BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0206.p (464 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775132.1| major facilitator superfamily permease [Herb... 699 0.0 ref|YP_004751978.1| major facilitator superfamily (MFS) multidru... 669 0.0 ref|YP_001888047.1| major facilitator superfamily protein [Burkh... 610 e-172 ref|YP_003910291.1| major facilitator superfamily protein [Burkh... 609 e-172 ref|ZP_06839778.1| major facilitator superfamily MFS_1 [Burkhold... 607 e-171 >ref|YP_003775132.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63224.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 441 Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/439 (75%), Positives = 395/439 (89%) Query: 20 MDVTVIATSLPALARDLGQDPITLKLALTSYVVSLGVFIPISGWIADKVGARTIFRSAMI 79 MD TV+ATSLPALARDL QDPITLKLA+T+YV +LGVFIPISGW+ADK+GAR +F +AMI Sbjct: 1 MDATVLATSLPALARDLHQDPITLKLAMTAYVAALGVFIPISGWMADKLGARKVFSAAMI 60 Query: 80 TFMTGSILCALSDSLLTFVAARFLQGIGGAMMVPVGRIIIVRSVSKAELVKAISYLTLPS 139 FMTGSILCA+S SL+TFVAARFLQGIGGAMMVPVGR+II RSV K+ELVKA+SYLTLP+ Sbjct: 61 VFMTGSILCAVSGSLVTFVAARFLQGIGGAMMVPVGRVIIARSVDKSELVKAVSYLTLPA 120 Query: 140 LMGPVIGPPLGGFITTYFHWRWIFLINIPICILGLYLAGRYIQNFREEDPAPLDVKGFLL 199 L+GPV+GP LGGFITTYFHWRW+FLINIP C LGLYLA R+IQNF+E++PAPLDVKGF+L Sbjct: 121 LLGPVVGPLLGGFITTYFHWRWVFLINIPFCFLGLYLARRFIQNFKEDNPAPLDVKGFVL 180 Query: 200 TACGGGVAMLGFSLIGNHLVPQAWPIVMCVAGSVALFFYFRHAMRSEYPLLDLRLLKIPT 259 T+ G + MLG SL G+HLV A P+ MC G++AL Y+RH+ + E+PLLD RLL+IPT Sbjct: 181 TSVGAAMIMLGLSLFGSHLVDGATPVAMCSIGAIALVMYYRHSTQIEFPLLDFRLLRIPT 240 Query: 260 LRASVLGGSLFRVGLGAVPFLLPLALQEGLGLNPFEAGTITCASAFGAMFMKALAAMVLR 319 L ASV+GGSLFR+GLGAVPFLLPLALQEGLG+ F+AG+ITCASAFG++F++ LA VLR Sbjct: 241 LHASVVGGSLFRIGLGAVPFLLPLALQEGLGMTAFQAGSITCASAFGSLFIRLLAGRVLR 300 Query: 320 RYGFRTVLMVNAVFAGMAIASYGIFSSHTPYYVMLLVVLMGGFFPSLQFTCLNSIAYADI 379 RYGFRTVLMVNAVFAG+A+A+YGIFS HTPY +++ +VLMGG FP+LQFTCLNSIAYADI Sbjct: 301 RYGFRTVLMVNAVFAGIALAAYGIFSIHTPYLLIVSIVLMGGVFPALQFTCLNSIAYADI 360 Query: 380 SNRDAGRATSLASVVQQLSLGMGVTIAGLVLQISNYLQGHATIVEADFWPAFLVVGLFSV 439 +RDAGR TSLASV+QQLSLG+GVT+AG+VLQ+SN+LQGHATIVEADFWPAFLV+GLFSV Sbjct: 361 DSRDAGRVTSLASVIQQLSLGLGVTVAGIVLQLSNHLQGHATIVEADFWPAFLVIGLFSV 420 Query: 440 ASVPVTARLPKNAGMELTR 458 ASVP++ +LP NAG+EL+R Sbjct: 421 ASVPISGKLPHNAGLELSR 439 >ref|YP_004751978.1| major facilitator superfamily (MFS) multidrug efflux pump [Collimonas fungivorans Ter331] gb|AEK61155.1| major facilitator superfamily (MFS) multidrug efflux pump [Collimonas fungivorans Ter331] Length = 470 Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/457 (70%), Positives = 385/457 (84%) Query: 1 VSPSLIVPLIVGCALFMENMDVTVIATSLPALARDLGQDPITLKLALTSYVVSLGVFIPI 60 V +L++PLIV CALFMENMD TVIATSLP LARDLGQDP+TLKLALTSYVV LGVFIPI Sbjct: 9 VPRTLLIPLIVACALFMENMDATVIATSLPVLARDLGQDPLTLKLALTSYVVGLGVFIPI 68 Query: 61 SGWIADKVGARTIFRSAMITFMTGSILCALSDSLLTFVAARFLQGIGGAMMVPVGRIIIV 120 SGW+AD+ GART+FR+A++ F++GS++CA S SL FVAARFLQGIGGAMMVPVGRI+I Sbjct: 69 SGWVADRFGARTVFRAAILVFLSGSLMCAASSSLAAFVAARFLQGIGGAMMVPVGRIVIF 128 Query: 121 RSVSKAELVKAISYLTLPSLMGPVIGPPLGGFITTYFHWRWIFLINIPICILGLYLAGRY 180 RSV + +LVKAISYLT+PS +GPVIGPPLGGFITTYFHWRWIFLIN+PI ILG+YLA RY Sbjct: 129 RSVPRTDLVKAISYLTIPSQLGPVIGPPLGGFITTYFHWRWIFLINVPISILGMYLASRY 188 Query: 181 IQNFREEDPAPLDVKGFLLTACGGGVAMLGFSLIGNHLVPQAWPIVMCVAGSVALFFYFR 240 I+N+R +D PLD+KGF+L+A G + MLG SLI L+ W MCV G + L+ Y Sbjct: 189 IENYRSDDLQPLDMKGFVLSAIGSTLLMLGLSLIDGELLAPEWAFAMCVLGGLTLYVYLL 248 Query: 241 HAMRSEYPLLDLRLLKIPTLRASVLGGSLFRVGLGAVPFLLPLALQEGLGLNPFEAGTIT 300 HA R +PLLDLRLL+IPT RASV+GGSLFR+GLGAVPFLLPLALQ G G+N F AGTIT Sbjct: 249 HARREPFPLLDLRLLRIPTFRASVIGGSLFRIGLGAVPFLLPLALQVGFGMNAFHAGTIT 308 Query: 301 CASAFGAMFMKALAAMVLRRYGFRTVLMVNAVFAGMAIASYGIFSSHTPYYVMLLVVLMG 360 CASAFGA+FMKA+ VLRRYGFR+VL+ NAV AG+A+ASYG+F+ TPY VM+ VVL+G Sbjct: 309 CASAFGAIFMKAIGTSVLRRYGFRSVLIWNAVLAGLALASYGLFTPTTPYLVMMAVVLLG 368 Query: 361 GFFPSLQFTCLNSIAYADISNRDAGRATSLASVVQQLSLGMGVTIAGLVLQISNYLQGHA 420 GFFPS+QFTCLN++AYAD+ + D RATSLASVVQQ+SLG+GVTI GL + +S+ LQGH+ Sbjct: 369 GFFPSMQFTCLNTMAYADLDSADVSRATSLASVVQQISLGLGVTIGGLAVHLSSRLQGHS 428 Query: 421 TIVEADFWPAFLVVGLFSVASVPVTARLPKNAGMELT 457 TIV ADFWPAF+V+GLFS+AS+PVT LP NAG LT Sbjct: 429 TIVAADFWPAFIVIGLFSLASIPVTRHLPLNAGSALT 465 >ref|YP_001888047.1| major facilitator superfamily protein [Burkholderia phytofirmans PsJN] gb|ACD18677.1| major facilitator superfamily MFS_1 [Burkholderia phytofirmans PsJN] Length = 467 Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust. Identities = 301/455 (66%), Positives = 371/455 (81%) Query: 4 SLIVPLIVGCALFMENMDVTVIATSLPALARDLGQDPITLKLALTSYVVSLGVFIPISGW 63 + IVPLIV CA+FMEN+D TVI TSLP LARDLGQDPITLKLA+T+YV+ LGVFIPI GW Sbjct: 7 TFIVPLIVACAMFMENVDGTVIVTSLPVLARDLGQDPITLKLAVTAYVIGLGVFIPICGW 66 Query: 64 IADKVGARTIFRSAMITFMTGSILCALSDSLLTFVAARFLQGIGGAMMVPVGRIIIVRSV 123 +AD+ G+RT+FR+A+ FM GS++CA S SL TFV ARF+QGIGGAMMVPVGRIII RSV Sbjct: 67 VADRFGSRTVFRAAIGVFMAGSLMCAASTSLGTFVVARFVQGIGGAMMVPVGRIIIFRSV 126 Query: 124 