BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0313.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775189.1| NADH dehydrogenase I subunit C [Herbaspirill... 377 e-103 ref|YP_004752248.1| NADH-ubiquinone oxidoreductase subunit C [Co... 359 1e-97 ref|YP_001353154.1| NADH dehydrogenase I chain C [Janthinobacter... 347 5e-94 ref|YP_001100104.1| putative NADH-quinone oxidoreductase chain C... 347 6e-94 ref|ZP_08276194.1| NADH-ubiquinone oxidoreductase chain C [Oxalo... 342 2e-92 >ref|YP_003775189.1| NADH dehydrogenase I subunit C [Herbaspirillum seropedicae SmR1] gb|ADJ63281.1| NADH dehydrogenase I (Chain C) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 198 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 178/198 (89%), Positives = 191/198 (96%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVSLGEITVVVKSADYLSAMRVLRDHADTRFEELMDL 60 MTTKLETLEAALRNALGGYLQNLTV+LGE+TVVVK+ADYLSAMRVLRDHADTRFE+L+DL Sbjct: 1 MTTKLETLEAALRNALGGYLQNLTVALGEVTVVVKAADYLSAMRVLRDHADTRFEQLIDL 60 Query: 61 CGVDYSTYGDGVWDGPRFAVVSHLLSLTHNWRVRVRVFAPDDELPLVASVMNIWSAANWY 120 CGVDYSTYGDG W+GPRFAVVSHL+S+ HNWRVRVRVFAPDD+LP+VASV IW++A WY Sbjct: 61 CGVDYSTYGDGAWEGPRFAVVSHLMSIAHNWRVRVRVFAPDDDLPIVASVDPIWNSAGWY 120 Query: 121 ERETFDFYGILFDGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 ERE FDFYGILFDGH DLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI Sbjct: 121 EREAFDFYGILFDGHPDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 Query: 181 EPREITPRVIREENYGIK 198 EPREITPR+IREENYGIK Sbjct: 181 EPREITPRIIREENYGIK 198 >ref|YP_004752248.1| NADH-ubiquinone oxidoreductase subunit C [Collimonas fungivorans Ter331] gb|AEK61425.1| NADH-ubiquinone oxidoreductase chain C [Collimonas fungivorans Ter331] Length = 198 Score = 359 bits (922), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 166/198 (83%), Positives = 188/198 (94%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVSLGEITVVVKSADYLSAMRVLRDHADTRFEELMDL 60 MTTKLETLEAA+RNALG LQ+L V+ GEIT+VVK+++YLSAMRVLRDHADTRFEEL+DL Sbjct: 1 MTTKLETLEAAVRNALGDDLQSLAVAFGEITIVVKASNYLSAMRVLRDHADTRFEELIDL 60 Query: 61 CGVDYSTYGDGVWDGPRFAVVSHLLSLTHNWRVRVRVFAPDDELPLVASVMNIWSAANWY 120 CGVDYSTYGDG WDG RFA VSHLLS+ HNWR+RVRVFAPDDE+P++AS+ +IW++ANWY Sbjct: 61 CGVDYSTYGDGAWDGARFAAVSHLLSIEHNWRLRVRVFAPDDEMPMLASLTDIWASANWY 120 Query: 121 ERETFDFYGILFDGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 ERE FDF+GILF+GH+DLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 Query: 181 EPREITPRVIREENYGIK 198 +PREITPRVIREE+YGIK Sbjct: 181 DPREITPRVIREEHYGIK 198 >ref|YP_001353154.1| NADH dehydrogenase I chain C [Janthinobacterium sp. Marseille] sp|A6SY07.1|NUOC_JANMA RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C gb|ABR89190.1| NADH dehydrogenase I chain C [Janthinobacterium sp. Marseille] Length = 198 Score = 347 bits (890), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 162/198 (81%), Positives = 181/198 (91%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVSLGEITVVVKSADYLSAMRVLRDHADTRFEELMDL 