BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0308.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001353150.1| triosephosphate isomerase [Janthinobacterium... 370 e-101 ref|YP_004752244.1| Triosephosphate isomerase [Collimonas fungiv... 363 2e-98 ref|YP_003775186.1| triosephosphate isomerase [Herbaspirillum se... 350 1e-94 ref|YP_001100108.1| triosephosphate isomerase [Herminiimonas ars... 349 2e-94 ref|YP_001899782.1| triosephosphate isomerase [Ralstonia pickett... 327 1e-87 >ref|YP_001353150.1| triosephosphate isomerase [Janthinobacterium sp. Marseille] sp|A6SY03.1|TPIS_JANMA RecName: Full=Triosephosphate isomerase; Short=TIM; AltName: Full=Triose-phosphate isomerase gb|ABR88757.1| triosephosphate isomerase [Janthinobacterium sp. Marseille] Length = 248 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/250 (72%), Positives = 212/250 (84%), Gaps = 2/250 (0%) Query: 1 MRRKLVAGNWKMNGGLAANAALVADVKAGLAAVGANADVAVCVPAPYLAQVQAAVAGSAL 60 MRRKLVAGNWKMNG LAAN L+ ++K+GL A +DVAVCVP+PY AQ Q + G+A+ Sbjct: 1 MRRKLVAGNWKMNGSLAANTLLLTEIKSGLG--NATSDVAVCVPSPYFAQCQGLLNGAAI 58 Query: 61 ALGSQDVSAHASGAYTGEVSAVMLAEFGCKYAIVGHSERRAYHGENDAAVAAKTAAALKA 120 ALG+QDVS+H +GAYTGEVS ML EF C+Y IVGHSERRAY E + +A KT AL A Sbjct: 59 ALGAQDVSSHEAGAYTGEVSTSMLQEFDCRYVIVGHSERRAYFAETNELIAQKTVRALNA 118 Query: 121 GLTPIVCVGETLAEREAGRTNAVVGGQLDVVLAALDASDVQKIVVAYEPVWAIGTGKTAT 180 GLTPIVCVGETL +REAG+T++VV QL+VVLA++ ASD+ KIVVAYEPVWAIGTGKTAT Sbjct: 119 GLTPIVCVGETLDQREAGQTDSVVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTAT 178 Query: 181 PDMAQDVHAMLRARLAAKNADAAVRVQILYGGSMKPDNAKELLAMSDIDGGLIGGAALKA 240 P MAQ+VHAMLR +L AKNA+AA++V+ILYGGSMKP+NAKELLAMSDIDGGLIGGAALKA Sbjct: 179 PAMAQEVHAMLRKQLQAKNAEAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKA 238 Query: 241 ADFLAIVQAA 250 ADFLAIV AA Sbjct: 239 ADFLAIVHAA 248 >ref|YP_004752244.1| Triosephosphate isomerase [Collimonas fungivorans Ter331] gb|AEK61421.1| Triosephosphate isomerase [Collimonas fungivorans Ter331] Length = 257 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 186/251 (74%), Positives = 205/251 (81%), Gaps = 2/251 (0%) Query: 1 MRRKLVAGNWKMNGGLAANAALVADVKAGLAAVGANADVAVCVPAPYLAQVQAAVAGSAL 60 MRRKLVAGNWKMNG L ANAAL+A++KAGLA