BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0252.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775153.1| transmembrane protein [Herbaspirillum serope... 171 7e-41 ref|YP_001353843.1| hypothetical protein mma_2153 [Janthinobacte... 154 8e-36 ref|YP_001099537.1| hypothetical protein HEAR1234 [Herminiimonas... 149 4e-34 ref|YP_004751913.1| putative transmembrane protein [Collimonas f... 131 7e-29 ref|ZP_07676569.1| conserved hypothetical protein [Ralstonia sp.... 112 3e-23 >ref|YP_003775153.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63245.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 292 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 86/148 (58%), Positives = 109/148 (73%), Gaps = 2/148 (1%) Query: 58 KKPDSKPTWSELTPVQQHALAPLAGEWKKMEFSSKEKWLVIGNKFAAMSPAEQERMQNRM 117 +K D++ W+ L+ Q+ AL PL EW +M KEKWL IG ++A M P EQ+R+ RM Sbjct: 94 RKSDNQLAWTNLSAAQRQALEPLTTEWPRMSELQKEKWLEIGKRYARMKPEEQQRLHERM 153 Query: 118 RDWVKLTPMQRRSVRESYTRAKKLDADQKSAQWKEYQQLSDEQKKKLSQAKLPKHVAALP 177 RDWVKLTP +R + R +Y RAKKLDA++K QW +YQQLS+EQKKKLS+AKLPK VA LP Sbjct: 154 RDWVKLTPAERSAARTNYARAKKLDAEEKHEQWAKYQQLSEEQKKKLSEAKLPKRVAKLP 213 Query: 178 PTPAKAAPTIQLPPEALEQTL--VPPPT 203 +P+ AAPTIQLP EAL++ L VP PT Sbjct: 214 TSPSAAAPTIQLPAEALDRPLPVVPAPT 241 >ref|YP_001353843.1| hypothetical protein mma_2153 [Janthinobacterium sp. Marseille] gb|ABR90848.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 236 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 86/176 (48%), Positives = 113/176 (64%), Gaps = 10/176 (5%) Query: 9 LGFTVAAVVALTGLSVLTCKAVHAQGPNTTAATQQPASATALTTPSKITK------KPDS 62 LG + AL+ +AV + P T A + PA+AT P I K K + Sbjct: 13 LGKITTTLFALSLAYTGATQAVPSSAP-TFAPSATPATAT---NPKPIAKAIPPTSKTTN 68 Query: 63 KPTWSELTPVQQHALAPLAGEWKKMEFSSKEKWLVIGNKFAAMSPAEQERMQNRMRDWVK 122 K W++LTP Q+ ALAPLA +W K++ KEKWL + N+F +M+P EQERMQ RMRDWVK Sbjct: 69 KSEWNKLTPAQKQALAPLAADWGKLDSFRKEKWLELANRFTSMTPPEQERMQERMRDWVK 128 Query: 123 LTPMQRRSVRESYTRAKKLDADQKSAQWKEYQQLSDEQKKKLSQAKLPKHVAALPP 178 LTP QRR RE+Y RAKKL+A+QK+ QW+EYQQLSDE+KK+L++ P+ PP Sbjct: 129 LTPDQRRLARENYNRAKKLNAEQKAKQWEEYQQLSDEKKKQLAETATPQKRIVNPP 184 >ref|YP_001099537.1| hypothetical protein HEAR1234 [Herminiimonas arsenicoxydans] emb|CAL61410.1| conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 231 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%) Query: 62 SKPTWSELTPVQQHALAPLAGEWKKMEFSSKEKWLVIGNKFAAMSPAEQERMQNRMRDWV 121 +K W++L+P QQ ALAPLAG+W +++ KEKWL + N+FA+M P EQ RMQ RMRDWV Sbjct: 73 AKSEWNKLSPAQQRALAPLAGDWSRLDSFRKEKWLELANRFASMPPEEQARMQERMRDWV 132 Query: 122 KLTPMQRRSVRESYTRAKKLDADQKSAQWKEYQQLSDEQKKKLSQAKLPKHVAALPPTP- 180 KL+P QRR RESY+R KKL+A QKS QW+EYQQLS+E+KK+L+ PK A PP Sbjct: 133 KLSPEQRRLARESYSRTKKLNAQQKSRQWEEYQQLSEEKKKQLAATAKPKKPLANPPRQY 192 Query: 181 AKAAPTIQLPPE 192 A P I+ PP+ Sbjct: 193 AGKDPVIKQPPK 204 >ref|YP_004751913.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK61090.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 234 Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/155 (48%), Positives = 106/155 (68%), Gaps = 7/155 (4%) Query: 52 TPSKITKKPD-SKPTWSELTPVQQHALAPLAGEWKKMEFSSKEKWLVIGNKFAAMSPAEQ 110 P K+TK + P W+EL+ VQQH L PLAG+W K++ ++++KWL I N++A+M+PAEQ Sbjct: 65 NPPKMTKVVGITAPNWNELSAVQQHVLEPLAGDWNKLKPATRKKWLEISNRYASMTPAEQ 124 Query: 111 ERMQNRMRDWVKLTPMQRRSVRESYTRAKKLDADQKSAQWKEYQQLSDEQKKKLSQAKLP 170 ER+Q RMR WV LTP QRR RE+Y RA KLD +Q++ +W++YQQLS++QKK+L++ P Sbjct: 125 ERLQARMRGWVTLTPEQRRIARENYARANKLDTEQRALRWQQYQQLSEQQKKELAEQATP 184 Query: 171 KH--VAALPPTPAK----AAPTIQLPPEALEQTLV 199 H V +PP AAP PP EQ ++ Sbjct: 185 SHKRVTTMPPAKFNKSKPAAPVSLTPPNGQEQAVM 219 >ref|ZP_07676569.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gb|EFP65141.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 279 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 4/150 (2%) Query: 14 AAVVALTGLSVLTCKAVHAQGPNTTAATQQPA----SATALTTPSKITKKPDSKPTWSEL 69 A +VAL G + L Q P +A P + L TP P P W+EL Sbjct: 22 AGIVALIGAAGLMAGLAVGQVPAASAPVATPGVTVGAPVGLPTPPATNPLPAVHPNWAEL 81 Query: 70 TPVQQHALAPLAGEWKKMEFSSKEKWLVIGNKFAAMSPAEQERMQNRMRDWVKLTPMQRR 129 T VQQ APLA EW M +++KWL I + +PA+Q+R+Q RM DWVKLTP QR Sbjct: 82 TIVQQRIFAPLAPEWNGMPELARKKWLQIAQAYPKYTPAQQQRLQTRMADWVKLTPEQRH 141 Query: 130 SVRESYTRAKKLDADQKSAQWKEYQQLSDE 159 RE++ K L +KS W+ YQQL++E Sbjct: 142 RARENFQTTKSLPVQKKSEAWQSYQQLTEE 171