BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0292.p (337 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775171.1| N-acyl-D-glutamate deacylase [Herbaspirillum... 554 e-156 ref|YP_004751930.1| N-acyl-D-amino-acid deacylase [Collimonas fu... 534 e-150 ref|YP_586903.1| D-aminoacylase [Cupriavidus metallidurans CH34]... 487 e-135 ref|YP_298220.1| N-acyl-D-amino-acid deacylase [Ralstonia eutrop... 478 e-133 ref|ZP_04944743.1| N-acyl-D-aspartate/D-glutamate deacylase [Bur... 473 e-131 >ref|YP_003775171.1| N-acyl-D-glutamate deacylase [Herbaspirillum seropedicae SmR1] gb|ADJ63263.1| N-acyl-D-glutamate deacylase protein [Herbaspirillum seropedicae SmR1] Length = 496 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 261/332 (78%), Positives = 292/332 (87%) Query: 4 FDTSDVSSSAHSCDTLIRNVFLVDGSGNDPVVADVAIAGGRIAAIGALGDWQAQQVMDGT 63 T+ + CD LIR+ ++DGSG +PV ADVA+ GR+AAIG L DWQA Q +D + Sbjct: 2 LSTTHAADGERRCDILIRHALVIDGSGAEPVAADVAVHKGRVAAIGKLDDWQAAQEIDAS 61 Query: 64 GKVLSPGFIDVHTHDDTNVIRMPDMFPKLSQGVTTVVVGNCGISASPVTLKGDPPDPMNL 123 G+VLSPGFIDVHTHDDTNVIR P+MFPKLSQGVTTVVVGNCGISA+PVTLKG+PPDPMNL Sbjct: 62 GRVLSPGFIDVHTHDDTNVIRTPEMFPKLSQGVTTVVVGNCGISAAPVTLKGEPPDPMNL 121 Query: 124 LGQSTAFSYPTFASYVAAIGAARPSVNVAALVGHTALRSNHMDRLDRAASDAEIVGMREQ 183 LG+ AF YP+FASYV A+ AARP++NVAALVGHTALR+NHMDRLDRAA+++EI GMR Q Sbjct: 122 LGKREAFHYPSFASYVEAVNAARPAINVAALVGHTALRNNHMDRLDRAATESEIAGMRAQ 181 Query: 184 LTEALEHGALGLSTGLAYGNAINAPTGEVLALAEPLAEYGAMYATHLRSEFADILVAMDE 243 L EALEHGALGLSTGLAYGNAINAPT EVLALAEPLAE+G +YATHLRSEFADIL AM+E Sbjct: 182 LREALEHGALGLSTGLAYGNAINAPTEEVLALAEPLAEFGGLYATHLRSEFADILDAMEE 241 Query: 244 AFRIGKHARVPVVISHLKCAGVENWGRSSEVLAALEQAEKHQHVGCDCYPYTASSSTLDL 303 +FRIGKHARVPVVISHLKCAGVENWGRSSEVL ALE+A +HQHVGCDCYPYTASSSTLDL Sbjct: 242 SFRIGKHARVPVVISHLKCAGVENWGRSSEVLHALERAARHQHVGCDCYPYTASSSTLDL 301 Query: 304 KQVTDTYPIQVTWSEPHPEQGGKLLSEIAAGW 335 KQVT Y IQVTWSEPHPEQGGK+L +IAA W Sbjct: 302 KQVTGDYDIQVTWSEPHPEQGGKMLKQIAAEW 333 >ref|YP_004751930.1| N-acyl-D-amino-acid deacylase [Collimonas fungivorans Ter331] gb|AEK61107.1| N-acyl-D-amino-acid deacylase [Collimonas fungivorans Ter331] Length = 511 Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust. Identities = 262/329 (79%), Positives = 288/329 (87%), Gaps = 8/329 (2%) Query: 15 SCDTLIRNVFLVDGSGNDPVVADVAIAGGRI--------AAIGALGDWQAQQVMDGTGKV 66 SCDTLIRNV ++DGSG+ VADVA+AGGRI A+ GAL WQAQQV+DG+GKV Sbjct: 16 SCDTLIRNVSVIDGSGSAAYVADVALAGGRILHIEPHGNASAGALSGWQAQQVVDGSGKV 75 Query: 67 LSPGFIDVHTHDDTNVIRMPDMFPKLSQGVTTVVVGNCGISASPVTLKGDPPDPMNLLGQ 126 LSPGFIDVHTHDDTNVIR P+M PKLSQGVTTVVVGNCGISA+PV+LK +PPDPMNLLG+ Sbjct: 76 LSPGFIDVHTHDDTNVIRTPNMLPKLSQGVTTVVVGNCGISAAPVSLKAEPPDPMNLLGE 135 Query: 127 STAFSYPTFASYVAAIGAARPSVNVAALVGHTALRSNHMDRLDRAASDAEIVGMREQLTE 186 ++AFSYPTFASYV A+ A+P++NVAAL+GHTALRSN MDRLDRAA+ EI M EQL E Sbjct: 136 ASAFSYPTFASYVDAVNQAQPAINVAALIGHTALRSNQMDRLDRAATATEIAAMCEQLRE 195 Query: 187 ALEHGALGLSTGLAYGNAINAPTGEVLALAEPLAEYGAMYATHLRSEFADILVAMDEAFR 246 ALEHGALGLSTGLAYGNAINAPT EVLALAEPLAE GA+YATHLRSEFADIL AMDEAFR Sbjct: 196 ALEHGALGLSTGLAYGNAINAPTAEVLALAEPLAEAGAIYATHLRSEFADILEAMDEAFR 255 Query: 247 IGKHARVPVVISHLKCAGVENWGRSSEVLAALEQAEKHQHVGCDCYPYTASSSTLDLKQV 306 IGKHARVPVVISHLKCAGVENWGRS EVL ALEQA+++Q VGCDCYPYTASSSTLDLKQV Sbjct: 256 IGKHARVPVVISHLKCAGVENWGRSGEVLEALEQAQRYQPVGCDCYPYTASSSTLDLKQV 315 Query: 307 TDTYPIQVTWSEPHPEQGGKLLSEIAAGW 335 TDT I VTWSEP P GGKLL++IAA W Sbjct: 316 TDTIDIMVTWSEPEPAMGGKLLADIAAEW 344 >ref|YP_586903.1| D-aminoacylase [Cupriavidus metallidurans CH34] gb|ABF11634.1| D-aminoacylase (N-acyl-D-amino-acid deacylase) [Cupriavidus metallidurans CH34] Length = 487 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 245/325 (75%), Positives = 273/325 (84%), Gaps = 3/325 (0%) Query: 14 HSCDTLIRNVFLVDGSGNDPVVADVAIAGGRIAAI---GALGDWQAQQVMDGTGKVLSPG 70 H DTLIR V L+DGSG +ADVAI GRIA I GA+ A V++G G VLSPG Sbjct: 3 HLFDTLIRCVLLLDGSGAAARLADVAIRDGRIARIDEPGAIDPDSASNVVEGHGLVLSPG 62 Query: 71 FIDVHTHDDTNVIRMPDMFPKLSQGVTTVVVGNCGISASPVTLKGDPPDPMNLLGQSTAF 130 FIDVHTHDDTNV+R P M PK+SQGVTTVVVGNCGISA+PVTL GDPPDPMNLLG++ AF Sbjct: 63 FIDVHTHDDTNVVREPAMTPKISQGVTTVVVGNCGISAAPVTLAGDPPDPMNLLGRADAF 122 Query: 131 SYPTFASYVAAIGAARPSVNVAALVGHTALRSNHMDRLDRAASDAEIVGMREQLTEALEH 190 YP F +YVAA+ AA+P+VNVAALVGHTALRSNHMDRLDR A++AE MR QL EAL+H Sbjct: 123 RYPDFKTYVAAVNAAKPAVNVAALVGHTALRSNHMDRLDRPATEAETAAMRGQLQEALDH 182 Query: 191 GALGLSTGLAYGNAINAPTGEVLALAEPLAEYGAMYATHLRSEFADILVAMDEAFRIGKH 250 GALGLSTGLAY NA +APT EVLALAEPLA+ GA+YATHLRSEFA+IL AMDEAFRIG+H Sbjct: 183 GALGLSTGLAYANAFHAPTDEVLALAEPLAKAGAIYATHLRSEFAEILDAMDEAFRIGRH 242 Query: 251 ARVPVVISHLKCAGVENWGRSSEVLAALEQAEKHQHVGCDCYPYTASSSTLDLKQVTDTY 310 ARVPVVISHLKCAGV NWGRS EVLAALE AE+ Q VGCDCYPYTASSSTLDLKQVT+ + Sbjct: 243 ARVPVVISHLKCAGVSNWGRSGEVLAALEGAERWQPVGCDCYPYTASSSTLDLKQVTNDF 302 Query: 311 PIQVTWSEPHPEQGGKLLSEIAAGW 335 IQVTWSEPHP GG+LL++IAA W Sbjct: 303 DIQVTWSEPHPTMGGRLLADIAAEW 327 >ref|YP_298220.1| N-acyl-D-amino-acid deacylase [Ralstonia eutropha JMP134] gb|AAZ63376.1| N-acyl-D-amino-acid deacylase [Ralstonia eutropha JMP134] Length = 487 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 241/325 (74%), Positives = 268/325 (82%), Gaps = 3/325 (0%) Query: 