BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0259.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777201.1| short-chain alcohol dehydrogenase [Herbaspir...   164   3e-39
ref|YP_004415664.1| putative short chain dehydrogenase [Pusillim...   119   1e-25
ref|YP_003166830.1| short-chain dehydrogenase/reductase SDR [Can...   119   2e-25
ref|YP_487926.1| Short-chain dehydrogenase/reductase SDR [Rhodop...   116   1e-24
ref|YP_001237102.1| putative short-chain dehydrogenase [Bradyrhi...   114   4e-24

>ref|YP_003777201.1| short-chain alcohol dehydrogenase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65293.1| short-chain alcohol dehydrogenase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 266

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/91 (81%), Positives = 84/91 (92%)

Query: 19  QQRAAWYAPLGIRANCVLPGLMDTPMIREPLKASYGGDIEEMRRKRHAQCPMGHMGDAWD 78
           +  A  YAP+GIRANCVLPG+MDTPMIREPLKASYGGDIE+MR KR+AQCPMG MGDAWD
Sbjct: 174 KNVAMQYAPMGIRANCVLPGMMDTPMIREPLKASYGGDIEQMRAKRNAQCPMGFMGDAWD 233

Query: 79  VAHAALFLASDAARYVTGVDLIVDGGLSLKC 109
           VAHA+LFLASD ARY+TG+D+IVDGGLSL+C
Sbjct: 234 VAHASLFLASDHARYITGLDMIVDGGLSLRC 264


>ref|YP_004415664.1| putative short chain dehydrogenase [Pusillimonas sp. T7-7]
 gb|AEC19040.1| putative short chain dehydrogenase [Pusillimonas sp. T7-7]
          Length = 268

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 72/93 (77%), Gaps = 3/93 (3%)

Query: 19  QQRAAWYAPLGIRANCVLPGLMDTPMIREP--LKASY-GGDIEEMRRKRHAQCPMGHMGD 75
           +  AA YAP  IR N VLPGLM TPM+     + A Y GGDI+ M RKR +Q PMGHMG+
Sbjct: 174 RTTAAQYAPDKIRVNAVLPGLMKTPMVERSAGMAAEYAGGDIDAMWRKRDSQVPMGHMGE 233

Query: 76  AWDVAHAALFLASDAARYVTGVDLIVDGGLSLK 108
           AWDVA+AALFLASD +RY+TG++L+VDGG++LK
Sbjct: 234 AWDVAYAALFLASDESRYITGIELLVDGGIALK 266


>ref|YP_003166830.1| short-chain dehydrogenase/reductase SDR [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gb|ACV34901.1| short-chain dehydrogenase/reductase SDR [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 267

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/86 (63%), Positives = 67/86 (77%), Gaps = 2/86 (2%)

Query: 25  YAPLGIRANCVLPGLMDTPMIREPLKASYG--GDIEEMRRKRHAQCPMGHMGDAWDVAHA 82
           +AP GIRANCVLPGLM+TP++   L   YG  GDI  + R R AQCP+GHMGDAWD A+A
Sbjct: 180 HAPDGIRANCVLPGLMNTPLVHAALTRVYGEEGDIANLIRTRDAQCPLGHMGDAWDTAYA 239

Query: 83  ALFLASDAARYVTGVDLIVDGGLSLK 108
           ALFLASD A+Y+T  +L+VDGGLS +
Sbjct: 240 ALFLASDEAKYITATELVVDGGLSAR 265


>ref|YP_487926.1| Short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris
           HaA2]
 gb|ABD09015.1| Short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris
           HaA2]
          Length = 290

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 3/88 (3%)

Query: 25  YAPLGIRANCVLPGLMDTPMIREP--LKASYG-GDIEEMRRKRHAQCPMGHMGDAWDVAH 81
           YA   +R NC+LPGLM TPM+     L ASY  GD+E M R R AQ PMGHMGDAWDVA+
Sbjct: 202 YAKDHVRVNCILPGLMKTPMVAHSAGLAASYAAGDVEAMWRARDAQVPMGHMGDAWDVAN 261

Query: 82  AALFLASDAARYVTGVDLIVDGGLSLKC 109
           AALFLASD ++YVTG++L+VDGGL+LK 
Sbjct: 262 AALFLASDESKYVTGLELVVDGGLTLKV 289


>ref|YP_001237102.1| putative short-chain dehydrogenase [Bradyrhizobium sp. BTAi1]
 gb|ABQ33196.1| putative short-chain dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 266

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 72/98 (73%), Gaps = 3/98 (3%)

Query: 15  HEAHQQRAAWYAPLGIRANCVLPGLMDTPMIREP--LKASYG-GDIEEMRRKRHAQCPMG 71
           ++  +  A  +AP  +R N +LPGLM TPM+     L ASY  GD+EEM +KR AQ PMG
Sbjct: 169 NQMTRTTAVEFAPRHVRVNAILPGLMKTPMVEHSAGLAASYAKGDVEEMWKKRDAQVPMG 228

Query: 72  HMGDAWDVAHAALFLASDAARYVTGVDLIVDGGLSLKC 109
           HMGDA+DVA+AALFLASD +RYVTG+ L+VDGGL+ + 
Sbjct: 229 HMGDAFDVANAALFLASDESRYVTGITLVVDGGLTCRS 266