDLDRLPIQHCWPGDVAPLITWGLVITKGPNKKRQNLGIYRQQV 180 E SAPCQDIVWEGNDVDL RLPIQHCWPGDVAPLITWGLVITKGP+KKRQNLGIYRQQV Sbjct: 121 EHRSAPCQDIVWEGNDVDLARLPIQHCWPGDVAPLITWGLVITKGPHKKRQNLGIYRQQV 180 Query: 181 LGRNKVIMRWLAHRGGALDFREHCIANPGKPYPIAVALGADPATILGAVTPVPDSLSEYQ 240 LGRNKVIMRWLAHRGGALDFREH IA GKPYP+AVALGADPATILGAVTPVPDSLSEYQ Sbjct: 181 LGRNKVIMRWLAHRGGALDFREHAIATGGKPYPVAVALGADPATILGAVTPVPDSLSEYQ 240 Query: 241 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHIYPDSAENPHPSGYEHALEGPYGDHTG 300 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHI PD + HPSGYE ALEGPYGDHTG Sbjct: 241 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHINPDPS---HPSGYEMALEGPYGDHTG 297 Query: 301 YYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEITD 360 YYNEQDWFPVFTIDRITMR+ PIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEI D Sbjct: 298 YYNEQDWFPVFTIDRITMRKSPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEIID 357 Query: 361 FYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEV 420 FYLPPEGCSYRMAVVQMKK+YAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDV+IRDW EV Sbjct: 358 FYLPPEGCSYRMAVVQMKKAYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWNEV 417 Query: 421 IWAITTRVDPVRDTVMVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETNREWGTTIAM 480 IWAITTRVDP+RDT +VDNTPIDYLDFASPVSGLGSKMGIDATNKWPGET+REWG TI+M Sbjct: 418 IWAITTRVDPIRDTTIVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETSREWGRTISM 477 Query: 481 TDAVKKRVDGIWDELGI 497 +D VK RVD IW ELG+ Sbjct: 478 SDEVKTRVDQIWQELGL 494 >ref|YP_001354025.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Janthinobacterium sp. Marseille] sp|A6T0H8.1|UBID_JANMA RecName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase; AltName: Full=Polyprenyl p-hydroxybenzoate decarboxylase gb|ABR89082.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Janthinobacterium sp. Marseille] Length = 494 Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/497 (88%), Positives = 464/497 (93%), Gaps = 3/497 (0%) Query: 1 MKYSDLRDFISQLQLSGELKRISTPVSPYLEITEICDRTLRASGPALIFDKVEGKNIPVL 60 MKYSDLRDFISQLQ GELKRI+ PVSPYLE+TEICDRTLRA+GPAL+F++ G+ IPVL Sbjct: 1 MKYSDLRDFISQLQQMGELKRINVPVSPYLEMTEICDRTLRAAGPALLFEQPTGQKIPVL 60 Query: 61 ANLFGTPRRVALGMGAEDVGELRRIGHLLAKLKEPEPPKGFKDVMGLGTLVKSLWDMAPK 120 NLFGTP RVALGMGA DV ELR+IGH+LA LKEPEPPKGFKD+MGLG+LVKS+WDMAPK Sbjct: 61 GNLFGTPHRVALGMGATDVSELRKIGHVLAMLKEPEPPKGFKDIMGLGSLVKSIWDMAPK 120 Query: 121 ERSSAPCQDIVWEGNDVDLDRLPIQHCWPGDVAPLITWGLVITKGPNKKRQNLGIYRQQV 180 E APC DIVWEGNDVDL RLPIQHCWPGD+APLITWGLVITKGP+KKRQNLGIYRQQV Sbjct: 121 ELRGAPCHDIVWEGNDVDLARLPIQHCWPGDIAPLITWGLVITKGPHKKRQNLGIYRQQV 180 Query: 181 LGRNKVIMRWLAHRGGALDFREHCIANPGKPYPIAVALGADPATILGAVTPVPDSLSEYQ 240 +GRNKVIMRWLA