BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0280.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775164.1| hypothetical protein Hsero_1743 [Herbaspiril... 224 9e-57 ref|YP_004688423.1| hypothetical protein CNE_BB1p09740 [Cupriavi... 163 2e-38 ref|YP_001237148.1| hypothetical protein BBta_0986 [Bradyrhizobi... 123 3e-26 ref|YP_004750700.1| hypothetical protein CFU_0038 [Collimonas fu... 111 1e-22 ref|ZP_06916585.1| aminoglycoside phosphotransferase [Streptomyc... 107 2e-21 >ref|YP_003775164.1| hypothetical protein Hsero_1743 [Herbaspirillum seropedicae SmR1] gb|ADJ63256.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 238 Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 128/224 (57%), Positives = 149/224 (66%), Gaps = 3/224 (1%) Query: 8 LTVDDETIVGDILDATNSMDVPGALFLHGAGQSQRQRQRLLREELATLGLGSIAFDFSGH 67 L V ET+ D+L S V L LHGAGQ RQRQ LR+ LA G S A DFSGH Sbjct: 15 LAVGAETLAADLLHGPASATV-QTLVLHGAGQGDRQRQWPLRQALALRGCASAAIDFSGH 73 Query: 68 GESSAHTPGSLQKRLRQAEQARQHLDPEHRVHTVVGVSMSGEIAIRLACSDAGDIDHVVL 127 G+SSA P SL KRL +A+ A L R TVVGVSMSGEIA+RLAC I HVV Sbjct: 74 GQSSARQPNSLAKRLAEAQAALDALTVAPR--TVVGVSMSGEIALRLACRPENRIAHVVT 131 Query: 128 MVGAIYDRAAFALPFGPAFSAAIRRPASWRDAETLELIRSYRGGLTIIRALDDTVIPYDV 187 +VGA+YD AAF LPFGPAFSAA+RRP SWRDA L LIR Y G LT+IRA +D VIP +V Sbjct: 132 LVGALYDGAAFELPFGPAFSAALRRPGSWRDATVLALIRRYPGRLTLIRASEDAVIPAEV 191 Query: 188 ADLLMDAAQSARFRRLIDLPGADHRLSEKIAQDAGLRRRIATAI 231 A+L+ A +A R++DLPG DHR+SE+ DA LR R+A I Sbjct: 192 AELIRAHAVAASACRIVDLPGVDHRVSERSQHDALLRERLADLI 235 >ref|YP_004688423.1| hypothetical protein CNE_BB1p09740 [Cupriavidus necator N-1] gb|AEI82385.1| hypothetical protein CNE_BB1p09740 [Cupriavidus necator N-1] Length = 245 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/227 (40%), Positives = 132/227 (58%), Gaps = 4/227 (1%) Query: 6 FELTVDDETIVGDILDATNSMDVPGALFLHGAGQSQRQRQRLLREELATLGLGSIAFDFS 65 F + ET+ D + + L LHGAG S R R LR LA G+G++A DFS Sbjct: 7 FTIDTGTETLAADRIAVRGKVQ---CLLLHGAGMSTRVRWLPLRTALAQHGVGTVAIDFS 63 Query: 66 GHGESSAHTPGSLQKRLRQAEQARQHLDPEHRVHTVVGVSMSGEIAIRLACSDAGDIDHV 125 GHG+SS+ T GSL+KR +A A +H+D + VVG+SMSGEIA+RLA A I V Sbjct: 64 GHGDSSSRTEGSLEKRFDEALLALEHIDADGP-RVVVGISMSGEIAVRLAVDKATHISGV 122 Query: 126 VLMVGAIYDRAAFALPFGPAFSAAIRRPASWRDAETLELIRSYRGGLTIIRALDDTVIPY 185 V +VGA YD AA+ +PFGP F+ +R SWR +E I+S+RG + +I+A +D V+P Sbjct: 123 VTIVGAAYDPAAYQIPFGPEFTRILRSHESWRKSEVFSAIQSFRGRIAVIQAGNDEVVPG 182 Query: 186 DVADLLMDAAQSARFRRLIDLPGADHRLSEKIAQDAGLRRRIATAIS 232 + L+ A A L+ LPG H L+ + + + + +A AI+ Sbjct: 183 MIGSDLIRNASCAEHAELLVLPGVSHALANALDDNPKMTQDVARAIA 229 >ref|YP_001237148.1| hypothetical protein BBta_0986 [Bradyrhizobium sp. BTAi1] gb|ABQ33242.1| hypothetical protein BBta_0986 [Bradyrhizobium sp. BTAi1] Length = 