14 HSCDTLIRNVFLVDGSGNDPVVADVAIAGGRIAAI---GALGDWQAQQVMDGTGKVLSPG 70 H DTLIR V L+DGSG +ADVA+ GRIA+I GA+ A V++G G VLSPG Sbjct: 3 HLFDTLIRCVMLIDGSGAAARMADVALRDGRIASIDDAGAIDADSAAHVVEGHGLVLSPG 62 Query: 71 FIDVHTHDDTNVIRMPDMFPKLSQGVTTVVVGNCGISASPVTLKGDPPDPMNLLGQSTAF 130 FIDVHTHDDTNV+R P+M PKLSQGVTTV+VGNCGISA+PV L GDPPDPMNLLG + AF Sbjct: 63 FIDVHTHDDTNVVRQPEMTPKLSQGVTTVIVGNCGISAAPVVLSGDPPDPMNLLGHADAF 122 Query: 131 SYPTFASYVAAIGAARPSVNVAALVGHTALRSNHMDRLDRAASDAEIVGMREQLTEALEH 190 YP F SYV A+ AA+PSVNVAALVGHTALRSNHMDR DRAA+ AEI MR QL EAL+H Sbjct: 123 RYPDFRSYVQAVDAAQPSVNVAALVGHTALRSNHMDRFDRAATPAEIAAMRAQLEEALQH 182 Query: 191 GALGLSTGLAYGNAINAPTGEVLALAEPLAEYGAMYATHLRSEFADILVAMDEAFRIGKH 250 GALGLSTGLAY NA +APT EVLALAEPLA GA+YATHLRSEFA+IL AMDEAFRIG+H Sbjct: 183 GALGLSTGLAYANAFSAPTEEVLALAEPLAHAGALYATHLRSEFAEILDAMDEAFRIGRH 242 Query: 251 ARVPVVISHLKCAGVENWGRSSEVLAALEQAEKHQHVGCDCYPYTASSSTLDLKQVTDTY 310 ARVPVVISHLKCAGV NWGRS+EVL AL+ A++ Q VGCDCYPYTASSSTLDLKQVT + Sbjct: 243 ARVPVVISHLKCAGVPNWGRSTEVLDALDAAQRWQPVGCDCYPYTASSSTLDLKQVTSDF 302 Query: 311 PIQVTWSEPHPEQGGKLLSEIAAGW 335 I VTWSE PE GG+LL+EIAA W Sbjct: 303 DIMVTWSEGAPEMGGRLLAEIAAEW 327 >ref|ZP_04944743.1| N-acyl-D-aspartate/D-glutamate deacylase [Burkholderia dolosa AUO158] gb|EAY67914.1| N-acyl-D-aspartate/D-glutamate deacylase [Burkholderia dolosa AUO158] Length = 493 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 229/325 (70%), Positives = 262/325 (80%) Query: 11 SSAHSCDTLIRNVFLVDGSGNDPVVADVAIAGGRIAAIGALGDWQAQQVMDGTGKVLSPG 70 S + DTLI L DG+G PV DVAI G IAAIG L +W A+ V+D G+ L+PG Sbjct: 3 SHPEAADTLIVGAQLYDGTGAPPVTRDVAIRNGTIAAIGNLSNWLAETVVDANGRALAPG 62 Query: 71 FIDVHTHDDTNVIRMPDMFPKLSQGVTTVVVGNCGISASPVTLKGDPPDPMNLLGQSTAF 130 F+DVHTHDDT+VIR P M PK+SQGVTTV+VGNCGISASPVTL GDPPDPMNLLG+ AF Sbjct: 63 FVDVHTHDDTHVIRAPQMLPKISQGVTTVIVGNCGISASPVTLAGDPPDPMNLLGERGAF 122 Query: 131 SYPTFASYVAAIGAARPSVNVAALVGHTALRSNHMDRLDRAASDAEIVGMREQLTEALEH 190 YPTFA YVAA+ ARP+VNVAALVGHTALR+N MDRLDRAA+DAEI MR QL EAL H Sbjct: 123 RYPTFADYVAAVNDARPAVNVAALVGHTALRNNQMDRLDRAATDAEIAAMRAQLEEALAH 182 Query: 191 GALGLSTGLAYGNAINAPTGEVLALAEPLAEYGAMYATHLRSEFADILVAMDEAFRIGKH 250 GALGLS+GLAYG+A APT EV+ALAEPLA GA+Y TH+R+EF IL AMDEA+R+G+H Sbjct: 183 GALGLSSGLAYGSAFAAPTEEVMALAEPLANAGALYTTHMRTEFDAILDAMDEAYRVGRH 242 Query: 251 ARVPVVISHLKCAGVENWGRSSEVLAALEQAEKHQHVGCDCYPYTASSSTLDLKQVTDTY 310 ARVPVVISHLKCAG NWGRS+EVLA+LE+A ++Q VGCDCYPY+ SSSTLDLKQVT Sbjct: 243 ARVPVVISHLKCAGPSNWGRSTEVLASLERARRYQPVGCDCYPYSRSSSTLDLKQVTGDI 302 Query: 311 PIQVTWSEPHPEQGGKLLSEIAAGW 335 I +TWS+PHPE GKLL IAA W Sbjct: 303 DITITWSDPHPEVAGKLLKTIAADW 327