BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0288.p (296 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751927.1| 2-dehydro-3-deoxygluconate kinase [Collimona... 371 e-101 ref|YP_003775168.1| sugar kinase,ribokinase family protein [Herb... 356 3e-96 ref|YP_298223.1| PfkB [Ralstonia eutropha JMP134] >gi|72121193|g... 336 2e-90 ref|YP_840732.1| 2-keto-3-deoxygluconate kinase [Ralstonia eutro... 333 2e-89 ref|YP_004681379.1| 2-keto-3-deoxygluconate kinase KdgK [Cupriav... 333 3e-89 >ref|YP_004751927.1| 2-dehydro-3-deoxygluconate kinase [Collimonas fungivorans Ter331] gb|AEK61104.1| 2-dehydro-3-deoxygluconate kinase [Collimonas fungivorans Ter331] Length = 306 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/240 (73%), Positives = 203/240 (84%) Query: 1 MSKKILAYGEAMVEFNQSIDNPRYYLEGFGGDTSNFCIAAARQGADTAYVSAVGDDHFGK 60 M+ ILAYGEAMVEFNQ + R YL+GFGGDTSNFCIAAARQGA + Y+SA+G+DHFG+ Sbjct: 1 MTTDILAYGEAMVEFNQRQHDARMYLQGFGGDTSNFCIAAARQGARSGYISALGNDHFGQ 60 Query: 61 SLQALWKAERVDDAHVSVVQDAPSGVYFVTHDNAGHHFTYLRSNSAASRYTPAHLPLQAI 120 L+ LW AE+VD +HV+ A +GVYFV+HD GHHF YLR+ SAASRY A LPL AI Sbjct: 61 KLRELWLAEQVDASHVASDAQAATGVYFVSHDQNGHHFDYLRAGSAASRYASAQLPLAAI 120 Query: 121 AEAKVLHLSGISLAISESACDAGLAAMAHARKNGTLTSLDTNLRLRLWPLERARARMAEA 180 A AKVLHLSGISLAIS SACDAGLAAMAHARK+G TSLDTNLRL+LWPLERA+ +M EA Sbjct: 121 AAAKVLHLSGISLAISASACDAGLAAMAHARKHGVRTSLDTNLRLKLWPLERAQEKMREA 180 Query: 181 FALCDICLPSWEDVSALTGLEDRDAIVDKLLGYGVKLVAFKLGKDGCYVATSAERRMVPA 240 FALCDICLPSW+D+SALTGL+DRDAIVD LL YG+ LVAFKLG +GCYVAT+ ERR+VPA Sbjct: 181 FALCDICLPSWDDISALTGLDDRDAIVDTLLSYGIGLVAFKLGAEGCYVATAGERRLVPA 240 >ref|YP_003775168.1| sugar kinase,ribokinase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ63260.1| sugar kinase,ribokinase family protein [Herbaspirillum seropedicae SmR1] Length = 308 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 183/238 (76%), Positives = 201/238 (84%) Query: 1 MSKKILAYGEAMVEFNQSIDNPRYYLEGFGGDTSNFCIAAARQGADTAYVSAVGDDHFGK 60 MSK ILAYGEAMVEFNQ ID PR +L+G+GGDTSNF IAAARQGA +AY+SAVGDDHFG+ Sbjct: 1 MSKTILAYGEAMVEFNQRIDAPRQFLQGYGGDTSNFAIAAARQGAASAYLSAVGDDHFGQ 60 Query: 61 SLQALWKAERVDDAHVSVVQDAPSGVYFVTHDNAGHHFTYLRSNSAASRYTPAHLPLQAI 120 L ALW+ E VD HV++ +G+YFVTHD AGHHF Y R+ SAAS Y LPL+AI Sbjct: 61 DLLALWQREEVDVRHVAIAPGGSTGIYFVTHDAAGHHFHYRRAGSAASAYQAKALPLEAI 120 Query: 121 AEAKVLHLSGISLAISESACDAGLAAMAHARKNGTLTSLDTNLRLRLWPLERARARMAEA 180 A A LHLSGISLAISESAC+AGLAAMAHAR +G TSLDTNLRLRLWPLERARARM EA Sbjct: 121 AAAGALHLSGISLAISESACEAGLAAMAHARASGVTTSLDTNLRLRLWPLERARARMEEA 180 Query: 181 FALCDICLPSWEDVSALTGLEDRDAIVDKLLGYGVKLVAFKLGKDGCYVATSAERRMV 238 F LCDICLPSWEDVS LTGLEDRDAIVD+LL YGVKLVAFKLGK+GCYVATS +RRMV Sbjct: 181 FRLCDICLPSWEDVSLLTGLEDRDAIVDRLLSYGVKLVAFKLGKEGCYVATSDQRRMV 238 >ref|YP_298223.1| PfkB [Ralstonia eutropha JMP134] gb|AAZ63379.1| PfkB [Ralstonia eutropha JMP134] Length = 311 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 169/251 (67%), Positives = 188/251 (74%) Query: 1 MSKKILAYGEAMVEFNQSIDNPRYYLEGFGGDTSNFCIAAARQGADTAYVSAVGDDHFGK 60 MS ILAYGE +VEFNQ D+P YL+GFGGDTSNFCIAAARQ A T Y+SAVG