BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0305.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775183.1| allophanate hydrolase subunit 1 [Herbaspiril... 320 1e-85 ref|YP_004229817.1| Allophanate hydrolase subunit 1 [Burkholderi... 283 2e-74 ref|ZP_02887185.1| Allophanate hydrolase subunit 1 [Burkholderia... 281 4e-74 ref|YP_004157291.1| allophanate hydrolase subunit 1 [Variovorax ... 281 5e-74 ref|YP_001897353.1| allophanate hydrolase subunit 1 [Burkholderi... 277 7e-73 >ref|YP_003775183.1| allophanate hydrolase subunit 1 [Herbaspirillum seropedicae SmR1] gb|ADJ63275.1| allophanate hydrolase subunit 1 protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 153/216 (70%), Positives = 176/216 (81%) Query: 4 IQPQLHFLGDGALLCNLPPPATLSHQQRIWSLADAAADWPEVAEVVPGMNNLTLILRRPV 63 +QPQLH LGD ALLC+LP PATL QQRIW+LA+ A W EV+EVVPGMNNLTLI RPV Sbjct: 1 MQPQLHPLGDRALLCSLPAPATLPQQQRIWALAELAGQWEEVSEVVPGMNNLTLITTRPV 60 Query: 64 ADMDAVSKRILGSWKHLDIGQLSGRDIDIPVVYGGAGGPDLDAIARHTGLSTAEVIRRHS 123 D++ ++ RI +W L + GR ++IPVVYGG+ GPDLD +ARHTGLST EVI RHS Sbjct: 61 VDLEILAHRIETTWPKLSGERSVGRTVEIPVVYGGSAGPDLDNVARHTGLSTEEVIARHS 120 Query: 124 EGEYVVYFIGFMPGFAYMGGLDPQLATPRQDEPRLSIPAGSVGIGGEQTGIYPLASPGGW 183 EYVVYF+GF+PGFAYMGGLD LATPR PR+SIPAGSVGIGGEQTG+YP+ASPGGW Sbjct: 121 NAEYVVYFLGFLPGFAYMGGLDASLATPRHTTPRVSIPAGSVGIGGEQTGVYPMASPGGW 180 Query: 184 QLLGRTALPLFDPTQNPPTLLRPGDRVRFTVERIVK 219 QL+GRT L LFDP+Q PPTLLRPGDRVRFTVER+ Sbjct: 181 QLIGRTTLQLFDPSQEPPTLLRPGDRVRFTVERVAS 216 >ref|YP_004229817.1| Allophanate hydrolase subunit 1 [Burkholderia sp. CCGE1001] gb|ADX56757.1| Allophanate hydrolase subunit 1 [Burkholderia sp. CCGE1001] Length = 217 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 138/215 (64%), Positives = 162/215 (75%) Query: 3 MIQPQLHFLGDGALLCNLPPPATLSHQQRIWSLADAAADWPEVAEVVPGMNNLTLILRRP 62 M QP + LGD AL+C PPPATL Q+R+W++A+ A DWP V EVVPGMNNLTL+ Sbjct: 1 MSQPHIFPLGDAALVCEAPPPATLDCQRRVWAVAELARDWPHVLEVVPGMNNLTLVFDPL 60 Query: 63 VADMDAVSKRILGSWKHLDIGQLSGRDIDIPVVYGGAGGPDLDAIARHTGLSTAEVIRRH 122 AD DA+SKR+ +W +GRD++IPV YGG GPDL A+A HTGL EVI RH Sbjct: 61 EADRDALSKRLQETWDAAGQAPAAGRDVEIPVQYGGEFGPDLGAVASHTGLGVREVIERH 120 Query: 123 SEGEYVVYFIGFMPGFAYMGGLDPQLATPRQDEPRLSIPAGSVGIGGEQTGIYPLASPGG 182 S G+YVV+F+GF PGFAYMGGLD L TPR+ PRL +PAGSVGIGGEQTGIYP SPGG Sbjct: 121 SSGQYVVFFLGFQPGFAYMGGLDEALHTPRRASPRLEVPAGSVGIGGEQTGIYPATSPGG 180 Query: 183 WQLLGRTALPLFDPTQNPPTLLRPGDRVRFTVERI 217 WQL+GRT LPLFDP + PPTLL+PGDRVRFT+ I Sbjct: 181 WQLIGRTELPLFDPARRPPTLLQPGDRVRFTIAGI 215 >ref|ZP_02887185.1| Allophanate hydrolase subunit 1 [Burkholderia graminis C4D1M] gb|EDT07231.1| Allophanate hydrolase subunit 1 [Burkholderia graminis C4D1M] Length = 217 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 137/215 (63%), Positives = 164/215 (76%) Query: 3 