BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0315.p (163 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775191.1| NADH dehydrogenase I subunit E [Herbaspirill... 311 2e-83 ref|YP_001100102.1| NADH dehydrogenase subunit E [Herminiimonas ... 275 1e-72 ref|YP_004752250.1| NADH-ubiquinone oxidoreductase subunit E [Co... 271 2e-71 ref|ZP_08276196.1| NADH-ubiquinone oxidoreductase chain E [Oxalo... 254 3e-66 ref|YP_001353156.1| NADH dehydrogenase subunit E [Janthinobacter... 252 2e-65 >ref|YP_003775191.1| NADH dehydrogenase I subunit E [Herbaspirillum seropedicae SmR1] gb|ADJ63283.1| NADH dehydrogenase I (Chain E) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 159 Score = 311 bits (798), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 146/159 (91%), Positives = 154/159 (96%) Query: 5 MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLSQ+ALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV Sbjct: 1 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 60 Query: 65 QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124 QEVATFYNMFNTS GKHKITVCTNLPCLLSGG+RAAHHLK LG+ Y+ETTADGQFT++ Sbjct: 61 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKQKLGIDYRETTADGQFTLM 120 Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163 EGECMGACGDAPVMLVNNH+MCSWMSN+KIDALLEELKK Sbjct: 121 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 159 >ref|YP_001100102.1| NADH dehydrogenase subunit E [Herminiimonas arsenicoxydans] emb|CAL61977.1| NADH-quinone oxidoreductase subunit E (NADH dehydrogenase I subunit E) (NDH-1 subunit E) [Herminiimonas arsenicoxydans] Length = 159 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 124/159 (77%), Positives = 146/159 (91%) Query: 5 MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLS+ A KKIDRE+AK+PADQ+QSAVM+AL IAQ E GWLP E+ QE+ADY+GMPA+AV Sbjct: 1 MLLSEQAYKKIDREIAKFPADQKQSAVMAALAIAQDETGWLPPEVMQEVADYLGMPAIAV 60 Query: 65 QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124 QEVATFYNM++T GKHKI+VCTNLPCLLSGG+RAAH+LKH LG+ Y+ETTADGQFT++ Sbjct: 61 QEVATFYNMYDTKPVGKHKISVCTNLPCLLSGGERAAHYLKHKLGIDYRETTADGQFTLI 120 Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163 EGECMGACGDAPVM+VNN RMCS+MS+DKIDAL+EELKK Sbjct: 121 EGECMGACGDAPVMIVNNKRMCSFMSDDKIDALVEELKK 159 >ref|YP_004752250.1| NADH-ubiquinone oxidoreductase subunit E [Collimonas fungivorans Ter331] gb|AEK61427.1| NADH-ubiquinone oxidoreductase chain E [Collimonas fungivorans Ter331] Length = 167 Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 123/163 (75%), Positives = 143/163 (87%) Query: 1 MANDMLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMP 60 MANDMLLSQD KKIDRE+AK+PADQ+QSAVM+AL IAQ E GWL E Q++ADY+GMP Sbjct: 1 MANDMLLSQDTYKKIDREVAKFPADQKQSAVMAALAIAQDEKGWLAPETMQDVADYLGMP 60 Query: 61 AVAVQEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQ 120 A+AVQEVATFYNM+NT GKHKI++CTNLPC LSGG+RAA HLKH LG+ ++ETTADG Sbjct: 61 AIAVQEVATFYNMYNTKPVGKHKISICTNLPCQLSGGERAAEHLKHKLGIDFRETTADGL 120 Query: 121 FTIVEGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163 FT+VEGECMGACGDAPV+LVNN RMCSWMSN+KID LL+EL + Sbjct: 121 FTLVEGECMGACGDAPVLLVNNKRMCSWMSNEKIDGLLQELSE 163 >ref|ZP_08276196.1| NADH-ubiquinone oxidoreductase chain E [Oxalobacteraceae bacterium IMCC9480] gb|EGF30335.1| NADH-ubiquinone oxidoreductase chain E [Oxalobacteraceae bacterium IMCC9480] Length = 159 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 119/159 (74%), Positives = 134/159 (84%) Query: 5 MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLS+ A KKIDRE++K+PADQ+QSAVM AL IAQ E GWL L QEIADY+GM +AV Sbjct: 1 MLLSELAYKKIDREVSKFPADQKQSAVMGALAIAQDEAGWLSPPLMQEIADYLGMAPIAV 60 Query: 65 QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124 QEVA FY M+NTS GK KITVCTNLPC LSGG++AA +LK LG+ Y+ETTADGQFT+ Sbjct: 61 QEVAAFYEMYNTSPTGKFKITVCTNLPCALSGGEKAARYLKQKLGIDYRETTADGQFTLR 120 Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163 EGECMGACGDAPVMLVNN RMCSWMSNDKID L+EELKK Sbjct: 121 EGECMGACGDAPVMLVNNKRMCSWMSNDKIDDLVEELKK 159 >ref|YP_001353156.1| NADH dehydrogenase subunit E [Janthinobacterium sp. Marseille] gb|ABR88614.1| NADH dehydrogenase I chain E [Janthinobacterium sp. Marseille] Length = 159 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 114/159 (71%), Positives = 138/159 (86%) Query: 5 MLLSQDALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLS+ K+IDRE+AK+P DQ+QSAVM+AL+IAQ E WLP E+ Q++ADY+GMPA+AV Sbjct: 1 MLLSEQTYKRIDREVAKFPPDQKQSAVMAALQIAQDETRWLPPEVMQDVADYLGMPAIAV 60 Query: 65 QEVATFYNMFNTSQQGKHKITVCTNLPCLLSGGDRAAHHLKHTLGVGYKETTADGQFTIV 124 QEVATFYNM+NT GK KI+VCTNLPC LSGG++AAH+LK LG+ Y+ETT D FT+V Sbjct: 61 QEVATFYNMYNTKPVGKFKISVCTNLPCQLSGGEKAAHYLKQKLGIDYRETTDDDLFTLV 120 Query: 125 EGECMGACGDAPVMLVNNHRMCSWMSNDKIDALLEELKK 163 EGECMGACGDAPVMLVNN RMCS+MS++KIDAL+EELKK Sbjct: 121 EGECMGACGDAPVMLVNNKRMCSFMSDEKIDALVEELKK 159