RGGALDFREH I N G+PYPIAVALGADPATILGAVTPVPDSLSEYQ Sbjct: 181 IGRNKVIMRWLAQRGGALDFREHSIVNRGQPYPIAVALGADPATILGAVTPVPDSLSEYQ 240 Query: 241 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHIYPDSAENPHPSGYEHALEGPYGDHTG 300 FAGLLRGSRTELVKA+GSELRVPASAEIVLEGHIYPD + HPSGYEHALEGPYGDHTG Sbjct: 241 FAGLLRGSRTELVKALGSELRVPASAEIVLEGHIYPDES---HPSGYEHALEGPYGDHTG 297 Query: 301 YYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEITD 360 YYNEQD FPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEI D Sbjct: 298 YYNEQDSFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEILD 357 Query: 361 FYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEV 420 FYLPPEGCSYRMAVVQMKK+Y GHAKRVMFGVWSFLRQFMYTKFIVVVDEDV+IRDWKEV Sbjct: 358 FYLPPEGCSYRMAVVQMKKAYPGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEV 417 Query: 421 IWAITTRVDPVRDTVMVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETNREWGTTIAM 480 IWAITTRVDP+RDT +VDNTPIDYLDFASPVSGLGSKMGIDATNKWPGET+REWG TI M Sbjct: 418 IWAITTRVDPIRDTTLVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETDREWGRTITM 477 Query: 481 TDAVKKRVDGIWDELGI 497 TD VKKRVD IW ELGI Sbjct: 478 TDEVKKRVDQIWQELGI 494 >sp|A4G3Y4.2|UBID_HERAR RecName: Full=3-octaprenyl-4-hydroxybenzoate carboxy-lyase; AltName: Full=Polyprenyl p-hydroxybenzoate decarboxylase emb|CAL61221.2| 3-octaprenyl-4-hydroxybenzoate decarboxylase (Polyprenyl p-hydroxybenzoate decarboxylase) [Herminiimonas arsenicoxydans] Length = 494 Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/497 (88%), Positives = 462/497 (92%), Gaps = 3/497 (0%) Query: 1 MKYSDLRDFISQLQLSGELKRISTPVSPYLEITEICDRTLRASGPALIFDKVEGKNIPVL 60 MKYSDLRDFISQLQ GELKRI+ PVSPYLE+TEICDRTLRA GPAL+F+ G IPVL Sbjct: 1 MKYSDLRDFISQLQQMGELKRINMPVSPYLEMTEICDRTLRAEGPALLFENPTGHTIPVL 60 Query: 61 ANLFGTPRRVALGMGAEDVGELRRIGHLLAKLKEPEPPKGFKDVMGLGTLVKSLWDMAPK 120 NLFGTP+RVALGMGA DV ELR+IGH+LA LKEPEPPKGFKD++GLG+LVKSLWDM PK Sbjct: 61 GNLFGTPQRVALGMGATDVSELRKIGHVLAMLKEPEPPKGFKDMLGLGSLVKSLWDMTPK 120 Query: 121 ERSSAPCQDIVWEGNDVDLDRLPIQHCWPGDVAPLITWGLVITKGPNKKRQNLGIYRQQV 180 ER APC DIVWEGNDVDL RLPIQHCWPGD+APLITWGLVITKGP+KKRQNLGIYRQQV Sbjct: 121 ERRDAPCHDIVWEGNDVDLARLPIQHCWPGDIAPLITWGLVITKGPHKKRQNLGIYRQQV 180 Query: 181 LGRNKVIMRWLAHRGGALDFREHCIANPGKPYPIAVALGADPATILGAVTPVPDSLSEYQ 240 +GRNKVIMRWLA RGGALDFREH IAN G+PYPIAVALGADPATILGAVTPVPDSLSEYQ Sbjct: 181 IGRNKVIMRWLAQRGGALDFREHSIANRGQPYPIAVALGADPATILGAVTPVPDSLSEYQ 240 Query: 241 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHIYPDSAENPHPSGYEHALEGPYGDHTG 300 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHIYPD + HPSGYEHALEGPYGDHTG Sbjct: 241 FAGLLRGSRTELVKAIGSELRVPASAEIVLEGHIYPDES---HPSGYEHALEGPYGDHTG 297 Query: 301 YYNEQDWFPVFTIDRITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEITD 