BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0210.p (538 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775137.1| proline/glycine betaine ABC transporter ATPa... 679 0.0 ref|YP_552354.1| glycine betaine/L-proline ABC transporter ATPas... 615 e-174 ref|YP_004752115.1| L-proline glycine betaine ABC transport ATP-... 614 e-173 ref|YP_367241.1| ABC glycine betaine/L-proline transporter, ATPa... 605 e-171 ref|YP_004350195.1| ABC glycine betaine/L-proline transporter, A... 601 e-170 >ref|YP_003775137.1| proline/glycine betaine ABC transporter ATPase [Herbaspirillum seropedicae SmR1] emb|CAM32581.1| ABC-type proline/glycine betaine transport system, ATP [Herbaspirillum seropedicae] gb|ADJ63229.1| ABC-type proline/glycine betaine transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 377 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/379 (86%), Positives = 351/379 (92%), Gaps = 2/379 (0%) Query: 160 MIELEQLSKTYTQKDGTPVKAVDSVSLKVAEGEICVFLGPSGCGKTTTLKMINRLIAPTS 219 MI L+QLSKTYTQKDGT VKAVD+VSLKVAEGEICVFLGPSGCGKTTTLKMINRLI PTS Sbjct: 1 MIALDQLSKTYTQKDGTQVKAVDAVSLKVAEGEICVFLGPSGCGKTTTLKMINRLINPTS 60 Query: 220 GRVLLNGEDTTGIDEVSLRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRCRERAT 279 GRVLLNG+DT+GIDEV LRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRC+ERAT Sbjct: 61 GRVLLNGQDTSGIDEVELRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRCQERAT 120 Query: 280 ELMAMVALDPAKFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ 339 ELMAMVALDP KFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ Sbjct: 121 ELMAMVALDPKKFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ 180 Query: 340 NEFFQMQRQLKKTVIMVSHDIDEAIKLGDQVAIFRAGKLVQFDHPDTLLARPKDDFVSAF 399 NEFFQMQRQL KTVIMVSHDIDEAIKLGD+VA+FRAGKLVQFD+PDTLLARPKDDFVSAF Sbjct: 181 NEFFQMQRQLNKTVIMVSHDIDEAIKLGDKVAVFRAGKLVQFDNPDTLLARPKDDFVSAF 240 Query: 400 VGQDHTLKRLLLVRAGDAATTPSTARPGLPLQDAMALMDDQDARYLTITDNDNRALGYVS 459 VGQDHTLKRLLLVRAG+AATTP TA P + A+ALMDDQD+RYLTI D DNRALGY++ Sbjct: 241 VGQDHTLKRLLLVRAGEAATTPPTAHPDVSCDQALALMDDQDSRYLTIIDADNRALGYLT 300 Query: 460 RRDIRSTGTAGVSGDKVKPFNLNATPDENLRVVLSKMYKHSASWMPVIDAEGKYIGEVTQ 519 RRD+R G+ GV+ DKV+PF +NA PDENLRVVLSKMYKHS SWMPVI +G Y+GEVTQ Sbjct: 301 RRDVR--GSTGVAEDKVRPFTMNADPDENLRVVLSKMYKHSTSWMPVIANDGSYVGEVTQ 358 Query: 520 DSIADYLSSGKSRGQKIAA 538 DSIA YLSSGKSRG +AA Sbjct: 359 DSIASYLSSGKSRGMAMAA 377 >ref|YP_552354.1| glycine betaine/L-proline ABC transporter ATPase subunit [Burkholderia xenovorans LB400] gb|ABE33004.1| ABC glycine betaine/L-proline transporter, ATPase subunit [Burkholderia xenovorans LB400] Length = 400 Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust. Identities = 294/375 (78%), Positives = 334/375 (89%), Gaps = 2/375 (0%) Query: 160 MIELEQLSKTYTQKDGTPVKAVDSVSLKVAEGEICVFLGPSGCGKTTTLKMINRLIAPTS 219 MIEL++L+KT+TQKDG VKAVDSVSL V EGEICVFLGPSGCGKTTTLKMINRLIAPTS Sbjct: 1 MIELDKLTKTFTQKDGQQVKAVDSVSLTVGEGEICVFLGPSGCGKTTTLKMINRLIAPTS 60 Query: 220 GRVLLNGEDTTGIDEVSLRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRCRERAT 279 GRVL+NGEDT+G++EV LRRHIGYVIQQIGLFPNMTIEENIT+VPRLLGWD+KRCRERAT Sbjct: 61 GRVLINGEDTSGLNEVELRRHIGYVIQQIGLFPNMTIEENITVVPRLLGWDRKRCRERAT 120 Query: 280 ELMAMVALDPAKFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ 339 ELM+MVAL+P ++LKRYPRELSGGQQQRIGVIRALAAD PVLLMDEPFGAVDPINRESIQ Sbjct: 121 ELMSMVALEPKQYLKRYPRELSGGQQQRIGVIRALAADPPVLLMDEPFGAVDPINRESIQ 180 Query: 340 NEFFQMQRQLKKTVIMVSHDIDEAIKLGDQVAIFRAGKLVQFDHPDTLLARPKDDFVSAF 399 NEFFQMQRQL KTVIMVSHDIDEAIKLGD+VA+FR G+LVQ+DHPDTLLA P+D+FV AF Sbjct: 181 NEFFQMQRQLNKTVIMVSHDIDEAIKLGDRVAVFRRGRLVQYDHPDTLLAHPRDEFVGAF 240 Query: 400 VGQDHTLKRLLLVRAGDAATTPSTARPGLPLQDAMALMDDQDARYLTITDNDNRALGYVS 459 VGQD TLKRLLLV+AGDAAT P TAR +P+ A +MDD D+RYLTI D + +ALGYV+ Sbjct: 241 VGQDSTLKRLLLVKAGDAATQPGTARAAMPVARAFQMMDDSDSRYLTIVDENQQALGYVT 300 Query: 460 RRDIRSTGTAGVSGDKVKPFNLNATPDENLRVVLSKMYKHSASWMPVIDAEGKYIGEVTQ 519 RR R TG G+ GD + F + DENLR+VLSKMY+ ++SWMPV+D +G+Y+GEVTQ Sbjct: 301 RRAAR-TG-EGLCGDHLSTFKATVSADENLRIVLSKMYQFNSSWMPVLDGDGRYVGEVTQ 358 Query: 520 DSIADYLSSGKSRGQ 534 DSIADYLSSG+SR Q Sbjct: 359 DSIADYLSSGRSRRQ 373 >ref|YP_004752115.1| L-proline glycine betaine ABC transport ATP-binding protein [Collimonas fungivorans Ter331] gb|AEK61292.1| L-proline Glycine Betaine ABC transport ATP-binding protein [Collimonas fungivorans Ter331] Length = 372 Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust. Identities = 297/374 (79%), Positives = 326/374 (87%), Gaps = 2/374 (0%) Query: 160 MIELEQLSKTYTQKDGTPVKAVDSVSLKVAEGEICVFLGPSGCGKTTTLKMINRLIAPTS 219 MI+L+QLSK +TQ DG VKAVD V+L VAEGEICVFLGPSGCGK+TTLKMINRLIAPTS Sbjct: 1 MIQLDQLSKVFTQNDGNQVKAVDQVNLTVAEGEICVFLGPSGCGKSTTLKMINRLIAPTS 