A D+A+C PAPY AQ QA +AGSA+ Sbjct: 9 MRRKLVAGNWKMNGSLVANAALLAEIKAGLAV--AACDIAICAPAPYFAQCQAELAGSAI 66 Query: 61 ALGSQDVSAHASGAYTGEVSAVMLAEFGCKYAIVGHSERRAYHGENDAAVAAKTAAALKA 120 A G QDVSAHA GAYTGEV+ ML +F C+Y IVGHSERRAYH E+D VA K AL A Sbjct: 67 AWGGQDVSAHAGGAYTGEVAVSMLQDFACRYVIVGHSERRAYHAESDGLVAQKALRALLA 126 Query: 121 GLTPIVCVGETLAEREAGRTNAVVGGQLDVVLAALDASDVQKIVVAYEPVWAIGTGKTAT 180 G+TPIVCVGETL EREAG+T+AVVG QL VL LDA+D+ +IVVAYEPVWAIGTGKTAT Sbjct: 127 GVTPIVCVGETLVEREAGQTDAVVGRQLAAVLDVLDAADLARIVVAYEPVWAIGTGKTAT 186 Query: 181 PDMAQDVHAMLRARLAAKNADAAVRVQILYGGSMKPDNAKELLAMSDIDGGLIGGAALKA 240 P MAQDVH LRA LA KN AAV V+ILYGGSMKPDNA ELLAM DIDGGLIGGAALKA Sbjct: 187 PQMAQDVHLALRAMLAGKNPTAAVEVKILYGGSMKPDNAAELLAMPDIDGGLIGGAALKA 246 Query: 241 ADFLAIVQAAQ 251 DFLAIV AA+ Sbjct: 247 VDFLAIVAAAR 257 >ref|YP_003775186.1| triosephosphate isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ63278.1| triosephosphate isomerase protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 203/250 (81%), Positives = 223/250 (89%), Gaps = 2/250 (0%) Query: 1 MRRKLVAGNWKMNGGLAANAALVADVKAGLAAVGANADVAVCVPAPYLAQVQAAVAGSAL 60 MRRKLVAGNWKMNG LAANAALVA +K GLAA DVAVCVPAPYLAQVQA VAGS + Sbjct: 1 MRRKLVAGNWKMNGSLAANAALVAGIKEGLAAQAC--DVAVCVPAPYLAQVQALVAGSPV 58 Query: 61 ALGSQDVSAHASGAYTGEVSAVMLAEFGCKYAIVGHSERRAYHGENDAAVAAKTAAALKA 120 LG+QD+SAHASGAYTGEVSA ML EFG +Y I+GHSERRAYHGE+DAAVAAKT AALKA Sbjct: 59 GLGAQDMSAHASGAYTGEVSASMLQEFGVQYVILGHSERRAYHGESDAAVAAKTVAALKA 118 Query: 121 GLTPIVCVGETLAEREAGRTNAVVGGQLDVVLAALDASDVQKIVVAYEPVWAIGTGKTAT 180 GL P+VCVGETL +REAG+TNAVVGGQLDVVLAAL A + +IVVAYEPVWAIGTGKTAT Sbjct: 119 GLVPLVCVGETLEQREAGQTNAVVGGQLDVVLAALSAEEAARIVVAYEPVWAIGTGKTAT 178 Query: 181 PDMAQDVHAMLRARLAAKNADAAVRVQILYGGSMKPDNAKELLAMSDIDGGLIGGAALKA 240 P+MAQ+VHAMLRARL AK+A+AA +V ILYGGSMKPDNA++LLAM DIDGGLIGGAALKA Sbjct: 179 PEMAQEVHAMLRARLGAKSAEAAAKVCILYGGSMKPDNAQQLLAMGDIDGGLIGGAALKA 238 Query: 241 ADFLAIVQAA 250 ADFLAI+ AA Sbjct: 239 ADFLAIINAA 248 >ref|YP_001100108.1| triosephosphate isomerase [Herminiimonas arsenicoxydans] sp|A4G646.1|TPIS_HERAR RecName: Full=Triosephosphate isomerase; Short=TIM; AltName: Full=Triose-phosphate isomerase emb|CAL61983.1| triosephosphate isomerase (TIM) (Triose-phosphate