60 MT KLE LEAALRNALG LQ+LT +LGE+T+VVKS DY SAMRVLRDHAD RFEE++DL Sbjct: 1 MTIKLELLEAALRNALGDQLQSLTQALGEVTIVVKSHDYASAMRVLRDHADLRFEEMIDL 60 Query: 61 CGVDYSTYGDGVWDGPRFAVVSHLLSLTHNWRVRVRVFAPDDELPLVASVMNIWSAANWY 120 CGVDYSTYGDG+W+GPRFAVVSHLLS+ HNWRVRVRVFA DDE+P+VAS+++IW+ ANWY Sbjct: 61 CGVDYSTYGDGLWEGPRFAVVSHLLSIKHNWRVRVRVFAADDEMPVVASMIDIWATANWY 120 Query: 121 ERETFDFYGILFDGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 ERE FDF+GILF+GH+DLRRILTDYGFIGHPFRKDFPVSGYVEMRYD EQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180 Query: 181 EPREITPRVIREENYGIK 198 +PRE PRVIREE YG K Sbjct: 181 DPRENVPRVIREEQYGAK 198 >ref|YP_001100104.1| putative NADH-quinone oxidoreductase chain C [Herminiimonas arsenicoxydans] sp|A4G642.1|NUOC_HERAR RecName: Full=NADH-quinone oxidoreductase subunit C; AltName: Full=NADH dehydrogenase I subunit C; AltName: Full=NDH-1 subunit C emb|CAL61979.1| NADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C) (NDH-1, chain C) [Herminiimonas arsenicoxydans] Length = 198 Score = 347 bits (890), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 164/198 (82%), Positives = 179/198 (90%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVSLGEITVVVKSADYLSAMRVLRDHADTRFEELMDL 60 MT KLE LE+ALRNALG LQ+LT++LGEIT+VV S DY SAMRVLRDHAD RFEEL+DL Sbjct: 1 MTIKLELLESALRNALGDQLQSLTLALGEITIVVNSRDYASAMRVLRDHADLRFEELIDL 60 Query: 61 CGVDYSTYGDGVWDGPRFAVVSHLLSLTHNWRVRVRVFAPDDELPLVASVMNIWSAANWY 120 CGVDYSTYGDG WDG RFAVVSHLLS+THNWRVRVRVFA DDE+P+VAS+ IW AANWY Sbjct: 61 CGVDYSTYGDGAWDGQRFAVVSHLLSITHNWRVRVRVFASDDEMPVVASMTEIWPAANWY 120 Query: 121 ERETFDFYGILFDGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 ERE FDF+GILF+GH+DLRRILTDYGFIGHPFRKDFPVSGYVEMRYD EQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHNDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180 Query: 181 EPREITPRVIREENYGIK 198 +PRE PRVIREE YG+K Sbjct: 181 DPRENVPRVIREEQYGMK 198 >ref|ZP_08276194.1| NADH-ubiquinone oxidoreductase chain C [Oxalobacteraceae bacterium IMCC9480] gb|EGF30333.1| NADH-ubiquinone oxidoreductase chain C [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 342 bits (876), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 160/198 (80%), Positives = 182/198 (91%) Query: 1 MTTKLETLEAALRNALGGYLQNLTVSLGEITVVVKSADYLSAMRVLRDHADTRFEELMDL 60 MTTKL+ L+AAL +ALG ++ +LT +LGEIT+V+K + YLSAMRVLRDH DTRFE+L+DL Sbjct: 1 MTTKLDNLQAALHSALGDHIVSLTNALGEITLVIKDSHYLSAMRVLRDHPDTRFEQLLDL 60 Query: 61 CGVDYSTYGDGVWDGPRFAVVSHLLSLTHNWRVRVRVFAPDDELPLVASVMNIWSAANWY 120 GVD+STYGDG WDG RFAVVSHLLSLTHNWRVRVRVFA DDE+P+VAS+++IWS+ANWY Sbjct: 61 AGVDFSTYGDGAWDGRRFAVVSHLLSLTHNWRVRVRVFASDDEVPVVASLIDIWSSANWY 120 Query: 121 ERETFDFYGILFDGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDAEQKRVIYQPVTI 180 ERE FDF+GILF+GHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYD EQKRVIYQPVTI Sbjct: 121 EREAFDFFGILFEGHDDLRRILTDYGFIGHPFRKDFPVSGYVEMRYDPEQKRVIYQPVTI 180 Query: 181 EPREITPRVIREENYGIK 198 EPRE+ PRVIREE YGIK Sbjct: 181 EPREVVPRVIREEQYGIK 198