360 YYNEQD FPVFTIDRITMRRDPIYHSTYTGKPPDEPA+LGVALNEVFIPLLQKQFSEI D Sbjct: 298 YYNEQDTFPVFTIDRITMRRDPIYHSTYTGKPPDEPAILGVALNEVFIPLLQKQFSEILD 357 Query: 361 FYLPPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEV 420 FYLPPEGCSYRMAVVQMKK+Y GHAKRVMFGVWSFLRQFMYTKFI+VVDEDV+IRDWKEV Sbjct: 358 FYLPPEGCSYRMAVVQMKKAYPGHAKRVMFGVWSFLRQFMYTKFIIVVDEDVNIRDWKEV 417 Query: 421 IWAITTRVDPVRDTVMVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETNREWGTTIAM 480 IWAITTRVDP RDT +VDNTPIDYLDFASPVSGLGSKMGIDATNKWPGET+REWGTTI M Sbjct: 418 IWAITTRVDPTRDTTLVDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETDREWGTTITM 477 Query: 481 TDAVKKRVDGIWDELGI 497 T VKKRVD IW ELGI Sbjct: 478 TPEVKKRVDQIWQELGI 494 >ref|YP_001099348.1| 3-octaprenyl-4-hydroxybenzoate decarboxylase [Herminiimonas arsenicoxydans] Length = 479 Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/481 (88%), Positives = 448/481 (93%), Gaps = 3/481 (0%) Query: 17 GELKRISTPVSPYLEITEICDRTLRASGPALIFDKVEGKNIPVLANLFGTPRRVALGMGA 76 GELKRI+ PVSPYLE+TEICDRTLRA GPAL+F+ G IPVL NLFGTP+RVALGMGA Sbjct: 2 GELKRINMPVSPYLEMTEICDRTLRAEGPALLFENPTGHTIPVLGNLFGTPQRVALGMGA 61 Query: 77 EDVGELRRIGHLLAKLKEPEPPKGFKDVMGLGTLVKSLWDMAPKERSSAPCQDIVWEGND 136 DV ELR+IGH+LA LKEPEPPKGFKD++GLG+LVKSLWDM PKER APC DIVWEGND Sbjct: 62 TDVSELRKIGHVLAMLKEPEPPKGFKDMLGLGSLVKSLWDMTPKERRDAPCHDIVWEGND 121 Query: 137 VDLDRLPIQHCWPGDVAPLITWGLVITKGPNKKRQNLGIYRQQVLGRNKVIMRWLAHRGG 196 VDL RLPIQHCWPGD+APLITWGLVITKGP+KKRQNLGIYRQQV+GRNKVIMRWLA RGG Sbjct: 122 VDLARLPIQHCWPGDIAPLITWGLVITKGPHKKRQNLGIYRQQVIGRNKVIMRWLAQRGG 181 Query: 197 ALDFREHCIANPGKPYPIAVALGADPATILGAVTPVPDSLSEYQFAGLLRGSRTELVKAI 256 ALDFREH IAN G+PYPIAVALGADPATILGAVTPVPDSLSEYQFAGLLRGSRTELVKAI Sbjct: 182 ALDFREHSIANRGQPYPIAVALGADPATILGAVTPVPDSLSEYQFAGLLRGSRTELVKAI 241 Query: 257 GSELRVPASAEIVLEGHIYPDSAENPHPSGYEHALEGPYGDHTGYYNEQDWFPVFTIDRI 316 GSELRVPASAEIVLEGHIYPD + HPSGYEHALEGPYGDHTGYYNEQD FPVFTIDRI Sbjct: 242 GSELRVPASAEIVLEGHIYPDES---HPSGYEHALEGPYGDHTGYYNEQDTFPVFTIDRI 298 Query: 317 TMRRDPIYHSTYTGKPPDEPAVLGVALNEVFIPLLQKQFSEITDFYLPPEGCSYRMAVVQ 376 TMRRDPIYHSTYTGKPPDEPA+LGVALNEVFIPLLQKQFSEI DFYLPPEGCSYRMAVVQ Sbjct: 299 TMRRDPIYHSTYTGKPPDEPAILGVALNEVFIPLLQKQFSEILDFYLPPEGCSYRMAVVQ 358 Query: 377 MKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVDIRDWKEVIWAITTRVDPVRDTVM 436 MKK+Y GHAKRVMFGVWSFLRQFMYTKFI+VVDEDV+IRDWKEVIWAITTRVDP RDT + Sbjct: 359 MKKAYPGHAKRVMFGVWSFLRQFMYTKFIIVVDEDVNIRDWKEVIWAITTRVDPTRDTTL 418 Query: 437 VDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETNREWGTTIAMTDAVKKRVDGIWDELG 496 VDNTPIDYLDFASPVSGLGSKMGIDATNKWPGET+REWGTTI MT VKKRVD IW ELG Sbjct: 419 VDNTPIDYLDFASPVSGLGSKMGIDATNKWPGETDREWGTTITMTPEVKKRVDQIWQELG 478 Query: 497 I 497 I Sbjct: 479 I 479