MIQPQLHFLGDGALLCNLPPPATLSHQQRIWSLADAAADWPEVAEVVPGMNNLTLILRRP 62 M QP++ LGD AL+C PPPATL Q+R+W+ A+ A DWP V EVVPGMNNLTL+ Sbjct: 1 MSQPKIFPLGDAALVCEAPPPATLDCQRRVWAAAELARDWPHVLEVVPGMNNLTLVFDPL 60 Query: 63 VADMDAVSKRILGSWKHLDIGQLSGRDIDIPVVYGGAGGPDLDAIARHTGLSTAEVIRRH 122 AD +A+++R+ +W +GRD+DIPV YGG GPDL A+A HTGLST EVI RH Sbjct: 61 EADREALAERLQQAWDAAGQAPAAGRDVDIPVQYGGEFGPDLAAVANHTGLSTREVIERH 120 Query: 123 SEGEYVVYFIGFMPGFAYMGGLDPQLATPRQDEPRLSIPAGSVGIGGEQTGIYPLASPGG 182 S G+YVV+F+GF PGFAYMGGL+ L TPR+ PRL +PAGSVGIGGEQTGIYP SPGG Sbjct: 121 SGGQYVVFFLGFQPGFAYMGGLEAALHTPRRASPRLEVPAGSVGIGGEQTGIYPATSPGG 180 Query: 183 WQLLGRTALPLFDPTQNPPTLLRPGDRVRFTVERI 217 WQL+GRT LPLFDP + PPTLL+PGDRVRFT+ I Sbjct: 181 WQLIGRTELPLFDPARRPPTLLQPGDRVRFTIAGI 215 >ref|YP_004157291.1| allophanate hydrolase subunit 1 [Variovorax paradoxus EPS] gb|ADU39180.1| Allophanate hydrolase subunit 1 [Variovorax paradoxus EPS] Length = 220 Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 133/212 (62%), Positives = 161/212 (75%) Query: 6 PQLHFLGDGALLCNLPPPATLSHQQRIWSLADAAADWPEVAEVVPGMNNLTLILRRPVAD 65 P+LH LGD ALLC LP PATL QQRIW+LA A +W V EV+PGMNNLTL + Sbjct: 7 PRLHLLGDAALLCELPAPATLVQQQRIWALAAEAREWSGVGEVLPGMNNLTLTFDPTAIE 66 Query: 66 MDAVSKRILGSWKHLDIGQLSGRDIDIPVVYGGAGGPDLDAIARHTGLSTAEVIRRHSEG 125 +DA++ ++L +W L + GR ++IPV YGG GPDL +A HTG + AEV+RRHS G Sbjct: 67 LDALTAQVLEAWPKLSAKAVEGRLVEIPVAYGGEHGPDLGDVAAHTGFTPAEVVRRHSAG 126 Query: 126 EYVVYFIGFMPGFAYMGGLDPQLATPRQDEPRLSIPAGSVGIGGEQTGIYPLASPGGWQL 185 EYVVY +GF+PGFA+MGGL P+LATPR+ EPR ++PA SVGIGGEQTGIYPL SPGGWQL Sbjct: 127 EYVVYLLGFLPGFAFMGGLAPELATPRRAEPRTAVPARSVGIGGEQTGIYPLVSPGGWQL 186 Query: 186 LGRTALPLFDPTQNPPTLLRPGDRVRFTVERI 217 +GRT+L +FDP PTLLRPGDRVRF VE + Sbjct: 187 IGRTSLEMFDPAAESPTLLRPGDRVRFVVESV 218 >ref|YP_001897353.1| allophanate hydrolase subunit 1 [Burkholderia phytofirmans PsJN] gb|ACD18129.1| Allophanate hydrolase subunit 1 [Burkholderia phytofirmans PsJN] Length = 217 Score = 277 bits (709), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 133/215 (61%), Positives = 161/215 (74%) Query: 3 MIQPQLHFLGDGALLCNLPPPATLSHQQRIWSLADAAADWPEVAEVVPGMNNLTLILRRP 62 M QP++ LGD AL+C PPPATL Q+R+W+ A+AA DWP V EVVPGMNNLTL+ Sbjct: 1 MSQPRIFPLGDAALVCEAPPPATLECQRRVWAAAEAARDWPHVLEVVPGMNNLTLVFDPL 60 Query: 63 VADMDAVSKRILGSWKHLDIGQLSGRDIDIPVVYGGAGGPDLDAIARHTGLSTAEVIRRH 122 AD DA+ + +W + GR+++IPV YGG GPDL +A HTGLS EV+ RH Sbjct: 61 EADRDALVSHLQAAWDAVSDAPALGREVEIPVQYGGEFGPDLQTVANHTGLSVREVVERH 120 Query: 123 SEGEYVVYFIGFMPGFAYMGGLDPQLATPRQDEPRLSIPAGSVGIGGEQTGIYPLASPGG 182 S+G+YVV+F+GF PGFAYMGGL+ L TPR+ PRL +PAGSVGIGGEQTGIYP SPGG Sbjct: 121 SQGDYVVFFLGFQPGFAYMGGLEAALHTPRRASPRLEVPAGSVGIGGEQTGIYPATSPGG 180 Query: 183 WQLLGRTALPLFDPTQNPPTLLRPGDRVRFTVERI 217 WQL+GRT LPLFDP + PPTLL+PGDRVRFT+ I Sbjct: 181 WQLIGRTELPLFDPARRPPTLLQPGDRVRFTIAGI 215