BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0250.p         (177 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751912.1| putative transmembrane protein [Collimonas f...   245   2e-63
ref|YP_003775152.1| transmembrane protein [Herbaspirillum serope...   215   2e-54
ref|ZP_08273826.1| putative transmembrane protein [Oxalobacterac...   197   4e-49
emb|CAL61409.2| conserved hypothetical protein; putative RDD dom...   192   2e-47
ref|YP_001099536.1| hypothetical protein HEAR1233 [Herminiimonas...   192   2e-47

>ref|YP_004751912.1| putative transmembrane protein [Collimonas fungivorans Ter331]
 gb|AEK61089.1| putative transmembrane protein [Collimonas fungivorans Ter331]
          Length = 182

 Score =  245 bits (625), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 118/171 (69%), Positives = 142/171 (83%), Gaps = 3/171 (1%)

Query: 9   TATP---SALPTPSLRRRLCSMVYESMLLFGVVFISTWIFSTVLEQRHALYLRHALESWL 65
           +ATP   S   TPSL+RR  S++YESMLLFG++FIS WIFST+L+QRHALYLRHA ++WL
Sbjct: 4   SATPQLSSQQQTPSLKRRFGSIMYESMLLFGILFISGWIFSTLLQQRHALYLRHAQQAWL 63

Query: 66  FVILGLYFIWFWSHGGQTLAMKTWRIRLAGKDGAPVKAWRALLRFLLSWLWFLPGLALAW 125
           F++L LYF+W WSHGGQTLAMKTWRI+L  +DG+ VKA RA +RFLLSW WFLPGLALAW
Sbjct: 64  FIVLTLYFVWCWSHGGQTLAMKTWRIQLVNRDGSAVKAGRAAIRFLLSWCWFLPGLALAW 123

Query: 126 ALGAKGWMLIWIPAVNVVVWAALIYTDPQRQFLHDRLAGTRIVDLNPSKKK 176
           ALGA  WML+WIPA N ++WA  IY DPQRQFLHDR+AGTR+VD+    K+
Sbjct: 124 ALGAHTWMLVWIPAANFLLWALTIYLDPQRQFLHDRIAGTRLVDMAEIAKR 174


>ref|YP_003775152.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63244.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 168

 Score =  215 bits (547), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 106/157 (67%), Positives = 125/157 (79%)

Query: 15  LPTPSLRRRLCSMVYESMLLFGVVFISTWIFSTVLEQRHALYLRHALESWLFVILGLYFI 74
           L TPSLRRRL SM+YESMLLFGV+FIS W+FST+L+QRHALYLRH LE WLF++L LYFI
Sbjct: 4   LTTPSLRRRLSSMLYESMLLFGVLFISGWLFSTLLQQRHALYLRHGLEMWLFLVLALYFI 63

Query: 75  WFWSHGGQTLAMKTWRIRLAGKDGAPVKAWRALLRFLLSWLWFLPGLALAWALGAKGWML 134
           WFW+HGGQTLAMKTWR R+  + GA +  WRA  RFLL+WLW LPGLALA A+  + W L
Sbjct: 64  WFWTHGGQTLAMKTWRFRVVDQHGAALGLWRAAWRFLLAWLWVLPGLALAAAVHGQQWTL 123

Query: 135 IWIPAVNVVVWAALIYTDPQRQFLHDRLAGTRIVDLN 171
           + IPA N+V+WA     D   QFLHDRLAGTR+VD+ 
Sbjct: 124 VLIPAGNIVLWALTARLDKDGQFLHDRLAGTRLVDVT 160


>ref|ZP_08273826.1| putative transmembrane protein [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32690.1| putative transmembrane protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 150

 Score =  197 bits (502), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 118/150 (78%)