isomerase) [Herminiimonas arsenicoxydans] Length = 248 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 180/250 (72%), Positives = 205/250 (82%), Gaps = 2/250 (0%) Query: 1 MRRKLVAGNWKMNGGLAANAALVADVKAGLAAVGANADVAVCVPAPYLAQVQAAVAGSAL 60 MRRKLVAGNWKMNG LAANA L+A++KA DVAVCVPAPYLAQ + ++ S + Sbjct: 1 MRRKLVAGNWKMNGSLAANALLLAEIKAEFG--NPACDVAVCVPAPYLAQCLSLLSDSTI 58 Query: 61 ALGSQDVSAHASGAYTGEVSAVMLAEFGCKYAIVGHSERRAYHGENDAAVAAKTAAALKA 120 ALG+QDVS+H SGAYTGEVS ML EF C+Y IVGHSERRAY GE + VA KT AL A Sbjct: 59 ALGAQDVSSHDSGAYTGEVSTAMLLEFACRYVIVGHSERRAYFGETNELVAQKTVRALSA 118 Query: 121 GLTPIVCVGETLAEREAGRTNAVVGGQLDVVLAALDASDVQKIVVAYEPVWAIGTGKTAT 180 GL PIVCVGETL +REAG+T+ VVG Q+D VL+++ +D+ KIVVAYEPVWAIGTGKTAT Sbjct: 119 GLMPIVCVGETLEQREAGQTDEVVGRQIDAVLSSIAENDLAKIVVAYEPVWAIGTGKTAT 178 Query: 181 PDMAQDVHAMLRARLAAKNADAAVRVQILYGGSMKPDNAKELLAMSDIDGGLIGGAALKA 240 P+MAQ+VH MLR RL AKNA AA V+ILYGGSMKPDNAKELLAM DIDGGLIGGAALKA Sbjct: 179 PEMAQEVHVMLRRRLHAKNAQAATEVRILYGGSMKPDNAKELLAMPDIDGGLIGGAALKA 238 Query: 241 ADFLAIVQAA 250 ADFLAI++AA Sbjct: 239 ADFLAIIRAA 248 >ref|YP_001899782.1| triosephosphate isomerase [Ralstonia pickettii 12J] gb|ACD27350.1| Triose-phosphate isomerase [Ralstonia pickettii 12J] Length = 248 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 166/248 (66%), Positives = 194/248 (78%), Gaps = 3/248 (1%) Query: 2 RRKLVAGNWKMNGGLAANAALVADVKAGLAAVGANADVAVCVPAPYLAQVQAAVAGSALA 61 R KLV GNWK++G L+ NAAL+ +KA A NA +AVCVP PYLAQ Q+ +AGSA+ Sbjct: 4 RPKLVVGNWKLHGSLSTNAALLEQIKA---AGKTNATLAVCVPFPYLAQCQSLLAGSAVG 60 Query: 62 LGSQDVSAHASGAYTGEVSAVMLAEFGCKYAIVGHSERRAYHGENDAAVAAKTAAALKAG 121 G+QDVSA GA+TGEV+A ML+EFGC YAIVGHSERR+YHGE DA VA K AL+ G Sbjct: 61 WGAQDVSAETRGAFTGEVAASMLSEFGCGYAIVGHSERRSYHGETDAQVATKALRALEHG 120 Query: 122 LTPIVCVGETLAEREAGRTNAVVGGQLDVVLAALDASDVQKIVVAYEPVWAIGTGKTATP 181 +TPIVCVGETLA+REAG T VV QLD VL AL + +IVVAYEPVWAIGTGKTAT Sbjct: 121 ITPIVCVGETLAQREAGETEQVVARQLDAVLEALSVEQLGRIVVAYEPVWAIGTGKTATS 180 Query: 182 DMAQDVHAMLRARLAAKNADAAVRVQILYGGSMKPDNAKELLAMSDIDGGLIGGAALKAA 241 + AQ VHA LRAR+AA++A A R+ ILYGGS+KPDNA EL AM+DIDGGLIGGA+LKA Sbjct: 181 EQAQAVHAFLRARVAARDAGVAQRLSILYGGSVKPDNAGELFAMADIDGGLIGGASLKAE 240 Query: 242 DFLAIVQA 249 DFLAI +A Sbjct: 241 DFLAIGRA 248