BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0222.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775249.1| multidrug ABC transporter ATPase [Herbaspiri... 427 e-118 ref|YP_003981676.1| ABC transporter [Achromobacter xylosoxidans ... 425 e-117 ref|YP_934413.1| ABC transporter permease and ATP-binding protei... 423 e-116 ref|ZP_06688917.1| ABC superfamily ATP binding cassette transpor... 420 e-115 ref|ZP_08401484.1| ABC transporter permease and ATP-binding prot... 416 e-114 >ref|YP_003775249.1| multidrug ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63341.1| ABC-type multidrug transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 923 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/260 (78%), Positives = 229/260 (88%) Query: 18 TGVDPLSRAQFWDLIGKIRGERAGMSVIVATAYMEEADRFDWLVAMDDGKILATGTPREL 77 TGVDPLSRAQFWDLI IR +RAGMSVIVATAYMEEADRFDWLVAMD+G++LATGTP +L Sbjct: 174 TGVDPLSRAQFWDLIAHIRQQRAGMSVIVATAYMEEADRFDWLVAMDEGRVLATGTPVQL 233 Query: 78 HERVGAASLEAAFIAMLPEAKRRNHRAVVVTPLQPSDNEETAIEAKGLTMRFGDFVAVAH 137 H+R G ASLE AFIA+LPE KRR H+ V VTPL + + AIEAKGLTMRFGDF+AV H Sbjct: 234 HQRTGTASLEEAFIALLPEEKRRGHQTVQVTPLDDTIDSGVAIEAKGLTMRFGDFLAVDH 293 Query: 138 VDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLFGRKVDGSDITTRQRVGYM 197 VDF+IRRGEIFGFLGSNGCGKSTTMKMLTGL+PASEG+AWLFGR++D D+ TR RVGYM Sbjct: 294 VDFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGREIDPRDMATRARVGYM 353 Query: 198 SQAFSLYGELTVRQNLVLHARLFQVPESAIAARVDEMAQRFDLRQVLDKLPEGLPLGVRQ 257 SQAFSLYGEL+VRQNLVLHARL++VP IAAR DEMA+RF L V+D LPE LPLG+RQ Sbjct: 354 SQAFSLYGELSVRQNLVLHARLYRVPAEQIAARTDEMARRFGLLDVMDSLPESLPLGIRQ 413 Query: 258 RLSLAVAMVHRPELLILDEP 277 RLSLAVAMVH+PELLILDEP Sbjct: 414 RLSLAVAMVHKPELLILDEP 433 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 8/159 (5%) Query: 125 LTMRFGDFVAVAHVDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLFGRKVD 184 + +R+G VA+ V I G + G +G +G GKS+ + ++ G +G+ + G D Sbjct: 16 VALRYGKTVALDAVSLDIPAGCMVGLIGPDGVGKSSLLSLVAGARALQQGELAVLGG--D 73 Query: 185 GSDITTRQ----RVGYMSQAF--SLYGELTVRQNLVLHARLFQVPESAIAARVDEMAQRF 238 RQ R+ YM Q +LY L+V +NL RLF S R+DE+ Sbjct: 74 MRQQRHRQQACPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGQDASERRRRIDELTTST 133 Query: 239 DLRQVLDKLPEGLPLGVRQRLSLAVAMVHRPELLILDEP 277 L + L + L G++Q+L L +++H P+LLILDEP Sbjct: 134 GLDKFLARPAGKLSGGMKQKLGLCCSLIHDPDLLILDEP 172 >ref|YP_003981676.1| ABC transporter [Achromobacter xylosoxidans A8] gb|ADP18961.1| ABC transporter family protein 87 [Achromobacter