60 Query: 220 GRVLLNGEDTTGIDEVSLRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRCRERAT 279 GRVLL+GEDTTG+DEVSLRR IGYVIQQ+GLFPNMTIEENIT+VPRLLGWDKKRC ERAT Sbjct: 61 GRVLLDGEDTTGLDEVSLRRKIGYVIQQVGLFPNMTIEENITVVPRLLGWDKKRCHERAT 120 Query: 280 ELMAMVALDPAKFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ 339 ELMAMVALDP +FL RYPRE+SGGQQQRIGVIRALAAD PVLLMDEPFGAVDPINRESIQ Sbjct: 121 ELMAMVALDPKRFLNRYPREMSGGQQQRIGVIRALAADPPVLLMDEPFGAVDPINRESIQ 180 Query: 340 NEFFQMQRQLKKTVIMVSHDIDEAIKLGDQVAIFRAGKLVQFDHPDTLLARPKDDFVSAF 399 NEFFQMQRQL KTVIMVSHDIDEAIKLGD++AIFRAGKLVQ D PDTLLARPKD+FV +F Sbjct: 181 NEFFQMQRQLNKTVIMVSHDIDEAIKLGDKIAIFRAGKLVQVDRPDTLLARPKDEFVGSF 240 Query: 400 VGQDHTLKRLLLVRAGDAATTPSTARPGLPLQDAMALMDDQDARYLTITDNDNRALGYVS 459 VGQD TLKRLLLVRAGDAA T +T + A +MDD D RY+T+T+ N ALGYV+ Sbjct: 241 VGQDATLKRLLLVRAGDAAATSATVLEDASMAAAYGVMDDNDYRYVTVTNAANHALGYVA 300 Query: 460 RRDIRSTGTAGVSGDKVKPFNLNATPDENLRVVLSKMYKHSASWMPVIDAEGKYIGEVTQ 519 RRD R G G DK+KPF ++A PDENLRVVLSKMYKHS SWMPVID + Y+GEVTQ Sbjct: 301 RRDAR--GGQGACIDKMKPFTVSAAPDENLRVVLSKMYKHSTSWMPVIDQDNSYLGEVTQ 358 Query: 520 DSIADYLSSGKSRG 533 DSIADYLSSG++R Sbjct: 359 DSIADYLSSGRTRA 372 >ref|YP_367241.1| ABC glycine betaine/L-proline transporter, ATPase subunit [Burkholderia sp. 383] gb|ABB06597.1| ABC glycine betaine/L-proline transporter, ATPase subunit [Burkholderia sp. 383] Length = 391 Score = 605 bits (1559), Expect = e-171, Method: Compositional matrix adjust. Identities = 291/375 (77%), Positives = 331/375 (88%), Gaps = 2/375 (0%) Query: 160 MIELEQLSKTYTQKDGTPVKAVDSVSLKVAEGEICVFLGPSGCGKTTTLKMINRLIAPTS 219 MIEL++L+KT+++KDG V+AVD+VSL VAEGEICVFLGPSGCGKTTTLKMINRLIAPTS Sbjct: 1 MIELDKLTKTFSRKDGQAVRAVDAVSLSVAEGEICVFLGPSGCGKTTTLKMINRLIAPTS 60 Query: 220 GRVLLNGEDTTGIDEVSLRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRCRERAT 279 GRVL+NGEDT +DEV LRRHIGYVIQQIGLFPNMTIEENIT+VPRLLGWDKKRC ERA Sbjct: 61 GRVLINGEDTAQLDEVDLRRHIGYVIQQIGLFPNMTIEENITVVPRLLGWDKKRCAERAR 120 Query: 280 ELMAMVALDPAKFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ 339 +LMAMVALDP +LKRYPRELSGGQQQRIGVIRALAAD PVLLMDEPFGAVDPINRESIQ Sbjct: 121 DLMAMVALDPKLYLKRYPRELSGGQQQRIGVIRALAADPPVLLMDEPFGAVDPINRESIQ 180 Query: 340 NEFFQMQRQLKKTVIMVSHDIDEAIKLGDQVAIFRAGKLVQFDHPDTLLARPKDDFVSAF 399 NEFFQMQRQL KTVIMVSHDIDEAIKLGD++A+FR