BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0296.p         (61 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775174.1| transmembrane protein [Herbaspirillum serope...   107   6e-22
ref|YP_004753713.1| putative transmembrane protein [Collimonas f...    82   3e-14

>ref|YP_003775174.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63266.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 177

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/56 (87%), Positives = 51/56 (91%)

Query: 6   TEVMRYARIPYEAWNYGFKESGVWNSQMTVYFDDNGIVRKVENGPDPRYDDSRMRF 61
           TEV RYARIP+EAWNYG+KESGVWNSQMTVYF D GIV KVENGPDPRYDDSR RF
Sbjct: 122 TEVTRYARIPFEAWNYGYKESGVWNSQMTVYFTDQGIVEKVENGPDPRYDDSRFRF 177


>ref|YP_004753713.1| putative transmembrane protein [Collimonas fungivorans Ter331]
 gb|AEK62890.1| putative transmembrane protein [Collimonas fungivorans Ter331]
          Length = 165

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 43/53 (81%)

Query: 7   EVMRYARIPYEAWNYGFKESGVWNSQMTVYFDDNGIVRKVENGPDPRYDDSRM 59
           E + Y R+    WNY +KE+GVWNS+MTVYFDD+GIVRK+ENGPDPRY+ SR 
Sbjct: 111 ETIYYDRVKLNGWNYAYKEAGVWNSEMTVYFDDSGIVRKLENGPDPRYEHSRF 163