D FG+ Sbjct: 1 MSIDILAYGEPLVEFNQQPDDPTRYLQGFGGDTSNFCIAAARQSATTGYISAVGADSFGE 60 Query: 61 SLQALWKAERVDDAHVSVVQDAPSGVYFVTHDNAGHHFTYLRSNSAASRYTPAHLPLQAI 120 L ALW ERVD HV V AP+GVYFV+HDN GH F YLR SAASRY HLPL AI Sbjct: 61 RLMALWTRERVDTRHVRVDPVAPTGVYFVSHDNHGHRFDYLREGSAASRYQHEHLPLGAI 120 Query: 121 AEAKVLHLSGISLAISESACDAGLAAMAHARKNGTLTSLDTNLRLRLWPLERARARMAEA 180 A+A LHLSGISLAIS SACDAGLAAM HARK GT SLDTNLRLRLW L RAR M EA Sbjct: 121 AQASFLHLSGISLAISTSACDAGLAAMEHARKAGTKVSLDTNLRLRLWSLARARGIMREA 180 Query: 181 FALCDICLPSWEDVSALTGLEDRDAIVDKLLGYGVKLVAFKLGKDGCYVATSAERRMVPA 240 F+L D+CLPSW+D++ LTGL+DRDAIVD LLG G+ LVA KLG++G YVAT R +V Sbjct: 181 FSLTDVCLPSWDDITVLTGLDDRDAIVDYLLGCGIGLVALKLGEEGAYVATPESRTLVQP 240 Query: 241 XCGMPATASAA 251 P A+ A Sbjct: 241 FAVKPVDATGA 251 >ref|YP_840732.1| 2-keto-3-deoxygluconate kinase [Ralstonia eutropha H16] emb|CAJ96002.1| 2-Keto-3-deoxygluconate kinase [Ralstonia eutropha H16] Length = 311 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/251 (66%), Positives = 187/251 (74%) Query: 1 MSKKILAYGEAMVEFNQSIDNPRYYLEGFGGDTSNFCIAAARQGADTAYVSAVGDDHFGK 60 MS ILAYGE +VEFNQ D+P YL+GFGGDTSNFCIAAARQGA T Y+ AVG D FG+ Sbjct: 1 MSIDILAYGEPLVEFNQQPDDPSRYLQGFGGDTSNFCIAAARQGASTGYICAVGADTFGE 60 Query: 61 SLQALWKAERVDDAHVSVVQDAPSGVYFVTHDNAGHHFTYLRSNSAASRYTPAHLPLQAI 120 L+ALW ERVD HV V AP+GVYFV+HDN GH F YLR SAASRY HLPL AI Sbjct: 61 RLRALWTQERVDTRHVRVDPSAPTGVYFVSHDNHGHRFDYLREGSAASRYQHEHLPLGAI 120 Query: 121 AEAKVLHLSGISLAISESACDAGLAAMAHARKNGTLTSLDTNLRLRLWPLERARARMAEA 180 A A+ LHLSGISLAIS SACDAGL AM HARK GT +LDTNLRLRLW L RAR M EA Sbjct: 121 AAARYLHLSGISLAISTSACDAGLDAMEHARKAGTKVTLDTNLRLRLWSLARARGIMREA 180 Query: 181 FALCDICLPSWEDVSALTGLEDRDAIVDKLLGYGVKLVAFKLGKDGCYVATSAERRMVPA 240 L D+CLPSW+D++ LTGL+DRDAIVD LLG G+ LVA KLG++G YVAT R +VP Sbjct: 181 LMLTDVCLPSWDDITVLTGLDDRDAIVDYLLGCGIGLVALKLGEEGSYVATPESRALVPP 240 Query: 241 XCGMPATASAA 251 P A+ A Sbjct: 241 YPVKPVDATGA 251 >ref|YP_004681379.1| 2-keto-3-deoxygluconate kinase KdgK [Cupriavidus necator N-1] gb|AEI80147.1| 2-keto-3-deoxygluconate kinase KdgK [Cupriavidus necator N-1] Length = 311 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 167/251 (66%), Positives = 187/251 (74%) Query: 1 MSKKILAYGEAMVEFNQSIDNPRYYLEGFGGDTSNFCIAAARQGADTAYVSAVGDDHFGK 60 MS ILAYGE +VEFNQ D+P YL+GFGGDTSNFCIAAARQGA T Y+ AVG D FG+ Sbjct: 1 MSIDILAYGEPLVEFNQQPDDPSRYLQGFGGDTSNFCIAAARQGASTGYICAVGADTFGE 60 Query: 61 SLQALWKAERVDDAHVSVVQDAPSGVYFVTHDNAGHHFTYLRSNSAASRYTPAHLPLQAI 120 L+ALW ERVD HV V AP+GVYFV+HDN GH F YLR SAASRY HLPL AI Sbjct: 61 RLRALWTQERVDTRHVRVDPSAPTGVYFVSHDNHGHRFDYLREGSAASRYQHEHLPLGAI 120 Query: 121 AEAKVLHLSGISLAISESACDAGLAAMAHARKNGTLTSLDTNLRLRLWPLERARARMAEA 180 A A+ LHLSGISLAIS SACDAGL AM HARK GT +LDTNLRLRLW L RAR M EA Sbjct: 121 AAARYLHLSGISLAISTSACDAGLDAMEHARKAGTKVTLDTNLRLRLWSLARARGIMREA 180 Query: 181 FALCDICLPSWEDVSALTGLEDRDAIVDKLLGYGVKLVAFKLGKDGCYVATSAERRMVPA 240 L D+CLPSW+D++ LTGL+DRDAIVD LLG G+ LVA KLG++G YVAT R +VP Sbjct: 181 LMLTDVCLPSWDDITVLTGLDDRDAIVDYLLGCGIGLVALKLGEEGSYVATPESRALVPP 240 Query: 241 XCGMPATASAA 251 P A+ A Sbjct: 241 YPVKPIDATGA 251