BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0320.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775196.1| transmembrane NADH dehydrogenase I subunit J... 355 2e-96 ref|YP_004752255.1| NADH-ubiquinone oxidoreductase subunit J [Co... 336 2e-90 ref|ZP_08275181.1| NADH-ubiquinone oxidoreductase chain J [Oxalo... 313 1e-83 ref|YP_001353161.1| NADH dehydrogenase I chain J [Janthinobacter... 306 1e-81 ref|YP_001100097.1| NADH dehydrogenase I subunit J [Herminiimona... 285 2e-75 >ref|YP_003775196.1| transmembrane NADH dehydrogenase I subunit J [Herbaspirillum seropedicae SmR1] gb|ADJ63288.1| transmembrane NADH dehydrogenase I (Chain J) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 219 Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/201 (87%), Positives = 192/201 (95%) Query: 1 MEFKTVLFYAFSVVLVLAALRVITARNPVHAALFLVLAFFSAAGIWMLLKAEFLAIVLVL 60 MEFKTVLFY F+V+LV+AA+RVITARNPVHAALFLVL+FFSAAGIWMLLKAEFLAIVLVL Sbjct: 1 MEFKTVLFYVFAVILVIAAVRVITARNPVHAALFLVLSFFSAAGIWMLLKAEFLAIVLVL 60 Query: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAATIGVIIVLEMAAVLLRSFWAPEAQ 120 VYVGAVMVLFLFVVMMLDIN+DK+REGFWGYFPLAATIGVIIVLEMAAVLLRSFW PE Q Sbjct: 61 VYVGAVMVLFLFVVMMLDINMDKLREGFWGYFPLAATIGVIIVLEMAAVLLRSFWTPETQ 120 Query: 121 VPAASNTIGTTKALGMLIYTEYVYAFEVAAVILLVAIVAAVALTLRRRKDSKYFSPAEAV 180 VPAAS+T+G TK LG LI+TEYVYAFE+AAVILLVAIVAAVALTLR+RKDSKYF PA+AV Sbjct: 121 VPAASDTLGQTKPLGKLIFTEYVYAFEIAAVILLVAIVAAVALTLRKRKDSKYFDPAKAV 180 Query: 181 KVKSTDRVRLVKMKSESTRNN 201 KVK++DRVRLV MK+ESTRN Sbjct: 181 KVKASDRVRLVSMKAESTRNE 201 >ref|YP_004752255.1| NADH-ubiquinone oxidoreductase subunit J [Collimonas fungivorans Ter331] gb|AEK61432.1| NADH-ubiquinone oxidoreductase chain J [Collimonas fungivorans Ter331] Length = 223 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 170/197 (86%), Positives = 181/197 (91%) Query: 1 MEFKTVLFYAFSVVLVLAALRVITARNPVHAALFLVLAFFSAAGIWMLLKAEFLAIVLVL 60 MEFKT LFYAFSVVLV+AALRVITARNPVHAALFLVL+FFSAAGIWMLLKAEFL+IVLVL Sbjct: 1 MEFKTFLFYAFSVVLVIAALRVITARNPVHAALFLVLSFFSAAGIWMLLKAEFLSIVLVL 60 Query: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAATIGVIIVLEMAAVLLRSFWAPEAQ 120 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAAT+G +IVLEMAAV+ F EA Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAATVGTVIVLEMAAVIFHGFQGSEAD 120 Query: 121 VPAASNTIGTTKALGMLIYTEYVYAFEVAAVILLVAIVAAVALTLRRRKDSKYFSPAEAV 180 VPA S IG TK LG LIYTEYVYAFE+AAVILLVAIVAAVALTLRRRKD+KYFSP+ AV Sbjct: 121 VPAISANIGNTKELGKLIYTEYVYAFEIAAVILLVAIVAAVALTLRRRKDTKYFSPSAAV 180 Query: 181 KVKSTDRVRLVKMKSES 197 KVKSTDRVR+VKMKSE+ Sbjct: 181 KVKSTDRVRIVKMKSEA 197 >ref|ZP_08275181.1| NADH-ubiquinone oxidoreductase chain J [Oxalobacteraceae bacterium IMCC9480] gb|EGF31352.1| NADH-ubiquinone oxidoreductase chain J [Oxalobacteraceae bacterium IMCC9480] Length = 221 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 167/205 (81%), Positives = 191/205 (93%), Gaps = 2/205 (0%) Query: 1 