BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0007.p         (85 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775890.1| cation/multidrug efflux pump protein [Herbas...   150   9e-35
ref|YP_004156916.1| acriflavin resistance protein [Variovorax pa...   147   5e-34
gb|EGP44709.1| acriflavin resistance protein [Achromobacter xylo...   137   7e-31
ref|YP_995153.1| acriflavin resistance protein [Verminephrobacte...   135   2e-30
ref|YP_004751900.1| hypothetical protein CFU_1245 [Collimonas fu...   134   4e-30

>ref|YP_003775890.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae
            SmR1]
 gb|ADJ63982.1| cation/multidrug efflux pump protein [Herbaspirillum seropedicae
            SmR1]
          Length = 1051

 Score =  150 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 71/74 (95%), Positives = 72/74 (97%)

Query: 1    MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY 60
            MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGL+LSQALTLFTTPVVYLYLDRAHYWY
Sbjct: 972  MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLILSQALTLFTTPVVYLYLDRAHYWY 1031

Query: 61   MNKKEARAARKAAR 74
            M KKEAR ARKAAR
Sbjct: 1032 MRKKEARQARKAAR 1045


>ref|YP_004156916.1| acriflavin resistance protein [Variovorax paradoxus EPS]
 gb|ADU38805.1| acriflavin resistance protein [Variovorax paradoxus EPS]
          Length = 1058

 Score =  147 bits (371), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 2/87 (2%)

Query: 1    MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY 60
            MTTMCALLSGLPLMLGHG+GSELRRPLGYAMVGGL+LSQALTLFTTPVVYLYLDRAH+WY
Sbjct: 972  MTTMCALLSGLPLMLGHGSGSELRRPLGYAMVGGLILSQALTLFTTPVVYLYLDRAHFWY 1031

Query: 61   MNKKEARAARKAARKGGA--APVIESH 85
            + +KEAR ARKAA+  G    PV E+H
Sbjct: 1032 LRRKEARKARKAAKGEGGETPPVAEAH 1058


>gb|EGP44709.1| acriflavin resistance protein [Achromobacter xylosoxidans AXX-A]
          Length = 1054

 Score =  137 bits (344), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 67/84 (79%), Positives = 72/84 (85%), Gaps = 2/84 (2%)

Query: 1    MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY 60
            MTTMCALLSGLPLML HG GSELRRPLGYAMVGGL++SQALTLFTTPVVYLYLDRAH+WY
Sbjct: 972  MTTMCALLSGLPLMLSHGQGSELRRPLGYAMVGGLIVSQALTLFTTPVVYLYLDRAHFWY 1031

Query: 61   MNKKEARAARKAARKGGAAPVIES 84
            M KK+ RAARKA       P +ES
Sbjct: 1032 MRKKQERAARKAG--APVQPGVES 1053


>ref|YP_995153.1| acriflavin resistance protein [Verminephrobacter eiseniae EF01-2]
 gb|ABM56135.1| acriflavin resistance protein [Verminephrobacter eiseniae EF01-2]
          Length = 1051

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/84 (79%), Positives = 72/84 (85%), Gaps = 7/84 (8%)

Query: 1    MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY 60
            MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPV+YLYLDRAHYWY
Sbjct: 972  MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVIYLYLDRAHYWY 1031

Query: 61   MNKKEARAARKAARKGGAAPVIES 84
            M +K+++ A       G  P IES
Sbjct: 1032 MGRKKSKHA-------GMIPAIES 1048


>ref|YP_004751900.1| hypothetical protein CFU_1245 [Collimonas fungivorans Ter331]
 gb|AEK61077.1| hypothetical protein CFU_1245 [Collimonas fungivorans Ter331]
          Length = 1049

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/65 (96%), Positives = 64/65 (98%)

Query: 1    MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY 60
            MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY
Sbjct: 972  MTTMCALLSGLPLMLGHGAGSELRRPLGYAMVGGLVLSQALTLFTTPVVYLYLDRAHYWY 1031

Query: 61   MNKKE 65
            M +KE
Sbjct: 1032 MRRKE 1036