BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0233.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001100590.1| hypothetical protein HEAR2337 [Herminiimonas... 288 3e-76 ref|YP_003775806.1| periplasmic or secreted lipoprotein [Herbasp... 266 1e-69 ref|NP_715845.1| hypothetical protein SO_0204 [Shewanella oneide... 223 1e-56 ref|YP_982529.1| transport protein [Polaromonas naphthalenivoran... 213 2e-53 ref|YP_002947436.1| transport-associated [Variovorax paradoxus S... 204 6e-51 >ref|YP_001100590.1| hypothetical protein HEAR2337 [Herminiimonas arsenicoxydans] emb|CAL62468.1| putative transport associated protein [Herminiimonas arsenicoxydans] Length = 216 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 152/215 (70%), Positives = 173/215 (80%) Query: 1 MKTDFQIKQDVADELAWDAAVNDNEIGVEVRDGIVTLTGNLDSYAEKYAAEKAAQRVAGV 60 MKTD Q+KQDV DEL W++AV++ IGVEV +GIVTL+G L+SYAEKYAAEKA QRV GV Sbjct: 1 MKTDRQLKQDVIDELEWESAVDETGIGVEVHNGIVTLSGTLNSYAEKYAAEKAVQRVEGV 60 Query: 61 KGLAVEIDVVLPGSSCRTDADIVRTASHGLEWNALVPKDSVKIMVEDGWITLSGEVDHQY 120 KGLAVE+DV LP RTDAD+ R A+ LEWNALVPKD +KI VEDGWITL+G VD QY Sbjct: 61 KGLAVELDVALPDWVQRTDADVARAAAQALEWNALVPKDCIKIKVEDGWITLTGNVDFQY 120 Query: 121 QRMAAENALRSLLGVIGISNQIAVKHVARPADIKTHIEAALQRRAHSTVKAIEVAVNGDQ 180 QR+A+E AL++LLGV+GISNQIAV P DIK HIEAALQRRAH+ K IEV VNGDQ Sbjct: 121 QRIASERALQNLLGVVGISNQIAVTPSVTPRDIKNHIEAALQRRAHTETKGIEVIVNGDQ 180 Query: 181 ITLNGSVASLAEREEAFAAAARTPGVHKVVDKLSI 215 ITLNGSV+SLAER A AA RT GV KVVDKL + Sbjct: 181 ITLNGSVSSLAERRAALNAAMRTRGVAKVVDKLFV 215 >ref|YP_003775806.1| periplasmic or secreted lipoprotein [Herbaspirillum seropedicae SmR1] emb|CAM32657.1| Periplasmic or secreted lipoprotein [Herbaspirillum seropedicae] gb|ADJ63898.1| periplasmic or secreted lipoprotein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 128/213 (60%), Positives = 167/213 (78%) Query: 1 MKTDFQIKQDVADELAWDAAVNDNEIGVEVRDGIVTLTGNLDSYAEKYAAEKAAQRVAGV 60 MK+D Q++Q+V DELAWD AV+D IGVEV +GIVTL G+L SYAEKYAA++A +R+ GV Sbjct: 1 MKSDHQLRQEVMDELAWDPAVDDKRIGVEVSEGIVTLAGHLSSYAEKYAAQRAVERIGGV 60 Query: 61 KGLAVEIDVVLPGSSCRTDADIVRTASHGLEWNALVPKDSVKIMVEDGWITLSGEVDHQY 120 +G+AVE+DV LPGSS R D++I +A + LEWN ++PK+ ++I VEDGWITLSGEV+ Y Sbjct: 61 RGIAVELDVRLPGSSERLDSEIAASARNALEWNTVLPKEGIQIKVEDGWITLSGEVEFAY 120 Query: 121 QRMAAENALRSLLGVIGISNQIAVKHVARPADIKTHIEAALQRRAHSTVKAIEVAVNGDQ 180 QR+AAE +LR+L G+IGISNQ+ V+ A P DIKT IEAALQRRAH K++ V V+ Sbjct: 121 QRLAAEQSLRNLFGLIGISNQLKVEAKAAPKDIKTGIEAALQRRAHLQTKSLRVQVDNKT 180 Query: 181 ITLNGSVASLAEREEAFAAAARTPGVHKVVDKL 213 +TL+G V SLAER EA AA TPGV +V+D++ Sbjct: 181 VTLSGKVGSLAERHEACKAALHTPGVEQVIDEI 213 >ref|NP_715845.1| hypothetical protein SO_0204 [Shewanella oneidensis MR-1] gb|AAN53290.1|AE015470_3 hypothetical protein SO_0204 [Shewanella oneidensis MR-1] Length = 219 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 