BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0220.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001100833.1| putative ABC transport system membrane prote...   197   4e-49
ref|YP_003158681.1| ABC-2 type transporter [Desulfomicrobium bac...   193   8e-48
ref|ZP_04764548.1| ABC-2 type transporter [Acidovorax delafieldi...   184   3e-45
ref|ZP_02925856.1| ABC-2 [Verrucomicrobium spinosum DSM 4136]         179   1e-43
ref|YP_003775250.1| multidrug ABC transporter permease [Herbaspi...   178   2e-43

>ref|YP_001100833.1| putative ABC transport system membrane protein [Herminiimonas
           arsenicoxydans]
 emb|CAL62712.1| ABC-2 type transporter, permease [Herminiimonas arsenicoxydans]
          Length = 376

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 94/135 (69%), Positives = 106/135 (78%)

Query: 9   AVANITRLGVKELWSLARDPAMLVLIAYTFTVSIYVAATAMPDSLHNAAIAIVDEDGSPL 68
           ++ NI RLG+KELWSL RDP MLVLI YTFTV+IYVAATAMP++LHNA IAIVDED SPL
Sbjct: 5   SIVNIYRLGIKELWSLVRDPTMLVLIVYTFTVAIYVAATAMPENLHNAVIAIVDEDDSPL 64

Query: 69  SARIAASFYPPYFKTPDMISLSRMDVGMDNGDYTFVLDIPPGFQRDVLAGRSPGGFAGRT 128
           SARI +SFYPP+FKTP +ISL+ MD+GMDNGDYTFVLDIP  FQRDVLAGR+P       
Sbjct: 65  SARIVSSFYPPHFKTPRLISLAEMDIGMDNGDYTFVLDIPANFQRDVLAGRAPAAQLNVD 124

Query: 129 AERGRHAHEPGIYRQ 143
           A R   A     Y Q
Sbjct: 125 ATRMSQAFTGSGYVQ 139


>ref|YP_003158681.1| ABC-2 type transporter [Desulfomicrobium baculatum DSM 4028]
 gb|ACU90265.1| ABC-2 type transporter [Desulfomicrobium baculatum DSM 4028]
          Length = 374

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 91/113 (80%), Positives = 100/113 (88%)

Query: 10  VANITRLGVKELWSLARDPAMLVLIAYTFTVSIYVAATAMPDSLHNAAIAIVDEDGSPLS 69
           + N+ RLGVKELWSL RDP MLVLIAYTFT +IYVAATAMP+SLHNA IAIVDEDGSPLS
Sbjct: 4   IENVLRLGVKELWSLVRDPIMLVLIAYTFTFAIYVAATAMPESLHNAPIAIVDEDGSPLS 63

Query: 70  ARIAASFYPPYFKTPDMISLSRMDVGMDNGDYTFVLDIPPGFQRDVLAGRSPG 122
           ARI +SFYPP FKTP MI+L+++D GMD GDYTFVLDIPPGFQRDVLAGR P 
Sbjct: 64  ARIVSSFYPPRFKTPAMIALAQIDSGMDRGDYTFVLDIPPGFQRDVLAGRMPA 116


>ref|ZP_04764548.1| ABC-2 type transporter [Acidovorax delafieldii 2AN]
 gb|EER58647.1| ABC-2 type transporter [Acidovorax delafieldii 2AN]
          Length = 376

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/135 (68%), Positives = 102/135 (75%)

Query: 9   AVANITRLGVKELWSLARDPAMLVLIAYTFTVSIYVAATAMPDSLHNAAIAIVDEDGSPL 68
           ++AN+ RLG+KELWSL RDP MLVLIAYTFTVSIYVAATAMP+ LH AAIAIVDED SPL
Sbjct: 5   SIANVWRLGIKELWSLVRDPMMLVLIAYTFTVSIYVAATAMPEGLHKAAIAIVDEDDSPL 64

Query: 69  SARIAASFYPPYFKTPDMISLSRMDVGMDNGDYTFVLDIPPGFQRDVLAGRSPGGFAGRT 128
           SARI  SFYPP F TP +I+L+ MD GMDNG YTFVLDIPP FQR+VLAG +P       
Sbjct: 65  SARIVGSFYPPQFITPRLITLAEMDAGMDNGHYTFVLDIPPNFQREVLAGLTPSIQLNVD 124

Query: 129 AERGRHAHEPGIYRQ 143
           A R   A     Y Q
Sbjct: 125 ATRMSQAFTGSGYVQ 139


>ref|ZP_02925856.1| ABC-2 [Verrucomicrobium spinosum DSM 4136]
          Length = 374

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 102/136 (75%)

Query: 8   RAVANITRLGVKELWSLARDPAMLVLIAYTFTVSIYVAATAMPDSLHNAAIAIVDEDGSP 67
           R + NI RLGVKE WSLARDP ML+LIAY FTV IYVAATA+PD+LH+A IAIVDEDGSP
Sbjct: 2   RHMGNIFRLGVKEFWSLARDPIMLMLIAYAFTVMIYVAATALPDTLHHAPIAIVDEDGSP 61

Query: 68  LSARIAASFYPPYFKTPDMISLSRMDVGMDNGDYTFVLDIPPGFQRDVLAGRSPGGFAGR 127
           LSARI ASFYPP FK+P +I+L +MD G+D+G YTFV+DIPP FQRDVL G +P      
Sbjct: 62  LSARIVASFYPPRFKSPALITLDQMDAGLDSGVYTFVVDIPPNFQRDVLGGHTPKIQVNV 121

Query: 128 TAERGRHAHEPGIYRQ 143
            A R   A     Y Q
Sbjct: 122 DATRMSQAFTGTAYVQ 137


>ref|YP_003775250.1| multidrug ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63342.1| ABC-type multidrug transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 375

 Score =  178 bits (452), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/138 (65%), Positives = 104/138 (75%), Gaps = 3/138 (2%)

Query: 6   SWRAVANITRLGVKELWSLARDPAMLVLIAYTFTVSIYVAATAMPDSLHNAAIAIVDEDG 65
           SW   ANI RLG+KELWSL RDPAMLVLIAYTF++SIYVAATAMP+SLH+AAIAIVD D 
Sbjct: 4   SW---ANIYRLGIKELWSLLRDPAMLVLIAYTFSLSIYVAATAMPESLHHAAIAIVDNDS 60

Query: 66  SPLSARIAASFYPPYFKTPDMISLSRMDVGMDNGDYTFVLDIPPGFQRDVLAGRSPGGFA 125
           SPLSARIAASFYPP+FK   +++  + D G+D+GDYTFVLDIP  FQRDVLA R+P    
Sbjct: 61  SPLSARIAASFYPPHFKVARLVTARQADAGLDDGDYTFVLDIPADFQRDVLAARAPAVQL 120

Query: 126 GRTAERGRHAHEPGIYRQ 143
              A R   A     Y Q
Sbjct: 121 NVDATRMSQAFTGNSYIQ 138