Query: 27  MVYESMLLFGVVFISTWIFSTVLEQRHALYLRHALESWLFVILGLYFIWFWSHGGQTLAM 86
           M+YE MLLFGV+FI+ W+F T+L+QRHALYLR  L+ WLF ++G YFIWFWSHGGQTLAM
Sbjct: 1   MLYEGMLLFGVLFIAGWLFGTLLQQRHALYLRGILQYWLFFVMGAYFIWFWSHGGQTLAM 60

Query: 87  KTWRIRLAGKDGAPVKAWRALLRFLLSWLWFLPGLALAWALGAKGWMLIWIPAVNVVVWA 146
           KTWR+RL  +DG+ V   +A  RFLLSWLW +PGL LAW   A+GW+L+ IPA NVV+WA
Sbjct: 61  KTWRVRLVAEDGSRVSVLQASARFLLSWLWVVPGLMLAWRFQAQGWLLVLIPAANVVIWA 120

Query: 147 ALIYTDPQRQFLHDRLAGTRIVDLNPSKKK 176
            L + DP R+F+HDRLA T++V +   KKK
Sbjct: 121 GLCWLDPSRRFVHDRLARTKLVGVPELKKK 150


>emb|CAL61409.2| conserved hypothetical protein; putative RDD domain; putative
           membrane protein [Herminiimonas arsenicoxydans]
          Length = 170

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 116/158 (73%)

Query: 17  TPSLRRRLCSMVYESMLLFGVVFISTWIFSTVLEQRHALYLRHALESWLFVILGLYFIWF 76
           TP+++RRL  M+YE +LLFGVV I+  +F+ + +QRHALYLRHA + WLF+++G YFIWF
Sbjct: 13  TPTIKRRLTVMIYEGVLLFGVVAIADLLFALIFQQRHALYLRHAAQYWLFIVIGAYFIWF 72

Query: 77  WSHGGQTLAMKTWRIRLAGKDGAPVKAWRALLRFLLSWLWFLPGLALAWALGAKGWMLIW 136
           W H GQTL MKTWR+RL   DG  +   RAL R+ L+WLWF+PGLA+AW LGAK W  + 
Sbjct: 73  WMHSGQTLPMKTWRMRLVTLDGRQLPFRRALARYFLAWLWFVPGLAIAWLLGAKEWTAVA 132

Query: 137 IPAVNVVVWAALIYTDPQRQFLHDRLAGTRIVDLNPSK 174
           I   N++ WA      P RQFLHDR+AGT+I+ LN +K
Sbjct: 133 IVMANILAWALTASLHPSRQFLHDRIAGTKIIQLNKTK 170


>ref|YP_001099536.1| hypothetical protein HEAR1233 [Herminiimonas arsenicoxydans]
          Length = 165

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 116/158 (73%)

Query: 17  TPSLRRRLCSMVYESMLLFGVVFISTWIFSTVLEQRHALYLRHALESWLFVILGLYFIWF 76
           TP+++RRL  M+YE +LLFGVV I+  +F+ + +QRHALYLRHA + WLF+++G YFIWF
Sbjct: 8   TPTIKRRLTVMIYEGVLLFGVVAIADLLFALIFQQRHALYLRHAAQYWLFIVIGAYFIWF 67

Query: 77  WSHGGQTLAMKTWRIRLAGKDGAPVKAWRALLRFLLSWLWFLPGLALAWALGAKGWMLIW 136
           W H GQTL MKTWR+RL   DG  +   RAL R+ L+WLWF+PGLA+AW LGAK W  + 
Sbjct: 68  WMHSGQTLPMKTWRMRLVTLDGRQLPFRRALARYFLAWLWFVPGLAIAWLLGAKEWTAVA 127

Query: 137 IPAVNVVVWAALIYTDPQRQFLHDRLAGTRIVDLNPSK 174
           I   N++ WA      P RQFLHDR+AGT+I+ LN +K
Sbjct: 128 IVMANILAWALTASLHPSRQFLHDRIAGTKIIQLNKTK 165