BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0272.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001099558.1| lipoprotein precursor [Herminiimonas arsenic... 202 4e-50 ref|YP_004752511.1| lipoprotein [Collimonas fungivorans Ter331] ... 200 1e-49 ref|YP_001353825.1| lipoprotein nlpD precursor [Janthinobacteriu... 192 3e-47 ref|YP_003777187.1| NlpD lipoprotein [Herbaspirillum seropedicae... 191 6e-47 gb|EGW60452.1| Peptidase M23 [Dechlorosoma suillum PS] 188 7e-46 >ref|YP_001099558.1| lipoprotein precursor [Herminiimonas arsenicoxydans] emb|CAL61431.1| putative Peptidase M23B [Herminiimonas arsenicoxydans] Length = 304 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 113/256 (44%), Positives = 144/256 (56%), Gaps = 54/256 (21%) Query: 30 YTVRKGDTLMSISRTVGKDHHDIAAWNKLSDANEIYPGDVLRLKPP-------------- 75 YTV+KGDTL I+ G+ + ++ WNKL++ N+I VLR+ PP Sbjct: 49 YTVKKGDTLYRIALDFGQSYSELVTWNKLANPNDIKVDQVLRVAPPDAPAARSGGAQTGA 108 Query: 76 ---ATAAVAAPVSRAKPAAAVHERKAEPKTERE--------------------------- 105 + A A P+S PAA+ K P+ E+ Sbjct: 109 VATGSGAEARPLS--APAASTAGNKTSPRGEKRPYSDSTLADMQKPEGAAVTTPPKAVAS 166 Query: 106 --------AAAPAATEAERLDWMWPAQGKLTATTDRNLKGIDITGTPGQPVWAAEAGKVT 157 AAA E E + WMWPA+GKL AT D N KGIDI G GQ V AA AGKV Sbjct: 167 SDKPAEIPAAAATGAEYETVSWMWPAEGKLVATFDDNKKGIDIAGKSGQQVLAAGAGKVM 226 Query: 158 YAGRGIRGYGNMIIVKHSRTLLSVYAHNKSIMVKEGQTVNRGQQIAEMGDTDSRTVKLYF 217 YAG GIRGYGN++IVKH+ TLLS YAHNK I VKEGQ+V++GQ+IA+MGD+D+ +VKL+F Sbjct: 227 YAGSGIRGYGNLVIVKHTSTLLSAYAHNKIIHVKEGQSVSKGQKIADMGDSDADSVKLHF 286 Query: 218 EIRSNGKALNPVPLLP 233 EIR GK ++P LP Sbjct: 287 EIRQQGKPVDPSKFLP 302 >ref|YP_004752511.1| lipoprotein [Collimonas fungivorans Ter331] gb|AEK61688.1| lipoprotein precursor [Collimonas fungivorans Ter331] Length = 250 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 108/205 (52%), Positives = 139/205 (67%), Gaps = 13/205 (6%) Query: 30 YTVRKGDTLMSISRTVGKDHHDIAAWNKLSDANEIYPGDVLRLKPPATAAVAAPVSRAKP 89 YTV+KGDTL SI+R + + DI AWN+LSD N+I VLR+ P AA + S AKP Sbjct: 56 YTVQKGDTLSSIARKFRRSNSDIIAWNRLSDPNDIKVDQVLRVLPQGAAATSG--STAKP 113 Query: 90 AAAVHERKAEPKTEREAAAPAATE-AERLDWMWPAQGKLTATTDRNLKGIDITGTPGQPV 148 + T+ APAA++ + +DW WPA G+ + + KGIDI G GQPV Sbjct: 114 RS----------TDSADTAPAASDDKDAIDWAWPASGQSGSGLGQGKKGIDIFGQLGQPV 163 Query: 149 WAAEAGKVTYAGRGIRGYGNMIIVKHSRTLLSVYAHNKSIMVKEGQTVNRGQQIAEMGDT 208 AA AGKV Y+G GIRGYGN++I+KH+ +LLSVYAHNK+I+VKEGQ V++GQ+IAEMG + Sbjct: 164 MAAAAGKVMYSGSGIRGYGNLVIIKHNSSLLSVYAHNKTIVVKEGQMVSKGQKIAEMGKS 223 Query: 209 DSRTVKLYFEIRSNGKALNPVPLLP 233 DS VKLYFEIR GK ++P LP Sbjct: 224 DSSAVKLYFEIRRQGKPVDPSRYLP 248 >ref|YP_001353825.1| lipoprotein nlpD precursor [Janthinobacterium sp. Marseille] gb|ABR89363.1| lipoprotein nlpD precursor [Janthinobacterium sp. Marseille] Length = 317 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/268 (41%), Positives = 144/268 (53%), Gaps = 65/268 (24%) Query: 29 SYTVRKGDTLMSISRTVGKDHHDIAAWNKLSDANEIYPGDVLRLKPP----------ATA 