BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0318.p (359 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775194.1| transmembrane NADH dehydrogenase I subunit H... 599 e-169 ref|YP_004752253.1| NADH-ubiquinone oxidoreductase subunit H [Co... 585 e-165 ref|YP_001100099.1| NADH dehydrogenase I subunit H [Herminiimona... 566 e-159 ref|ZP_08275179.1| NADH-ubiquinone oxidoreductase chain H [Oxalo... 560 e-157 ref|YP_001353159.1| NADH dehydrogenase I chain H [Janthinobacter... 554 e-156 >ref|YP_003775194.1| transmembrane NADH dehydrogenase I subunit H [Herbaspirillum seropedicae SmR1] gb|ADJ63286.1| transmembrane NADH dehydrogenase I (chain H) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 356 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 291/359 (81%), Positives = 328/359 (91%), Gaps = 3/359 (0%) Query: 1 MDQLIANINAVGPTYLGTAWPYVWTFVWSLLKILVVMVPLLGCVAYLTLWERKLIGWMHV 60 MD LIA IN VGP YLG P ++T VW+L+KILVVMVPLL CVAY+T WERKLIGWMHV Sbjct: 1 MDHLIAQINTVGPAYLG---PTLFTLVWTLVKILVVMVPLLVCVAYMTYWERKLIGWMHV 57 Query: 61 RLGPNRVGPLGLLQPIADALKLIFKEVTTPARASKVLFFIAPIMTIMPALAAWAVIPFGP 120 RLGPNRVGP GLLQPIADA+KLIFKE++TP++A+K LF++AP+MTIMPALAAWAV+PF P Sbjct: 58 RLGPNRVGPAGLLQPIADAVKLIFKEISTPSKANKALFYLAPVMTIMPALAAWAVVPFSP 117 Query: 121 EAVIANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV 180 E V+ANVNAGLL++MAITSMEVYG+IIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV Sbjct: 118 EHVLANVNAGLLYLMAITSMEVYGIIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV 177 Query: 181 IVLMVSGSLNLIDIVTSQGKGYFADHGVGFLSWNWLSLLPIFVIYIVSGIAETNRHPFDV 240 +VLMVSGSLN+ DIV Q +G+FA G+ FLSWNWL LLPIFVIY VSG+AETNRHPFDV Sbjct: 178 VVLMVSGSLNMTDIVMGQTQGHFASMGLNFLSWNWLPLLPIFVIYFVSGVAETNRHPFDV 237 Query: 241 VEGESEIVAGHMIEYSGMSFAMFFLAEYANMWLISILTALLFLGGWASPLSVLDFIPGWI 300 VEGESEIVAGHMIEYSGMSFAMFFLAEYA M LISILTALLF GGW++P+S LDFIPGWI Sbjct: 238 VEGESEIVAGHMIEYSGMSFAMFFLAEYAAMILISILTALLFFGGWSAPVSALDFIPGWI 297 Query: 301 WLGIKTFFVVSLFIWVRASFPRYRYDQIMRLGWKVFIPLTLVYLVIVATWMQTSWNIWK 359 WLG+KTFF +SL++W+RASFPRYRYDQIMRLGWKVFIPLTLV+LV+VA W+Q+ WNIWK Sbjct: 298 WLGLKTFFFLSLYVWIRASFPRYRYDQIMRLGWKVFIPLTLVWLVVVAIWIQSPWNIWK 356 >ref|YP_004752253.1| NADH-ubiquinone oxidoreductase subunit H [Collimonas