BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0312.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_900612.1| NADH dehydrogenase subunit B [Chromobacterium v...   239   1e-61
ref|ZP_03697929.1| NADH-quinone oxidoreductase, B subunit [Lutie...   239   1e-61
ref|YP_295185.1| NADH dehydrogenase subunit B [Ralstonia eutroph...   239   1e-61
ref|YP_391088.1| NADH dehydrogenase subunit B [Thiomicrospira cr...   239   1e-61
ref|YP_001353153.1| NADH dehydrogenase I chain B [Janthinobacter...   239   1e-61

>ref|NP_900612.1| NADH dehydrogenase subunit B [Chromobacterium violaceum ATCC 12472]
 sp|Q7NZI0.1|NUOB1_CHRVO RecName: Full=NADH-quinone oxidoreductase subunit B 1; AltName:
           Full=NADH dehydrogenase I subunit B 1; AltName:
           Full=NDH-1 subunit B 1
 gb|AAQ58616.1| NADH-ubiquinone oxidoreductase, chain B [Chromobacterium violaceum
           ATCC 12472]
          Length = 158

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/117 (94%), Positives = 116/117 (99%)

Query: 1   MMHVGASRYDLDRFGIMFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 60
           MMH GA+RYDLDRFG++FRPSPRQSD+MIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS
Sbjct: 42  MMHAGAARYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 101

Query: 61  CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKIKRTNTIAR 117
           CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG+IQLQNKIKRTNTIAR
Sbjct: 102 CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKRTNTIAR 158


>ref|ZP_03697929.1| NADH-quinone oxidoreductase, B subunit [Lutiella nitroferrum 2002]
 ref|YP_004845864.1| NADH dehydrogenase (ubiquinone) subunit B [Pseudogulbenkiania sp.
           NH8B]
 gb|EEG09491.1| NADH-quinone oxidoreductase, B subunit [Lutiella nitroferrum 2002]
 dbj|BAK75450.1| NADH dehydrogenase (ubiquinone), B subunit [Pseudogulbenkiania sp.
           NH8B]
          Length = 158

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/117 (94%), Positives = 116/117 (99%)

Query: 1   MMHVGASRYDLDRFGIMFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 60
           MMH GA+RYDLDRFG++FRPSPRQSD+MIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS
Sbjct: 42  MMHAGAARYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 101

Query: 61  CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKIKRTNTIAR 117
           CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG+IQLQNKIKRTNTIAR
Sbjct: 102 CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKRTNTIAR 158


>ref|YP_295185.1| NADH dehydrogenase subunit B [Ralstonia eutropha JMP134]
 sp|Q473U2.1|NUOB_RALEJ RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 gb|AAZ60341.1| NADH dehydrogenase subunit B [Ralstonia eutropha JMP134]
          Length = 160

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/117 (94%), Positives = 116/117 (99%)

Query: 1   MMHVGASRYDLDRFGIMFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 60
           MMH GA+RYDLDRFG++FRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS
Sbjct: 42  MMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 101

Query: 61  CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKIKRTNTIAR 117
           CANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGVIQLQNKIKRTNTIAR
Sbjct: 102 CANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQNKIKRTNTIAR 158


>ref|YP_391088.1| NADH dehydrogenase subunit B [Thiomicrospira crunogena XCL-2]
 sp|Q31HF9.1|NUOB_THICR RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 gb|ABB41414.1| NADH dehydrogenase I chain B [Thiomicrospira crunogena XCL-2]
          Length = 158

 Score =  239 bits (609), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/117 (96%), Positives = 115/117 (98%)

Query: 1   MMHVGASRYDLDRFGIMFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 60
           MMH GASRYDLDRFGI+FRPSPRQSDVMIVAGTL NKMAPALRKVYDQMAEPRWVISMGS
Sbjct: 42  MMHAGASRYDLDRFGIIFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGS 101

Query: 61  CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKIKRTNTIAR 117
           CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG+IQLQNKIKRTNTIAR
Sbjct: 102 CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKRTNTIAR 158


>ref|YP_001353153.1| NADH dehydrogenase I chain B [Janthinobacterium sp. Marseille]
 sp|A6SY06.1|NUOB_JANMA RecName: Full=NADH-quinone oxidoreductase subunit B; AltName:
           Full=NADH dehydrogenase I subunit B; AltName: Full=NDH-1
           subunit B
 gb|ABR88665.1| NADH dehydrogenase I chain B [Janthinobacterium sp. Marseille]
          Length = 158

 Score =  239 bits (609), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/117 (94%), Positives = 116/117 (99%)

Query: 1   MMHVGASRYDLDRFGIMFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 60
           MMH GASRYDLDRFG++FRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS
Sbjct: 42  MMHAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGS 101

Query: 61  CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQNKIKRTNTIAR 117
           CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYG++QLQNKI+RTNTIAR
Sbjct: 102 CANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNKIRRTNTIAR 158