78 +YTVRKGDTL I+ G+ + +I AWN L++ N+I G VLR+ PP T Sbjct: 50 TYTVRKGDTLYRIALDFGQSYSEIVAWNNLANPNDIKVGQVLRVAPPDAPVARSGGAQTG 109 Query: 79 AVA-----------APVSRAKPAAAVHERKAEPKTEREAAAPAA---------------- 111 A+A AP S A+A + K P+ E+ + A Sbjct: 110 AIASSSVVESRPLGAPSSTTVSASATN--KTSPRGEKRPYSDATLAEMQKPDSTPVVAAA 167 Query: 112 --------------------------TEAERLDWMWPAQGKLTATTDRNLKGIDITGTPG 145 + + + W+WPA+GK+ T D KG+DI G G Sbjct: 168 PAATPATATAAKPATPAEAAAPVALAADDDSVSWIWPAEGKVVGTFDDGRKGLDIAGKSG 227 Query: 146 QPVWAAEAGKVTYAGRGIRGYGNMIIVKHSRTLLSVYAHNKSIMVKEGQTVNRGQQIAEM 205 Q V AA AGKV YAG GIRGYGN++IVKH+ LLS YAHNK+I+VKEGQ VN+GQ+IAEM Sbjct: 228 QAVLAAGAGKVMYAGSGIRGYGNLVIVKHTSNLLSAYAHNKAILVKEGQNVNKGQKIAEM 287 Query: 206 GDTDSRTVKLYFEIRSNGKALNPVPLLP 233 GD+DS +VKL+FEIR GK ++P LP Sbjct: 288 GDSDSDSVKLHFEIRQQGKPVDPSKFLP 315 >ref|YP_003777187.1| NlpD lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65279.1| NlpD lipoprotein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 106/232 (45%), Positives = 139/232 (59%), Gaps = 19/232 (8%) Query: 19 ACASAPYQGDSYTVRKGDTLMSISRTVGKDHHDIAAWNKLSDANEIYPGDVLRLKPPATA 78 CAS YTV++GDTL SI R + ++ WN+L + +++ G + ++PP Sbjct: 23 GCASTADSDGYYTVKRGDTLYSIGRDFDQSPANLRTWNRLRNPDDLEVGQRILVRPPVGV 82 Query: 79 AVAAPVSRA-----------------KPAAAVHERKAEPKTEREAAAPAATEAERLDWMW 121 ++ KPA + K K + + A PA EA ++DW W Sbjct: 83 VARTGAGQSPRPAASSSPSASGSGSRKPAPSRPTAKPAAKPQDDDA-PAGAEA-KVDWSW 140 Query: 122 PAQGKLTATTDRNLKGIDITGTPGQPVWAAEAGKVTYAGRGIRGYGNMIIVKHSRTLLSV 181 P GK + D KGIDI G+ GQ V AA AGKVTYAG GIRGYGNM+I+KH+ LLSV Sbjct: 141 PTAGKSAPSADSYKKGIDIIGSEGQSVVAAAAGKVTYAGHGIRGYGNMVIIKHTPQLLSV 200 Query: 182 YAHNKSIMVKEGQTVNRGQQIAEMGDTDSRTVKLYFEIRSNGKALNPVPLLP 233 YAHNK+I+VKEGQTV RGQQIA MG++D+ VKLYFEIR NGK +N + +LP Sbjct: 201 YAHNKTILVKEGQTVTRGQQIATMGNSDTNKVKLYFEIRRNGKPINVMAVLP 252 >gb|EGW60452.1| Peptidase M23 [Dechlorosoma suillum PS] Length = 302 Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 119/289 (41%), Positives = 155/289 (53%), Gaps = 59/289 (20%) Query: 5 ISIVAAAVVVAALTACASAPY------------QGDSYTVRKGDTLMSISRTVGKDHHDI 52 +S +AA + +A + A AP D YTV+KGDTL SI+ G+D+ D+ Sbjct: 13 LSGIAALLFLAGCASHAPAPVVERGVPSKPAAASKDFYTVKKGDTLYSIALDNGQDYKDV 72 Query: 53 AAWNKLSDANEIYPGDVLRLKPP----ATAAVAAPV------SRAK-----PAAAVHERK 97 AAWN L + N I G LR+ PP A AVA P+ SR+ PAAA K Sbjct: 73 AAWNNLENPNRILVGQQLRVTPPDGGAAGTAVAKPIGGGVVESRSLDGGPVPAAASDTLK 132 Query: 98 AEPKTEREA----------------------AAPAATEAER---------LDWMWPAQGK 126 EPK +EA A P +EA + W WPA GK Sbjct: 133 REPKAGKEAYSDQAWAKAQNQNNAQGAAAKPAEPVRSEAPAAAAAPAAADVTWAWPAGGK 192 Query: 127 -LTATTDRNLKGIDITGTPGQPVWAAEAGKVTYAGRGIRGYGNMIIVKHSRTLLSVYAHN 185 + + KG+DI G G+PV AA GKV Y+G G+RGYG ++I+KH T LS YAHN Sbjct: 193 SIAGFNEATNKGVDIAGKLGEPVLAAADGKVVYSGSGLRGYGKLVIIKHDATFLSAYAHN 252 Query: 186 KSIMVKEGQTVNRGQQIAEMGDTDSRTVKLYFEIRSNGKALNPVPLLPK 234 +I+VKEGQ+V RGQ+IAEMG++D+ VKL+FEIR GK ++P LPK Sbjct: 253 NNILVKEGQSVTRGQKIAEMGNSDTDQVKLHFEIRRQGKPVDPTQYLPK 301