SKAELVKAISYLTLPSLMGPVIGPPLGGFITTYFHWRWIFLINIPICILGLYLAGRYIQN 183 K++ ++A++YLT+P+L+GPV+GPPLGGFITTY HWR IF INIPI +LG++LA ++I N Sbjct: 127 PKSDFIRAVNYLTVPALLGPVVGPPLGGFITTYLHWRLIFFINIPIGLLGIWLANKHIAN 186 Query: 184 FREEDPAPLDVKGFLLTACGGGVAMLGFSLIGNHLVPQAWPIVMCVAGSVALFFYFRHAM 243 RE P LD GF L+A G + MLG SL+G LV + MCV G V L Y +A Sbjct: 187 VREAHPGRLDWTGFFLSASGASLFMLGLSLVGGELVSNTVSVGMCVIGVVLLTLYALYAS 246 Query: 244 RSEYPLLDLRLLKIPTLRASVLGGSLFRVGLGAVPFLLPLALQEGLGLNPFEAGTITCAS 303 R E P+LDLRLL+IP+ ASV+GGSLFR+GLGAVPFLLPLALQEGLG+ F++G+ITCAS Sbjct: 247 RVELPVLDLRLLRIPSFHASVVGGSLFRIGLGAVPFLLPLALQEGLGMTAFKSGSITCAS 306 Query: 304 AFGAMFMKALAAMVLRRYGFRTVLMVNAVFAGMAIASYGIFSSHTPYYVMLLVVLMGGFF 363 AFG++FMKA A+ +L R+GFRTVLM NA AG+AIA YG+F TP++++ VVL GGFF Sbjct: 307 AFGSIFMKAAASRILERFGFRTVLMFNAGCAGLAIAVYGLFFPGTPHWLIWCVVLFGGFF 366 Query: 364 PSLQFTCLNSIAYADISNRDAGRATSLASVVQQLSLGMGVTIAGLVLQISNYLQGHATIV 423 PSLQFT LN++AYADI +RD GRATS+ASV+QQ+SLG+GVTIAG+VLQIS+ +QGH+ IV Sbjct: 367 PSLQFTSLNTLAYADIPSRDVGRATSVASVIQQISLGLGVTIAGIVLQISHNVQGHSAIV 426 Query: 424 EADFWPAFLVVGLFSVASVPVTARLPKNAGMELTR 458 +DFWPAFLVVGLFS S+P+TARLP AG E+ R Sbjct: 427 FSDFWPAFLVVGLFSFMSIPITARLPHGAGDEIAR 461 >ref|YP_003910291.1| major facilitator superfamily protein [Burkholderia sp. CCGE1003] gb|ADN61000.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1003] Length = 467 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 302/457 (66%), Positives = 370/457 (80%) Query: 4 SLIVPLIVGCALFMENMDVTVIATSLPALARDLGQDPITLKLALTSYVVSLGVFIPISGW 63 + IVPLIV CA+FMEN+D TVI TSLP LARDLGQDPITLKLA+T+YV+ LGVFIPI GW Sbjct: 7 AFIVPLIVACAMFMENVDGTVIVTSLPVLARDLGQDPITLKLAVTAYVIGLGVFIPICGW 66 Query: 64 IADKVGARTIFRSAMITFMTGSILCALSDSLLTFVAARFLQGIGGAMMVPVGRIIIVRSV 123 +AD+ G+RT+FR+A+ FM GS++CA S SL FV ARF+QGIGGAMMVPVGRIII RSV Sbjct: 67 VADRFGSRTVFRTAIGIFMAGSLMCAASTSLGMFVVARFVQGIGGAMMVPVGRIIIFRSV 126 Query: 124 SKAELVKAISYLTLPSLMGPVIGPPLGGFITTYFHWRWIFLINIPICILGLYLAGRYIQN 183 K++ ++A++YLT+P+L+GPV+GPPLGGFITTY HWR IF +NIPI +LG++LA ++I N Sbjct: 127 PKSDFIRAVNYLTVPALLGPVVGPPLGGFITTYLHWRLIFFVNIPIGLLGIWLANKHIAN 186 Query: 184 FREEDPAPLDVKGFLLTACGGGVAMLGFSLIGNHLVPQAWPIVMCVAGSVALFFYFRHAM 243 RE P PLD GFLL+A G + MLG SL+G LVP A MC G V L Y +A Sbjct: 187 VREAHPGPLDWVGFLLSASGASLFMLGLSLVGGELVPNAVSFGMCAVGVVLLVIYVLYAN 246 Query: 244 RSEYPLLDLRLLKIPTLRASVLGGSLFRVGLGAVPFLLPLALQEGLGLNPFEAGTITCAS 303 R + P+LDLRLL+IP+ ASV GGSLFR+GLGAVPFLLPLALQEGLG+ F +G+ITCAS Sbjct: 247 RVDMPVLDLRLLRIPSFHASVAGGSLFRIGLGAVPFLLPLALQEGLGMTAFVSGSITCAS 306 