115/213 (53%), Positives = 151/213 (70%) Query: 1 MKTDFQIKQDVADELAWDAAVNDNEIGVEVRDGIVTLTGNLDSYAEKYAAEKAAQRVAGV 60 +KTD QI++DV +EL W+ +V + IGVEV+DGIVTL G++D+YAEK+ AE+AAQRV V Sbjct: 2 LKTDAQIQKDVLEELKWEPSVQASNIGVEVKDGIVTLAGHVDTYAEKWHAEQAAQRVCCV 61 Query: 61 KGLAVEIDVVLPGSSCRTDADIVRTASHGLEWNALVPKDSVKIMVEDGWITLSGEVDHQY 120 K LAVEIDV + G+ RTDADI R+ + LEWN +PKDSV++MVE GW+TLSG V Y Sbjct: 62 KALAVEIDVKMNGAIKRTDADIARSVQNILEWNVFIPKDSVRVMVESGWVTLSGHVTADY 121 Query: 121 QRMAAENALRSLLGVIGISNQIAVKHVARPADIKTHIEAALQRRAHSTVKAIEVAVNGDQ 180 QR A +++R + GV G+SNQI +K V A IKT IEA L+RRA + AI V ++ + Sbjct: 122 QRRTAASSIRYMSGVTGVSNQIVLKPVVTAAVIKTDIEATLKRRASAEADAIHVDIHNHE 181 Query: 181 ITLNGSVASLAEREEAFAAAARTPGVHKVVDKL 213 +TL+G SLAERE A +PGV KV D + Sbjct: 182 VTLSGKANSLAERELISRAVWDSPGVWKVTDNI 214 >ref|YP_982529.1| transport protein [Polaromonas naphthalenivorans CJ2] gb|ABM37608.1| transport-associated protein [Polaromonas naphthalenivorans CJ2] Length = 217 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 114/217 (52%), Positives = 148/217 (68%) Query: 1 MKTDFQIKQDVADELAWDAAVNDNEIGVEVRDGIVTLTGNLDSYAEKYAAEKAAQRVAGV 60 MKTD Q+K +V DELAWD A+N IGV V DG+VTLTG+L+S+AEK A E+A QRV GV Sbjct: 1 MKTDSQLKANVIDELAWDPAINATGIGVMVTDGVVTLTGHLNSFAEKEAVERAIQRVDGV 60 Query: 61 KGLAVEIDVVLPGSSCRTDADIVRTASHGLEWNALVPKDSVKIMVEDGWITLSGEVDHQY 120 +G+A+E+DV L R+D++I + A+ L N+LVP D +K++VE+GW+TLSGEVD Y Sbjct: 61 RGIALELDVKLSAEHKRSDSEIAQAAATSLRLNSLVPYDKIKVLVENGWVTLSGEVDWSY 120 Query: 121 QRMAAENALRSLLGVIGISNQIAVKHVARPADIKTHIEAALQRRAHSTVKAIEVAVNGDQ 180 Q + AE +R L GV GI N+IA+K A +I I AAL R+A + I V V G Sbjct: 121 QLVRAEQCIRPLAGVHGIYNRIAIKPRASGRNIGEQITAALTRQAMREARHISVEVEGGV 180 Query: 181 ITLNGSVASLAEREEAFAAAARTPGVHKVVDKLSIVY 217 +TL G+V SLAERE A AA GV +VVDKL + Y Sbjct: 181 VTLKGTVHSLAEREAAVGAAFSAQGVSRVVDKLKVGY 217 >ref|YP_002947436.1| transport-associated [Variovorax paradoxus S110] gb|ACS22170.1| transport-associated [Variovorax paradoxus S110] Length = 217 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 107/215 (49%), Positives = 143/215 (66%) Query: 1 MKTDFQIKQDVADELAWDAAVNDNEIGVEVRDGIVTLTGNLDSYAEKYAAEKAAQRVAGV 60 MK+D Q++ DV EL WD A+ ++GV V G+VTLTG+L S AEK A E+AAQRV+GV Sbjct: 1 MKSDTQLRADVQAELEWDPAITSTDVGVIVNHGVVTLTGHLGSCAEKLAVEQAAQRVSGV 60 Query: 61 KGLAVEIDVVLPGSSCRTDADIVRTASHGLEWNALVPKDSVKIMVEDGWITLSGEVDHQY 120 K LA+E V L RTDADI + A H LEWN VP+D+V+ MVEDGW+TL+GEV+ Y Sbjct: 61 KALAIETSVKLAAGFERTDADIAQAAGHALEWNVQVPRDAVRPMVEDGWVTLTGEVEWDY 120 Query: 121 QRMAAENALRSLLGVIGISNQIAVKHVARPADIKTHIEAALQRRAHSTVKAIEVAVNGDQ 180 QR AAE+ +R+LLGV GI+N + +K AD++ ++ AL R H + + V VNG Q Sbjct: 121 QRQAAESTVRNLLGVTGITNLVRIKLQRCSADVERQVQDALIRVFHDAPRQVAVDVNGSQ 180 Query: 181 ITLNGSVASLAEREEAFAAAARTPGVHKVVDKLSI 215 + L G V S AE + AA PGV VV++L++ Sbjct: 181 VVLRGKVRSWAELDAVRGAAWSAPGVVSVVNELAV 215