BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0229.p         (145 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08276002.1| Universal stress protein [Oxalobacteraceae ba...   141   4e-32
ref|YP_003777268.1| universal stress protein [Herbaspirillum ser...   140   5e-32
ref|YP_001100591.1| universal stress family protein [Herminiimon...   139   1e-31
ref|YP_001099866.1| universal stress protein [Herminiimonas arse...   138   3e-31
ref|ZP_04577433.1| universal stress protein UspA [Oxalobacter fo...   131   3e-29

>ref|ZP_08276002.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30529.1| Universal stress protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 145

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 95/145 (65%)

Query: 1   MFKKILVPTDGSDLSNRAVRAAIEFAKDHGSAVVGLSVAQTHPYESFTLISRREDFSLLS 60
           MFK ILVPTDGS LS++A+ AAIEFA+  G+ +VGLSVA+ +PY   +  +   D +   
Sbjct: 1   MFKTILVPTDGSALSDKAIHAAIEFAQLTGARIVGLSVAEPYPYSPLSEGAITIDSTAYQ 60

Query: 61  ESLRQRARDYVHIIEDLAEKACIPCQVHTVDSPQPWKAIVDAAAEHACDCIFMASHGRGG 120
           E + + AR  V  I D A  A + C+ H  +S  P++ IV  A  H CD +FMASHGR G
Sbjct: 61  EKMLEIARSNVRQIADAASAANVTCETHVRESFSPYEEIVSVADLHGCDVVFMASHGRKG 120

Query: 121 LNRILLGNQTHKVLVHGNVPVIIFR 145
           LN++ +G++T KVL H  +PV++FR
Sbjct: 121 LNKLFVGSETQKVLAHSTLPVLVFR 145


>ref|YP_003777268.1| universal stress protein [Herbaspirillum seropedicae SmR1]
 emb|CAM32578.1| Universal stress protein [Herbaspirillum seropedicae]
 gb|ADJ65360.1| universal stress protein [Herbaspirillum seropedicae SmR1]
          Length = 145

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 97/145 (66%)

Query: 1   MFKKILVPTDGSDLSNRAVRAAIEFAKDHGSAVVGLSVAQTHPYESFTLISRREDFSLLS 60
           MFK ILVPTDGS+ S++A+  A+++AK+ G+ ++G++VA+ +P+      S   D +L  
Sbjct: 1   MFKTILVPTDGSERSDKAIATAVDYAKNSGARLIGITVAEPYPFSPLAESSMAIDPALYE 60

Query: 61  ESLRQRARDYVHIIEDLAEKACIPCQVHTVDSPQPWKAIVDAAAEHACDCIFMASHGRGG 120
           E+++  A+ ++  I D A  A +PCQ   V S  P + I+ AA  HACD IFMASHGR G
Sbjct: 61  ENVKTLAQQHIKKITDAATAAGVPCQTEIVMSFNPDEEIIKAAQLHACDAIFMASHGRSG 120

Query: 121 LNRILLGNQTHKVLVHGNVPVIIFR 145
           L+RI LG++T KVL H  +PV++ R
Sbjct: 121 LSRIFLGSKTQKVLTHSTIPVLVLR 145


>ref|YP_001100591.1| universal stress family protein [Herminiimonas arsenicoxydans]
 emb|CAL62469.1| putative universel stress protein UspA-like [Herminiimonas
           arsenicoxydans]
          Length = 140

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 98/145 (67%), Gaps = 5/145 (3%)

Query: 1   MFKKILVPTDGSDLSNRAVRAAIEFAKDHGSAVVGLSVAQTHPYESFTLISRREDFSLLS 60
           M K IL+ TDGSDLS +AV AAI+FA  +GS +VGLSVA+  P E F       D   + 
Sbjct: 1   MLKTILLATDGSDLSKKAVTAAIDFAASYGSKIVGLSVAEVFP-ELFL----DYDLRAIE 55

Query: 61  ESLRQRARDYVHIIEDLAEKACIPCQVHTVDSPQPWKAIVDAAAEHACDCIFMASHGRGG 120
           E +++RA    + +E+ A+KA + C+VHTV    P++ I+ AA +  CD IFMASHG+ G
Sbjct: 56  EDMQKRAVSDANFVEECAKKAGVACEVHTVTGVHPYQEIIKAANDFHCDAIFMASHGKKG 115

Query: 121 LNRILLGNQTHKVLVHGNVPVIIFR 145
           +++ILLG++T KVL H  +PV+++R
Sbjct: 116 IDKILLGSETQKVLAHSTIPVLVYR 140


>ref|YP_001099866.1| universal stress protein [Herminiimonas arsenicoxydans]
 emb|CAL61739.1| putative universal stress protein UspA [Herminiimonas
           arsenicoxydans]
          Length = 143

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 95/145 (65%), Gaps = 2/145 (1%)

Query: 1   MFKKILVPTDGSDLSNRAVRAAIEFAKDHGSAVVGLSVAQTHPYESFTLISRREDFSLLS 60
           MFKKIL+ TDGS+LS++AV+AA++FAK+HGS +VGLSVA  +PY  F +          +
Sbjct: 1   MFKKILLATDGSELSDKAVQAALQFAKEHGSKIVGLSVATIYPY--FPVYGMEATSGEFA 58

Query: 61  ESLRQRARDYVHIIEDLAEKACIPCQVHTVDSPQPWKAIVDAAAEHACDCIFMASHGRGG 120
           +++ + A  YVH I   A    +  +VH V+       I+ AA ++ CD IFMASHGR G
Sbjct: 59  QAISKEAEKYVHKIATHAASLGVDAEVHVVEGTSASDEIIKAADKYHCDAIFMASHGRKG 118

Query: 121 LNRILLGNQTHKVLVHGNVPVIIFR 145
           L++ LLG++  KVLVH  +PV IF+
Sbjct: 119 LDKFLLGSEAQKVLVHSKLPVTIFK 143


>ref|ZP_04577433.1| universal stress protein UspA [Oxalobacter formigenes HOxBLS]
 gb|EEO28395.1| universal stress protein UspA [Oxalobacter formigenes HOxBLS]
          Length = 145

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 4/147 (2%)

Query: 1   MFKKILVPTDGSDLSNRAVRAAIEFAKDH-GSAVVGLSVAQTHPYESF-TLISRREDFSL 58
           M++KILVPTDGS LS +A+ AAIEFAK H G  +VG SVA+   +    +L    E   +
Sbjct: 1   MYRKILVPTDGSVLSEKAIAAAIEFAKSHAGCEIVGFSVAEPLSFNQIESLTKSGESDYM 60

Query: 59  LSESLRQRARDYVHIIEDLAEKACIPCQVHTVDSPQPWKAIVDAAAEHACDCIFMASHGR 118
           + E L  ++R  V  I +LA+ A +PC+     S +P + IV AA+E+ CDCIFMAS+GR
Sbjct: 61  VREQLSAQSR--VQRIAELAKAAGVPCETVVTQSTKPHEEIVRAASEYHCDCIFMASNGR 118

Query: 119 GGLNRILLGNQTHKVLVHGNVPVIIFR 145
            GLN++ +G++T KVL    VPV+++R
Sbjct: 119 KGLNKLFIGSETQKVLATAQVPVLVYR 145