fungivorans Ter331] gb|AEK61430.1| NADH-ubiquinone oxidoreductase chain H [Collimonas fungivorans Ter331] Length = 356 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 297/359 (82%), Positives = 325/359 (90%), Gaps = 4/359 (1%) Query: 1 MDQLIANINAVGPTYLGTAWPYVWTFVWSLLKILVVMVPLLGCVAYLTLWERKLIGWMHV 60 MD IA INA G + G ++W +W+L+KI+VV+VPLL CVAY+T WERKLIGWMH+ Sbjct: 2 MDHFIAAINATGADWFG----FIWPLIWNLIKIIVVVVPLLLCVAYMTYWERKLIGWMHI 57 Query: 61 RLGPNRVGPLGLLQPIADALKLIFKEVTTPARASKVLFFIAPIMTIMPALAAWAVIPFGP 120 RLGPNRVGP GLLQPIADALKL+ KEVT PARA+KVLFFIAPIMTIMPALAAWAV+PFGP Sbjct: 58 RLGPNRVGPAGLLQPIADALKLLLKEVTLPARANKVLFFIAPIMTIMPALAAWAVVPFGP 117 Query: 121 EAVIANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV 180 E V+ANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGF LV Sbjct: 118 ETVLANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGFALV 177 Query: 181 IVLMVSGSLNLIDIVTSQGKGYFADHGVGFLSWNWLSLLPIFVIYIVSGIAETNRHPFDV 240 IVLMVSGSLNL DIV +Q KGYF DHG FLSWNWLSLLP+F+IY +SGIAETNRHPFDV Sbjct: 178 IVLMVSGSLNLTDIVMAQSKGYFYDHGAAFLSWNWLSLLPVFLIYFISGIAETNRHPFDV 237 Query: 241 VEGESEIVAGHMIEYSGMSFAMFFLAEYANMWLISILTALLFLGGWASPLSVLDFIPGWI 300 VEGESEIVAGHMIEYSGMSFAMFFLAEYANM L+SILT LLF+GGWASPL++LD+IPGWI Sbjct: 238 VEGESEIVAGHMIEYSGMSFAMFFLAEYANMILVSILTTLLFMGGWASPLAMLDWIPGWI 297 Query: 301 WLGIKTFFVVSLFIWVRASFPRYRYDQIMRLGWKVFIPLTLVYLVIVATWMQTSWNIWK 359 WLG KTFF++S+FIWVRASFPRYRYDQIMRLGWKVFIPL L YLVIVA W+Q+ WNIWK Sbjct: 298 WLGAKTFFMLSVFIWVRASFPRYRYDQIMRLGWKVFIPLILAYLVIVAAWIQSPWNIWK 356 >ref|YP_001100099.1| NADH dehydrogenase I subunit H [Herminiimonas arsenicoxydans] sp|A4G637.1|NUOH_HERAR RecName: Full=NADH-quinone oxidoreductase subunit H; AltName: Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit H emb|CAL61974.1| NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I subunit H) (NDH-1 subunit H) [Herminiimonas arsenicoxydans] Length = 357 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 280/361 (77%), Positives = 316/361 (87%), Gaps = 6/361 (1%) Query: 1 MDQLIANINAVGPTYLGTAWPYVWTFVWSLLKILVVMVPLLGCVAYLTLWERKLIGWMHV 60 MDQL+A+++A G ++LG W VW+L+KI+ V++PL+GCVAYLTLWERK+IGWMHV Sbjct: 1 MDQLLASVHAAGHSFLGD----YWLLVWTLVKIVAVVLPLMGCVAYLTLWERKVIGWMHV 56 Query: 61 