218 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 112/205 (54%), Gaps = 4/205 (1%) Query: 28 VPGALFLHGAGQSQRQRQRLLREELATLGLGSIAFDFSGHGESSA-HTPGSLQKRLRQAE 86 +P L LHGAG S R R L LA LG G++ FDFSGHG+SS + S+ KR+++A Sbjct: 11 LPRVLSLHGAGPSNRARMDYLAAHLARLGWGTVRFDFSGHGDSSGTMSRSSIDKRMQEAL 70 Query: 87 QARQHLDPEHRVHTVVGVSMSGEIAIRLACSDAGDIDHVVLMVGAIYDRAAFALPFGPAF 146 LD + ++G SM G +A+RL S+ H++L A Y A + FGPAF Sbjct: 71 AVATELD-RTKAPVLIGTSMGGHLAVRL--SEDLRPSHLILFCPAAYGAATETITFGPAF 127 Query: 147 SAAIRRPASWRDAETLELIRSYRGGLTIIRALDDTVIPYDVADLLMDAAQSARFRRLIDL 206 + A+RRP S+ ++ I Y G LTII +D +IP +V D + AA+ AR RL L Sbjct: 128 TDALRRPGSYHNSLAYSAISHYAGRLTIIIGAEDEIIPGEVIDRYLAAAKRARSVRLERL 187 Query: 207 PGADHRLSEKIAQDAGLRRRIATAI 231 GA H++ + G R + + + Sbjct: 188 AGAPHQIHGWAVKTPGAERLVLSIV 212 >ref|YP_004750700.1| hypothetical protein CFU_0038 [Collimonas fungivorans Ter331] gb|AEK59877.1| hypothetical protein CFU_0038 [Collimonas fungivorans Ter331] Length = 260 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 112/214 (52%), Gaps = 15/214 (7%) Query: 6 FELTVDDETIVGDILDATNSMDVPGALFLHGAGQSQRQ--RQRLLREELATLGLGSIAFD 63 FE+ D+ + GD A +S V L LHGAG S R + LR L G+ S +FD Sbjct: 29 FEVAYDNFALKGDFHPAASSSHV---LILHGAGASSRATASRSGLRPALQARGVASTSFD 85 Query: 64 FSGHGESSAHTP-GSLQKRLRQAEQ---ARQHLDPEHRVHTVVGVSMSGEIAIRLACSDA 119 GHG++ SL R RQA AR+ P + G SM AIRL + Sbjct: 86 CIGHGDTGGSLQFSSLSSRTRQAAAVIAARKLAQPL----VICGSSMGAYNAIRL--TQT 139 Query: 120 GDIDHVVLMVGAIYDRAAFALPFGPAFSAAIRRPASWRDAETLELIRSYRGGLTIIRALD 179 D+ ++L+V +Y +A+ +PFGP FS IRR SW D++ ++ ++G L +I A Sbjct: 140 HDVAGLILIVPGVYTPSAYNVPFGPQFSTIIRRDHSWADSDAWAILAEFKGKLLVIAAEH 199 Query: 180 DTVIPYDVADLLMDAAQSARFRRLIDLPGADHRL 213 D VIP ++ + L+ +A+ AR RRL + G DH+ Sbjct: 200 DAVIPPEIPERLLLSARKARSRRLRVVAGTDHQC 233 >ref|ZP_06916585.1| aminoglycoside phosphotransferase [Streptomyces sviceus ATCC 29083] gb|EDY59125.1| aminoglycoside phosphotransferase [Streptomyces sviceus ATCC 29083] Length = 543 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 110/211 (52%), Gaps = 6/211 (2%) Query: 29 PGALFLHGAGQSQRQRQRLLREELATLGLGSIAFDFSGHGESSAHTPG-SLQKRLRQAEQ 87 P A+ LHGAG + ++R L +E G ++AFDFSGHGESS SL++R QA Sbjct: 28 PTAVLLHGAGHAAKERLLPLLDEFVAHGCRALAFDFSGHGESSGDLAELSLRRRFEQAVA 87 Query: 88 ARQHLDPEHRVHTVVGVSMSGEIAIRLACSDAGDIDHVVLMVGAIYDRAAFALPFGPA-- 145 P +VG SMSG+ LA + + L A+Y A+ LPFG Sbjct: 88 VIDAHVPGDGPLVLVGFSMSGQTVADLARHYGERVAALGLCAPAVYAGEAWGLPFGRGDG 147 Query: 146 -FSAAIRRPASWRDAETLELIRSYRGGLTIIRALDDTVIPYDVADLLMDAAQ-SARFRRL 203 FS IRRP SWR + LE +R+Y G + D VIP +V +++ +A ++F RL Sbjct: 148 EFSEIIRRPDSWRHSPALEALRAYEGRAVLAVPGTDAVIPPEVTEVVQEALTFRSQFTRL 207 Query: 204 IDLPGADHRLSEKIAQDAGLRRRIATAISAG 234 +LP ++H+L+ + A RR + A+ G Sbjct: 208 -ELPHSEHQLARWLCDHADERRELVAALLTG 237