BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0287.p         (109 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775167.1| methyltransferase [Herbaspirillum seropedica...   115   2e-24
ref|YP_935409.1| hypothetical protein azo3907 [Azoarcus sp. BH72...    91   4e-17
ref|YP_004514782.1| type 11 methyltransferase [Methylomonas meth...    89   3e-16
ref|YP_001793098.1| type 12 methyltransferase [Leptothrix cholod...    84   1e-14
ref|ZP_08824016.1| Methyltransferase type 12 [Thiorhodococcus dr...    83   1e-14

>ref|YP_003775167.1| methyltransferase [Herbaspirillum seropedicae SmR1]
 gb|ADJ63259.1| methyltransferase (contains TPR repeat) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 448

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/108 (57%), Positives = 72/108 (66%)

Query: 1   MAAESQAFDLVLAADTLIYFGDLEKVFDAVASTLRSAGHFVFTVEAVMPEAGQVVGFQLH 60
           +A   Q+ DLV AADT+IYFGDL  V  AVA  LRS GHFVFTVEA+        G  LH
Sbjct: 340 LATHPQSCDLVTAADTMIYFGDLAPVMQAVALALRSGGHFVFTVEALTGADVAPQGHALH 399

Query: 61  PSGRYRHGTDYVMRCLAAAGLTLVSMTEATLREEIRQPVKGVLAVAQR 108
            SGRYRHG DYV   L A G TL+  ++  LREE+RQPV G+L VA+R
Sbjct: 400 ASGRYRHGRDYVRGLLQAHGFTLLHDSDQILREEVRQPVAGMLFVARR 447


>ref|YP_935409.1| hypothetical protein azo3907 [Azoarcus sp. BH72]
 emb|CAL96523.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 449

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 1/105 (0%)

Query: 4   ESQAFDLVLAADTLIYFGDLEKVFDAVASTLRSAGHFVFTVEAVMPEAGQVVGFQLHPSG 63
           E+ + DL+++ADTL YFG L+ VF A A  LR  G  VFTVE   PE G+  G++L P G
Sbjct: 342 EADSQDLIVSADTLCYFGALDAVFGAAARALRGNGTLVFTVELSAPEGGE-HGYRLAPHG 400

Query: 64  RYRHGTDYVMRCLAAAGLTLVSMTEATLREEIRQPVKGVLAVAQR 108
           RY H   YV   LA AG   +S  E  LR E  +PV+G+L  A+R
Sbjct: 401 RYTHAAGYVTGELARAGFGDISCVETDLRTEGGKPVRGLLCAARR 445


>ref|YP_004514782.1| type 11 methyltransferase [Methylomonas methanica MC09]
 gb|AEG02283.1| Methyltransferase type 11 [Methylomonas methanica MC09]
          Length = 445

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 2/100 (2%)

Query: 9   DLVLAADTLIYFGDLEKVFDAVASTLRSAGHFVFTVEAVMPEAGQVVGFQLHPSGRYRHG 68
           D++++ADTL+YFGDLE V  AVA  L   GHFVFTVE    E   + GF++ P GR+ H 
Sbjct: 344 DVIVSADTLVYFGDLEAVCGAVADVLSPGGHFVFTVERT--EESIIQGFKIQPHGRFSHT 401

Query: 69  TDYVMRCLAAAGLTLVSMTEATLREEIRQPVKGVLAVAQR 108
             Y+   + +AGL ++ + +  LR E   PV G L VA++
Sbjct: 402 DVYIKSVMTSAGLAIIKLEKVMLRYEAGVPVDGYLVVARK 441


>ref|YP_001793098.1| type 12 methyltransferase [Leptothrix cholodnii SP-6]
 gb|ACB36333.1| Methyltransferase type 12 [Leptothrix cholodnii SP-6]
          Length = 456

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 8   FDLVLAADTLIYFGDLEKVFDAVASTLRSAGHFVFTVEAVMPEAGQVVGFQLHPSGRYRH 67
           +D++L+ADTL YFGDL +V  A   +LR  G  VFTVEA +P+A     F+L P GRY H
Sbjct: 357 WDVILSADTLCYFGDLHEVIGAAGRSLRPGGTLVFTVEA-LPDALDRP-FRLEPHGRYAH 414

Query: 68  GTDYVMRCLAAAGLTLVSMTEATLREEIRQPVKGVLAVAQR 108
            + ++   +  AGL L+ +    LREE  QPV G L  A+R
Sbjct: 415 ASGHLRAVVEQAGLGLLDLDAVVLREEGGQPVHGWLVAARR 455


>ref|ZP_08824016.1| Methyltransferase type 12 [Thiorhodococcus drewsii AZ1]
 gb|EGV30356.1| Methyltransferase type 12 [Thiorhodococcus drewsii AZ1]
          Length = 452

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)

Query: 8   FDLVLAADTLIYFGDLEKVFDAVASTLRSAGHFVFTVEAVMPEAGQVVGFQLHPSGRYRH 67
           FDL+++ADTL+YFG++  V +A +S+LR  GH  F+VEA+    G    ++L P+GRY H
Sbjct: 348 FDLIVSADTLVYFGEIGPVLEAASSSLRPGGHLGFSVEAL---EGTSDDYRLQPNGRYAH 404

Query: 68  GTDYVMRCLAAAGLTLVSMTEATLREEIRQPVKGVLAVAQRT 109
              Y+ R L   G  L +M   TLR E    V G + +AQR+
Sbjct: 405 SKTYLERTLLERGFDLRAMDRETLRLEGGTQVMGWVVIAQRS 446