RLGPNRVGPLGLLQPIADALKLIFKEVTTPARASKVLFFIAPIMTIMPALAAWAVIPFGP 120 R GPNR GP GLLQPIADALKL+ KE+ PA++SK LF IAPIMTIMPALAAWAVIPFGP Sbjct: 57 RHGPNRTGPAGLLQPIADALKLLLKEIVVPAKSSKALFVIAPIMTIMPALAAWAVIPFGP 116 Query: 121 EAVIANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV 180 EA +ANVNAGLLFVMAITS+EVYGVI+AGWASNSKYAFLGAMRASAQM+SYEI+MGF LV Sbjct: 117 EAALANVNAGLLFVMAITSLEVYGVIVAGWASNSKYAFLGAMRASAQMISYEIAMGFVLV 176 Query: 181 IVLMVSGSLNLIDIVTSQGKGYFADHGVGFLSWNWLSLLPIFVIYIVSGIAETNRHPFDV 240 IVLMVSGSLNL +IV Q G FAD G+ FLSWNWL LLP+FVIYI+SG AE NRHPFDV Sbjct: 177 IVLMVSGSLNLSEIVMLQTSGRFADMGLTFLSWNWLPLLPMFVIYIISGTAELNRHPFDV 236 Query: 241 VEGESEIVAGHMIEYSGMSFAMFFLAEYANMWLISILTALLFLGGWASPLSVLDF--IPG 298 VEGESEIVAGHM+EYSGMSFAMFFLAEYANM LIS++ L+FLGGW+SP+ + F IPG Sbjct: 237 VEGESEIVAGHMVEYSGMSFAMFFLAEYANMILISMMATLMFLGGWSSPIDAMPFTWIPG 296 Query: 299 WIWLGIKTFFVVSLFIWVRASFPRYRYDQIMRLGWKVFIPLTLVYLVIVATWMQTSWNIW 358 WIWLGIKT FVV+LFIW RASFPRYRYDQIMRLGWKVFIPLTLVYL+IVA WM+T WNIW Sbjct: 297 WIWLGIKTLFVVTLFIWFRASFPRYRYDQIMRLGWKVFIPLTLVYLLIVAIWMKTPWNIW 356 Query: 359 K 359 Sbjct: 357 H 357 >ref|ZP_08275179.1| NADH-ubiquinone oxidoreductase chain H [Oxalobacteraceae bacterium IMCC9480] gb|EGF31350.1| NADH-ubiquinone oxidoreductase chain H [Oxalobacteraceae bacterium IMCC9480] Length = 362 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 275/366 (75%), Positives = 315/366 (86%), Gaps = 11/366 (3%) Query: 1 MDQLIANINAVGPTYLGTAWPYVWTFVWSLLKILVVMVPLLGCVAYLTLWERKLIGWMHV 60 MDQL+ NI A G ++ G Y W VW+L+KI+ +++P++ CVAYLTLWERK+IGWMHV Sbjct: 1 MDQLLVNIQATGSSWFG----YFWPLVWNLVKIIALVLPIMACVAYLTLWERKMIGWMHV 56 Query: 61 RLGPNRVGPLGLLQPIADALKLIFKEVTTPARASKVLFFIAPIMTIMPALAAWAVIPFGP 120 R+GPNRVGP GLLQPIADALKL+FKE+ PA+++K LF IAPIMTIMPALAAW VIPFGP Sbjct: 57 RIGPNRVGPAGLLQPIADALKLLFKEIIIPAKSNKALFVIAPIMTIMPALAAWVVIPFGP 116 Query: 121 EAVIANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV 180 E +AN+NAGLLF MAI S+EVYGVIIAGWASNSKYAFLGAMRASAQM+SYEISMGF LV Sbjct: 117 EVALANLNAGLLFAMAIMSLEVYGVIIAGWASNSKYAFLGAMRASAQMISYEISMGFVLV 176 Query: 181 IVLMVSGSLNLIDIVTSQGKGYFADHGVGFLSWNWLSLLPIFVIYIVSGIAETNRHPFDV 240 IVLMV+GSLN DIV +Q +G A G+ FLSWNWL LLP+F ++I++GIAET+RHPFDV Sbjct: 177 IVLMVTGSLNFTDIVLAQTEGRMASMGLNFLSWNWLPLLPMFGVFIIAGIAETSRHPFDV 236 