G+LVQ+DHPDTLLARP+D+FV+ F Sbjct: 181 NEFFQMQRQLNKTVIMVSHDIDEAIKLGDRIAVFRRGQLVQYDHPDTLLARPRDEFVAQF 240 Query: 400 VGQDHTLKRLLLVRAGDAATTPSTARPGLPLQDAMALMDDQDARYLTITDNDNRALGYVS 459 VGQD TLKRLLLV+AGDAAT P TAR PL A+A+MD+ D RYLT+ D+ RALGYV+ Sbjct: 241 VGQDSTLKRLLLVKAGDAATQPETARVDTPLAHALAVMDETDCRYLTVLDDAGRALGYVT 300 Query: 460 RRDIRSTGTAGVSGDKVKPFNLNATPDENLRVVLSKMYKHSASWMPVIDAEGKYIGEVTQ 519 RR RS G GV G++V PF D+NLR+VLSKMY++SASWMPV+D +G ++GE+TQ Sbjct: 301 RRAARSDG--GVCGERVTPFPAGVAADDNLRIVLSKMYQYSASWMPVLDPDGAWLGEITQ 358 Query: 520 DSIADYLSSGKSRGQ 534 DSIA YLSSG+SR Q Sbjct: 359 DSIAAYLSSGRSRRQ 373 >ref|YP_004350195.1| ABC glycine betaine/L-proline transporter, ATPase subunit [Burkholderia gladioli BSR3] gb|AEA64683.1| ABC glycine betaine/L-proline transporter, ATPase subunit [Burkholderia gladioli BSR3] Length = 388 Score = 601 bits (1550), Expect = e-170, Method: Compositional matrix adjust. Identities = 286/375 (76%), Positives = 327/375 (87%), Gaps = 2/375 (0%) Query: 160 MIELEQLSKTYTQKDGTPVKAVDSVSLKVAEGEICVFLGPSGCGKTTTLKMINRLIAPTS 219 MIEL+QL+KT++QKDG PV+AVDSVSL V EGEICVFLGPSGCGKTTTLKMINRLI PTS Sbjct: 1 MIELDQLTKTFSQKDGQPVRAVDSVSLSVPEGEICVFLGPSGCGKTTTLKMINRLITPTS 60 Query: 220 GRVLLNGEDTTGIDEVSLRRHIGYVIQQIGLFPNMTIEENITIVPRLLGWDKKRCRERAT 279 GRVL++GEDT +DEV LRR IGYVIQQIGLFPNMTIEENIT+VPRLLGWDKKRC+ERAT Sbjct: 61 GRVLIDGEDTNALDEVDLRRRIGYVIQQIGLFPNMTIEENITVVPRLLGWDKKRCKERAT 120 Query: 280 ELMAMVALDPAKFLKRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINRESIQ 339 ELM+MVALDP +LKRYPRELSGGQQQRIGV+RALAAD PVLLMDEPFGAVDPINRESIQ Sbjct: 121 ELMSMVALDPKLYLKRYPRELSGGQQQRIGVVRALAADPPVLLMDEPFGAVDPINRESIQ 180 Query: 340 NEFFQMQRQLKKTVIMVSHDIDEAIKLGDQVAIFRAGKLVQFDHPDTLLARPKDDFVSAF 399 NEFFQMQRQLKKTVIMVSHDIDEAIKLGD+VA+FR GKLVQ+DHPDTLLA P+D+FV F Sbjct: 181 NEFFQMQRQLKKTVIMVSHDIDEAIKLGDRVAVFRRGKLVQYDHPDTLLAHPRDEFVGQF 240 Query: 400 VGQDHTLKRLLLVRAGDAATTPSTARPGLPLQDAMALMDDQDARYLTITDNDNRALGYVS 459 VGQD TLKRLLLV+AGDAAT P TAR L +A +MD+ D+RYLT+ D RALG+V+ Sbjct: 241 VGQDSTLKRLLLVKAGDAATQPPTARADTSLAEAFTVMDENDSRYLTVVDEARRALGFVA 300 Query: 460 RRDIRSTGTAGVSGDKVKPFNLNATPDENLRVVLSKMYKHSASWMPVIDAEGKYIGEVTQ 519 RR R G G G+++ F + ++NLR+VLSKMY++ +SWMPV+DA+G Y+GE+TQ Sbjct: 301 RRAAR--GADGSCGERLSEFPATVSTEDNLRIVLSKMYQYRSSWMPVLDADGAYVGEITQ 358 Query: 520 DSIADYLSSGKSRGQ 534 DSIADYLSSG+SR Q Sbjct: 359 DSIADYLSSGRSRQQ 373