MEFKTVLFYAFSVVLVLAALRVITARNPVHAALFLVLAFFSAAGIWMLLKAEFLAIVLVL 60 MEFKT LFYAFS +LV+AAL+VIT RNPVH+ALFLVL+FFSAA IW+LL+AEFLAIVLVL Sbjct: 1 MEFKTALFYAFSAILVMAALKVITDRNPVHSALFLVLSFFSAAAIWLLLQAEFLAIVLVL 60 Query: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAATIGVIIVLEMAAVLLRSFWAPEAQ 120 VYVGAVMVLFLFVVMMLDIN+DKMREGFWGY P AA IGV+IVLEM+AVLL++FWAP+AQ Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDKMREGFWGYLPFAAFIGVLIVLEMSAVLLQAFWAPDAQ 120 Query: 121 VPAASNTIGTTKALGMLIYTEYVYAFEVAAVILLVAIVAAVALTLRRRKDSKYFSPAEAV 180 VP+A++TIGTTK LG LIYTEYV+AFE+AA ILL+AIVAAVALTLR+RKDSKYF PAEAV Sbjct: 121 VPSAASTIGTTKELGKLIYTEYVFAFEIAAAILLLAIVAAVALTLRKRKDSKYFDPAEAV 180 Query: 181 KVKSTDRVRLVKMKSESTR--NNGN 203 KVK++DRVR+VKMKSESTR +GN Sbjct: 181 KVKASDRVRIVKMKSESTRIVADGN 205 >ref|YP_001353161.1| NADH dehydrogenase I chain J [Janthinobacterium sp. Marseille] gb|ABR88441.1| NADH dehydrogenase I chain J [Janthinobacterium sp. Marseille] Length = 213 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 151/216 (69%), Positives = 179/216 (82%), Gaps = 3/216 (1%) Query: 1 MEFKTVLFYAFSVVLVLAALRVITARNPVHAALFLVLAFFSAAGIWMLLKAEFLAIVLVL 60 MEF TVLFY FS +LVLAA+RVIT NPVHAALFLVL+F SAA +WMLLKAEFL+IVL+L Sbjct: 1 MEFTTVLFYVFSAILVLAAIRVITESNPVHAALFLVLSFCSAAALWMLLKAEFLSIVLIL 60 Query: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAATIGVIIVLEMAAVLLRSFWAPEAQ 120 VYVGAVMVLFLFVVMM+DI L K+REGFWGY PLAATIGV+IVLEMA VL R FW Q Sbjct: 61 VYVGAVMVLFLFVVMMVDIKLTKLREGFWGYLPLAATIGVVIVLEMALVLFRGFWRSHTQ 120 Query: 121 VPAASNTIGTTKALGMLIYTEYVYAFEVAAVILLVAIVAAVALTLRRRKDSKYFSPAEAV 180 VP S IG K LG LIYT+Y+YAFE+AAV+LLV ++AAVALT+R+RKDSKYF+P +AV Sbjct: 121 VPEVSANIGNAKELGKLIYTDYLYAFEIAAVLLLVGMIAAVALTMRKRKDSKYFAPGDAV 180 Query: 181 KVKSTDRVRLVKMKSESTRNNGNTGDDAQASGAEKQ 216 +VK++DR+R+VKMK++S R N GD A AE++ Sbjct: 181 RVKASDRLRVVKMKADSARAN---GDSPAAPAAEQK 213 >ref|YP_001100097.1| NADH dehydrogenase I subunit J [Herminiimonas arsenicoxydans] emb|CAL61972.1| NADH-quinone oxidoreductase subunit J (NADH dehydrogenase I subunit J) (NDH-1 subunit J) [Herminiimonas arsenicoxydans] Length = 213 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 153/216 (70%), Positives = 181/216 (83%), Gaps = 3/216 (1%) Query: 1 MEFKTVLFYAFSVVLVLAALRVITARNPVHAALFLVLAFFSAAGIWMLLKAEFLAIVLVL 60 MEF TVLFY FS +LV AA+RVIT NPVHAALFLVL+F +AA +WMLLKAEFL+IVLVL Sbjct: 1 MEFTTVLFYVFSAILVFAAIRVITDSNPVHAALFLVLSFCTAAALWMLLKAEFLSIVLVL 60 Query: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWGYFPLAATIGVIIVLEMAAVLLRSFWAPEAQ 120 VYVGAVMVLFLFVVMM+DI L +REGFWGY PLAATIGV+IVLEMAAVL R FW Sbjct: 61 VYVGAVMVLFLFVVMMVDIKLSNVREGFWGYLPLAATIGVVIVLEMAAVLFRGFWKAHTH 120 Query: 121 VPAASNTIGTTKALGMLIYTEYVYAFEVAAVILLVAIVAAVALTLRRRKDSKYFSPAEAV 180 VP A+ IG TK LG LIYT+Y+YAFE+AA++LL+A+VAAVALT+R+RKD+KYF+P +AV Sbjct: 121 VPEAAAMIGNTKELGKLIYTQYLYAFELAALLLLLAMVAAVALTMRKRKDTKYFAPGDAV 180 Query: 181 KVKSTDRVRLVKMKSESTRNNGNTGDDAQASGAEKQ 216 KVKS DR+R+VKMK+ESTR N GD + A AE++ Sbjct: 181 KVKSGDRLRVVKMKAESTRAN---GDQSAAPAAEQK 213