Query: 241 VEGESEIVAGHMIEYSGMSFAMFFLAEYANMWLISILTALLFLGGWASP-------LSVL 293 VEGESEIVAGHM+EYSGMSFAMFFLAEYANM LISIL AL+FLGGW SP L +L Sbjct: 237 VEGESEIVAGHMVEYSGMSFAMFFLAEYANMILISILAALMFLGGWDSPIGAQVPVLGLL 296 Query: 294 DFIPGWIWLGIKTFFVVSLFIWVRASFPRYRYDQIMRLGWKVFIPLTLVYLVIVATWMQT 353 ++PGWIWLGIKTF +VS+FIWVRASFPRYRYDQIMRLGWK+FIPLTL YLVIVA WMQT Sbjct: 297 SYLPGWIWLGIKTFLIVSIFIWVRASFPRYRYDQIMRLGWKIFIPLTLGYLVIVAAWMQT 356 Query: 354 SWNIWK 359 SWNIWK Sbjct: 357 SWNIWK 362 >ref|YP_001353159.1| NADH dehydrogenase I chain H [Janthinobacterium sp. Marseille] sp|A6SY12.1|NUOH_JANMA RecName: Full=NADH-quinone oxidoreductase subunit H; AltName: Full=NADH dehydrogenase I subunit H; AltName: Full=NDH-1 subunit H gb|ABR88738.1| NADH dehydrogenase I chain H [Janthinobacterium sp. Marseille] Length = 357 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 271/361 (75%), Positives = 310/361 (85%), Gaps = 6/361 (1%) Query: 1 MDQLIANINAVGPTYLGTAWPYVWTFVWSLLKILVVMVPLLGCVAYLTLWERKLIGWMHV 60 MDQL A+I+A G + LG Y W VW+L+KI+ V+ PL+G VAYLTLWERK+IGWMHV Sbjct: 1 MDQLFASIHATGQSLLG----YYWPLVWNLVKIIAVVAPLMGAVAYLTLWERKVIGWMHV 56 Query: 61 RLGPNRVGPLGLLQPIADALKLIFKEVTTPARASKVLFFIAPIMTIMPALAAWAVIPFGP 120 R GPNR GP GLLQPIAD +KL+ KE+ PA++SK LF IAPIMTIMPALAAWAVIPFGP Sbjct: 57 RHGPNRTGPAGLLQPIADGVKLLLKEIVVPAKSSKALFVIAPIMTIMPALAAWAVIPFGP 116 Query: 121 EAVIANVNAGLLFVMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLV 180 E V+A+VNAGLLFVMAITS+EVYGVI+AGWASNSKYAFLGAMRASAQM+SYEI+MGF LV Sbjct: 117 ETVLADVNAGLLFVMAITSLEVYGVIVAGWASNSKYAFLGAMRASAQMISYEIAMGFVLV 176 Query: 181 IVLMVSGSLNLIDIVTSQGKGYFADHGVGFLSWNWLSLLPIFVIYIVSGIAETNRHPFDV 240 I+LMV+GS+NL IV +Q G FA+ G+ FLSWNWL LLP+F IYI+SG AE NRHPFDV Sbjct: 177 IILMVTGSMNLTTIVNTQNTGRFAEMGLTFLSWNWLPLLPMFFIYIISGTAELNRHPFDV 236 Query: 241 VEGESEIVAGHMIEYSGMSFAMFFLAEYANMWLISILTALLFLGGWASPLSVLDF--IPG 298 VEGESEIVAGHM+EYSGMSFAMFFLAEYANMWLISI+ L+FLGGW SP+ + F +PG Sbjct: 237 VEGESEIVAGHMVEYSGMSFAMFFLAEYANMWLISIMATLMFLGGWTSPIDMAPFTWVPG 296 Query: 299 WIWLGIKTFFVVSLFIWVRASFPRYRYDQIMRLGWKVFIPLTLVYLVIVATWMQTSWNIW 358 WIWLG+KT VV++FIW RASFPRYRYDQIMRLGWKVFIPLTLVYL+IVA WM+T WNIW Sbjct: 297 WIWLGLKTLMVVTMFIWFRASFPRYRYDQIMRLGWKVFIPLTLVYLLIVAIWMKTPWNIW 356 Query: 359 K 359 Sbjct: 357 N 357