xylosoxidans A8] Length = 914 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/260 (78%), Positives = 230/260 (88%) Query: 18 TGVDPLSRAQFWDLIGKIRGERAGMSVIVATAYMEEADRFDWLVAMDDGKILATGTPREL 77 TGVDPL+RAQFWDLI +IR ER+GMSVIVATAYM+EA RFDWL+AMD+G++LATGTP EL Sbjct: 173 TGVDPLARAQFWDLINQIRRERSGMSVIVATAYMDEAQRFDWLIAMDEGRVLATGTPAEL 232 Query: 78 HERVGAASLEAAFIAMLPEAKRRNHRAVVVTPLQPSDNEETAIEAKGLTMRFGDFVAVAH 137 +R GA SLEAAFIA+LPE KRR H+ V + PL D+ E AIEA+ LTMRFGDFVAV H Sbjct: 233 QQRTGADSLEAAFIALLPEEKRRGHKPVEIMPLAIDDDAEIAIEARDLTMRFGDFVAVDH 292 Query: 138 VDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLFGRKVDGSDITTRQRVGYM 197 V+F+IR+GEIFGFLGSNGCGKSTTMKMLTGL+PASEG+AWLFG +VD +I TR+RVGYM Sbjct: 293 VNFRIRKGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGAEVDPRNIDTRRRVGYM 352 Query: 198 SQAFSLYGELTVRQNLVLHARLFQVPESAIAARVDEMAQRFDLRQVLDKLPEGLPLGVRQ 257 SQAFSLYGELTV+QNLVLHARLF VPES I ARVDEMAQRFDL + LD LPE LP+GVRQ Sbjct: 353 SQAFSLYGELTVKQNLVLHARLFHVPESEIPARVDEMAQRFDLGEALDTLPENLPMGVRQ 412 Query: 258 RLSLAVAMVHRPELLILDEP 277 RLSLAVAMVH+PELLILDEP Sbjct: 413 RLSLAVAMVHKPELLILDEP 432 Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 16/175 (9%) Query: 114 DNEETA--IEAKGLTMRFGDFVAVAHVDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPA 171 D+ +TA + G+++R+G VA+ + I G + G +G +G GKS+ + ++ G Sbjct: 2 DSPDTAPVVTLSGVSLRYGKTVALDGITLDIPAGRMVGLIGPDGVGKSSLLALIAGSRAV 61 Query: 172 SEGKAWLFGRKVDGSDITTRQ-------RVGYMSQAF--SLYGELTVRQNLVLHARLFQV 222 EG+ V D+ +R+ R+ YM Q +LY L+V +NL RLF Sbjct: 62 QEGRV-----DVLNGDMASRRHRDAVCPRIAYMPQGLGKNLYPALSVEENLQFFGRLFGH 116 Query: 223 PESAIAARVDEMAQRFDLRQVLDKLPEGLPLGVRQRLSLAVAMVHRPELLILDEP 277 E+ R+D + + + L + L G++Q+L L A++H P+LLILDEP Sbjct: 117 DEAERRRRIDSLTRSTGMSAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEP 171 >ref|YP_934413.1| ABC transporter permease and ATP-binding protein [Azoarcus sp. BH72] emb|CAL95526.1| ABC transporter permease and ATP-binding protein [Azoarcus sp. BH72] Length = 922 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 204/260 (78%), Positives = 230/260 (88%) Query: 18 TGVDPLSRAQFWDLIGKIRGERAGMSVIVATAYMEEADRFDWLVAMDDGKILATGTPREL 77 TGVDPL+R+QFW LI +IR R GMSVIVATAYM+EA+RFDWLVAM+ G++LATG+PREL Sbjct: 177 TGVDPLARSQFWTLIARIRRGRPGMSVIVATAYMDEAERFDWLVAMNAGRVLATGSPREL 236 Query: 78 HERVGAASLEAAFIAMLPEAKRRNHRAVVVTPLQPSDNEETAIEAKGLTMRFGDFVAVAH 137 HER G A+LEAAFIA+LPE+ RR HRAVVV PL + +E AIEA+GLTMRFGDF AV H Sbjct: 237 HERTGTATLEAAFIALLPESARRGHRAVVVPPLAEGERDEIAIEARGLTMRFGDFTAVDH 296 Query: 138 VDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLFGRKVDGSDITTRQRVGYM 197 V F+IRRGEIFGFLGSNGCGKSTTMKMLTGL+PASEG+AWLFGRKVD +DI TR+RVGYM Sbjct: 297 VSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGRKVDAADIDTRRRVGYM 356 Query: 198 SQAFSLYGELTVRQNLVLHARLFQVPESAIAARVDEMAQRFDLRQVLDKLPEGLPLGVRQ 257 SQ+FSLY ELTV QNLVLHARLF VPE+AIAARV EM+ RFDL VLD LPE LPLG+RQ Sbjct: 357 SQSFSLYSELTVAQNLVLHARLFDVPEAAIAARVAEMSARFDLGAVLDSLPEQLPLGLRQ 416 Query: 258 RLSLAVAMVHRPELLILDEP 277 RLSLAVAMVH+P+LLILDEP Sbjct: 417 RLSLAVAMVHKPDLLILDEP 436 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 8/171 (4%) Query: 113 SDNEETAIEAKGLTMRFGDFVAVAHVDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPAS 172 SD + G+ +R+G +A+ +D +I G + G +G +G GKS+ M ++ G Sbjct: 7 SDRGAPVVRLAGVGLRYGSTLALDGIDLEIPAGCMVGLIGPDGVGKSSLMSLVAGARALQ 66 Query: 173 EGKAWLFGRKVDGSDITTRQRV----GYMSQAF--SLYGELTVRQNLVLHARLFQVPESA 226 G + G + +D R RV YM Q +LY L+V +NL RLF Sbjct: 67 AGAVEVLGGSM--ADAGHRARVCPHIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHDAGE 124 Query: 227 IAARVDEMAQRFDLRQVLDKLPEGLPLGVRQRLSLAVAMVHRPELLILDEP 277 R+D++ + L LD+ L G++Q+L L A++H P LLILDEP Sbjct: 125 RRRRIDDLTRATGLDPFLDRPAGKLSGGMKQKLGLCCALIHDPALLILDEP 175 >ref|ZP_06688917.1| ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] gb|EFF74160.1| ABC superfamily ATP binding cassette transporter [Achromobacter piechaudii ATCC 43553] Length = 923 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 203/260 (78%), Positives = 229/260 (88%) Query: 18 TGVDPLSRAQFWDLIGKIRGERAGMSVIVATAYMEEADRFDWLVAMDDGKILATGTPREL 77 TGVDPL+RAQFWDLI IR ER+GMSVIVATAYM+EA RFDWL+AMD+G++LATGTP EL Sbjct: 178 TGVDPLARAQFWDLINDIRRERSGMSVIVATAYMDEAQRFDWLIAMDEGRVLATGTPAEL 237 Query: 78 HERVGAASLEAAFIAMLPEAKRRNHRAVVVTPLQPSDNEETAIEAKGLTMRFGDFVAVAH 137 +R GA +LE+AFIA+LP KRR H+ V +TPL D+ AIEA+ LTMRFGDFVAV H Sbjct: 238 QQRTGADTLESAFIALLPPEKRRGHQPVHITPLALDDDAPIAIEARDLTMRFGDFVAVDH 297 Query: 138 VDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLFGRKVDGSDITTRQRVGYM 197 V+F+IRRGEIFGFLGSNGCGKSTTMKMLTGL+PASEG+AWLFG +VD +I TR+RVGYM Sbjct: 298 VNFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGVEVDPRNIDTRRRVGYM 357 Query: 198 SQAFSLYGELTVRQNLVLHARLFQVPESAIAARVDEMAQRFDLRQVLDKLPEGLPLGVRQ 257 SQAFSLYGELTVRQNLVLHARLF VPE+ IAARVDEMA RFDL VLD+LPE LP+GVRQ Sbjct: 358 SQAFSLYGELTVRQNLVLHARLFHVPEADIAARVDEMASRFDLGDVLDELPENLPMGVRQ 417 Query: 258 RLSLAVAMVHRPELLILDEP 277 RLSLAVAMVH+PELLILDEP Sbjct: 418 RLSLAVAMVHKPELLILDEP 437 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 