BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0230.p         (130 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004368246.1| SPW repeat protein [Marinithermus hydrotherm...    69   2e-10
ref|YP_004126146.1| spw repeat-containing protein [Alicycliphilu...    66   2e-09

>ref|YP_004368246.1| SPW repeat protein [Marinithermus hydrothermalis DSM 14884]
 gb|AEB12136.1| SPW repeat protein [Marinithermus hydrothermalis DSM 14884]
          Length = 109

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 1/108 (0%)

Query: 11  SRWQACVMMTVGIALLVSPWLMGYPQQPISR-NSVATGSAITVFALLAIVAPALWEEAVL 69
            RWQ    + +GI L++SPWL+GY   P +  N++  G+A+T+ ++LA+    LWEE   
Sbjct: 2   KRWQDWGSLVLGIWLVLSPWLLGYSTTPSAFWNALIVGAAVTILSILALSGGQLWEEWTD 61

Query: 70  LMLGCWSVASPWILGFEDQRGAALICVVAGGGVLISALWAMKNRDQVA 117
           L+L  W + SPWIL F     A    V+ G  + + ALW  +   + A
Sbjct: 62  LVLAVWLILSPWILNFTANTAAFWNAVIVGVLIGVLALWVTRQHPRPA 109


>ref|YP_004126146.1| spw repeat-containing protein [Alicycliphilus denitrificans BC]
 ref|YP_004389273.1| SPW repeat-containing protein [Alicycliphilus denitrificans K601]
 gb|ADU99258.1| SPW repeat-containing protein [Alicycliphilus denitrificans BC]
 gb|AEB85757.1| SPW repeat protein [Alicycliphilus denitrificans K601]
          Length = 124

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 2/106 (1%)

Query: 11  SRWQACVMMTVGIALLVSPWLMGYPQQPI-SRNSVATGSAITVFALLAIVAPALWEEAVL 69
             WQ  +   +G+ L +SPW+MG+  Q + + +SV  G A+   +L A+  P  WEE   
Sbjct: 8   KHWQDPLNALLGVWLALSPWVMGFESQMVPTASSVVAGLALIAVSLGAVFVPRAWEEWTQ 67

Query: 70  LMLGCWSVASPWILGFEDQRGAALICVVAGGGVLISALWAM-KNRD 114
             LG W +ASPW+LGF  Q     + V +G  VL  ALW +  ++D
Sbjct: 68  AALGVWMIASPWVLGFSGQMDVMRVAVASGIVVLALALWVLATDKD 113