Query: 304 AFGAMFMKALAAMVLRRYGFRTVLMVNAVFAGMAIASYGIFSSHTPYYVMLLVVLMGGFF 363 AFG++FMKA A+ +L R+GFRTVLM NA AG+AIA YG+F TP++++ VVL GGFF Sbjct: 307 AFGSIFMKAAASRILERFGFRTVLMFNAGCAGVAIAIYGLFFPGTPHWLIWCVVLFGGFF 366 Query: 364 PSLQFTCLNSIAYADISNRDAGRATSLASVVQQLSLGMGVTIAGLVLQISNYLQGHATIV 423 PSLQFT LN++AYADI +RD GRATS+ASV+QQ+SLG+GVTIAG+VLQIS+ LQGH IV Sbjct: 367 PSLQFTSLNTLAYADIPSRDVGRATSVASVIQQISLGLGVTIAGIVLQISHNLQGHTRIV 426 Query: 424 EADFWPAFLVVGLFSVASVPVTARLPKNAGMELTRSH 460 +DFWPAF+VVGLFS S+PVTARLP +AG E+ R Sbjct: 427 FSDFWPAFVVVGLFSFLSIPVTARLPHDAGDEIARGR 463 >ref|ZP_06839778.1| major facilitator superfamily MFS_1 [Burkholderia sp. Ch1-1] gb|EFG72608.1| major facilitator superfamily MFS_1 [Burkholderia sp. Ch1-1] Length = 467 Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust. Identities = 302/461 (65%), Positives = 372/461 (80%), Gaps = 1/461 (0%) Query: 4 SLIVPLIVGCALFMENMDVTVIATSLPALARDLGQDPITLKLALTSYVVSLGVFIPISGW 63 + IVPLIV CA+FMEN+D TVI TSLP LARDLGQDPIT KLA+T+YV+ LGVFIPI GW Sbjct: 7 TFIVPLIVACAMFMENVDGTVIVTSLPVLARDLGQDPITFKLAVTAYVIGLGVFIPICGW 66 Query: 64 IADKVGARTIFRSAMITFMTGSILCALSDSLLTFVAARFLQGIGGAMMVPVGRIIIVRSV 123 +AD+ G+RT+FR+A+ FM GS++CA S SL TFV ARF+QGIGGAMMVPVGRIII RSV Sbjct: 67 VADRFGSRTVFRTAIGVFMAGSLMCAASTSLGTFVVARFVQGIGGAMMVPVGRIIIFRSV 126 Query: 124 SKAELVKAISYLTLPSLMGPVIGPPLGGFITTYFHWRWIFLINIPICILGLYLAGRYIQN 183 K++ ++A++YLT+P+L+GPV+GPPLGGFITTY HWR IF +NIPI +LG++LA ++I N Sbjct: 127 PKSDFIRAVNYLTVPALLGPVVGPPLGGFITTYLHWRLIFFVNIPIGLLGIWLANKHIAN 186 Query: 184 FREEDPAPLDVKGFLLTACGGGVAMLGFSLIGNHLVPQAWPIVMCVAGSVALFFYFRHAM 243 RE P LD GF L+A G + MLG SL+G LV + MCVAG V L Y +A Sbjct: 187 VREAHPGRLDWTGFALSASGASLFMLGLSLVGGELVSNTVSVGMCVAGVVLLTLYVLYAN 246 Query: 244 RSEYPLLDLRLLKIPTLRASVLGGSLFRVGLGAVPFLLPLALQEGLGLNPFEAGTITCAS 303 R E P+LDLRLL+IP+ ASV+GGSLFR+GLGAVPFLLPLALQEGLG+ F++G ITCAS Sbjct: 247 RVELPVLDLRLLRIPSFHASVVGGSLFRIGLGAVPFLLPLALQEGLGMTAFKSGAITCAS 306 Query: 304 AFGAMFMKALAAMVLRRYGFRTVLMVNAVFAGMAIASYGIFSSHTPYYVMLLVVLMGGFF 363 AFG++FMKA A+ +L R+GFRTVLM NA AG+AIA YG+F TP++++ VVL GG F Sbjct: 307 AFGSIFMKAAASRILERFGFRTVLMFNAGCAGLAIAVYGLFFPGTPHWLIWCVVLFGGVF 366 Query: 364 PSLQFTCLNSIAYADISNRDAGRATSLASVVQQLSLGMGVTIAGLVLQISNYLQGHATIV 423 PSLQFT LN++AYADI +RD GRATS+ASV+QQ+SLG+GVTIAG+VLQIS+ +QGH+ IV Sbjct: 367 PSLQFTSLNTLAYADIPSRDVGRATSVASVIQQISLGLGVTIAGIVLQISHNVQGHSAIV 426 Query: 424 EADFWPAFLVVGLFSVASVPVTARLPKNAGMELTRSHSSGK 464 +DFWPAFLVVGLFS S+PVTARLP AG E+ R S G+ Sbjct: 427 FSDFWPAFLVVGLFSFMSIPVTARLPHGAGDEIARG-SRGR 466