120 IEAKGLTMRFGDFVAVAHVDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLF 179 ++ +T+R+G VA+ + I G + G +G +G GKS+ + ++ G +G + Sbjct: 15 VKLSDVTLRYGKTVALNGITLDIPAGRMVGLIGPDGVGKSSLLALIAGSRAVQQGSVDV- 73 Query: 180 GRKVDGSDITTRQR------VGYMSQAF--SLYGELTVRQNLVLHARLFQVPESAIAARV 231 +DG + R R + YM Q +LY L+V +NL RLF + R+ Sbjct: 74 ---LDGDMGSKRHRDAVCPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHSAAERRRRI 130 Query: 232 DEMAQRFDLRQVLDKLPEGLPLGVRQRLSLAVAMVHRPELLILDEP 277 D + + L L + L G++Q+L L A++H P+LLILDEP Sbjct: 131 DTLTRSTGLAPFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEP 176 >ref|ZP_08401484.1| ABC transporter permease and ATP-binding protein [Rubrivivax benzoatilyticus JA2] gb|EGJ09817.1| ABC transporter permease and ATP-binding protein [Rubrivivax benzoatilyticus JA2] Length = 513 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/260 (77%), Positives = 224/260 (86%) Query: 18 TGVDPLSRAQFWDLIGKIRGERAGMSVIVATAYMEEADRFDWLVAMDDGKILATGTPREL 77 TGVDPLSRAQFWDLI +R +R MSV+VATAYMEEA+RFDWLVAMD G++LATGTP EL Sbjct: 169 TGVDPLSRAQFWDLIDSLRADRPQMSVVVATAYMEEAERFDWLVAMDGGRVLATGTPAEL 228 Query: 78 HERVGAASLEAAFIAMLPEAKRRNHRAVVVTPLQPSDNEETAIEAKGLTMRFGDFVAVAH 137 R G A+LE AFIA+LPE +RR HRAV V PL +E AIEA+GLTMRFGDF AV H Sbjct: 229 RARTGCAALEQAFIALLPEERRRGHRAVTVPPLAEGGEDEIAIEAQGLTMRFGDFTAVDH 288 Query: 138 VDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKAWLFGRKVDGSDITTRQRVGYM 197 VDF+IRRGEIFGFLGSNGCGKSTTMK+LTGL+PASEG+AWLFG +VD +DI TR+RVGYM Sbjct: 289 VDFRIRRGEIFGFLGSNGCGKSTTMKILTGLLPASEGRAWLFGHEVDAADIGTRRRVGYM 348 Query: 198 SQAFSLYGELTVRQNLVLHARLFQVPESAIAARVDEMAQRFDLRQVLDKLPEGLPLGVRQ 257 SQAFSLYGELTVRQNLVLHARLFQ+PE IAARVDEM +RFDL+ D LPE LPLG+RQ Sbjct: 349 SQAFSLYGELTVRQNLVLHARLFQMPEETIAARVDEMLERFDLQAEADTLPETLPLGMRQ 408 Query: 258 RLSLAVAMVHRPELLILDEP 277 RLSLAVAMVH PELLILDEP Sbjct: 409 RLSLAVAMVHHPELLILDEP 428 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 8/167 (4%) Query: 117 ETAIEAKGLTMRFGDFVAVAHVDFKIRRGEIFGFLGSNGCGKSTTMKMLTGLIPASEGKA 176 E + A+GLT+ +G A+A V + G G +G +G GKS+ + ++ G +G+ Sbjct: 3 EPVVRAEGLTLAYGAVQALADVSLALPAGCRVGLIGPDGVGKSSLLSLVAGARALQQGRL 62 Query: 177 WLFGRKVDGSDITTRQ----RVGYMSQAF--SLYGELTVRQNLVLHARLFQVPESAIAAR 230 + G D +D R R+ YM Q +LY L+V +NL RLF R Sbjct: 63 QVLGG--DMADAAHRSAACPRIAYMPQGLGRNLYPTLSVEENLQFFGRLFGHGADERRRR 120 Query: 231 VDEMAQRFDLRQVLDKLPEGLPLGVRQRLSLAVAMVHRPELLILDEP 277 +D + L L++ L G++Q+L+L A++H P+LLILDEP Sbjct: 121 IDSLTAATGLAPFLERPAGKLSGGMKQKLALCCALIHDPDLLILDEP 167