BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0202.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_747192.1| hypothetical protein PP_5091 [Pseudomonas putid...   225   1e-57
ref|ZP_08141552.1| TM2 domain-containing protein [Pseudomonas sp...   224   4e-57
ref|YP_004704343.1| TM2 domain-containing protein [Pseudomonas p...   224   5e-57
ref|YP_001270268.1| TM2 domain-containing protein [Pseudomonas p...   223   8e-57
gb|ADR62433.1| Hypothetical protein, conserved [Pseudomonas puti...   223   8e-57

>ref|NP_747192.1| hypothetical protein PP_5091 [Pseudomonas putida KT2440]
 gb|AAN70656.1|AE016710_1 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 139

 Score =  225 bits (574), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 104/134 (77%), Positives = 120/134 (89%)

Query: 13  SGIPVHDTHSKTIGYLLWIFGFTGAHRFYYGKPLTGTIWFFTLGLLGIGWIIDLFLIPAM 72
            G+P HDTHSKTIGYLLWIFGFTG+HRFYYGKP+TGTIWFFTLGLLGIGW+IDLFLIP+M
Sbjct: 6   QGVPFHDTHSKTIGYLLWIFGFTGSHRFYYGKPITGTIWFFTLGLLGIGWLIDLFLIPSM 65

Query: 73  DREADQRFSGGAINYSVAWLLLTFLGFFGVHRMYMGKWVSGIIYLCTGGLFLIGVLYDFW 132
           DREAD RF  G I+Y++AW+LLTFLG FG+HR+Y GKW++ IIY  TGGLFL+GVLYDFW
Sbjct: 66  DREADLRFQSGRIDYNIAWILLTFLGVFGLHRLYQGKWITAIIYFFTGGLFLVGVLYDFW 125

Query: 133 TLNTQISERNHASG 146
           TLN+Q+SERN   G
Sbjct: 126 TLNSQVSERNAGRG 139


>ref|ZP_08141552.1| TM2 domain-containing protein [Pseudomonas sp. TJI-51]
 gb|EGB97161.1| TM2 domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 139

 Score =  224 bits (570), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/134 (77%), Positives = 118/134 (88%)

Query: 13  SGIPVHDTHSKTIGYLLWIFGFTGAHRFYYGKPLTGTIWFFTLGLLGIGWIIDLFLIPAM 72
            G P HDTHSKTIGYLLWIFGFTG+HRFYYGKP+TGT+WFFT GLLGIGW+IDLFLIPAM
Sbjct: 6   QGTPYHDTHSKTIGYLLWIFGFTGSHRFYYGKPITGTLWFFTFGLLGIGWLIDLFLIPAM 65

Query: 73  DREADQRFSGGAINYSVAWLLLTFLGFFGVHRMYMGKWVSGIIYLCTGGLFLIGVLYDFW 132
           DREAD RF  G I+Y++AW+LLTFLG FG+HR+Y GKWV+ IIY  TGGLFL+GVLYDFW
Sbjct: 66  DREADLRFQSGRIDYNIAWVLLTFLGVFGLHRLYQGKWVTAIIYFLTGGLFLVGVLYDFW 125

Query: 133 TLNTQISERNHASG 146
           TLN+Q+SERN   G
Sbjct: 126 TLNSQVSERNAGRG 139


>ref|YP_004704343.1| TM2 domain-containing protein [Pseudomonas putida S16]
 gb|AEJ15463.1| TM2 domain-containing protein [Pseudomonas putida S16]
          Length = 139

 Score =  224 bits (570), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 104/134 (77%), Positives = 119/134 (88%)

Query: 13  SGIPVHDTHSKTIGYLLWIFGFTGAHRFYYGKPLTGTIWFFTLGLLGIGWIIDLFLIPAM 72
            G P HDTHSKTIGYLLWIFGFTG+HRFYYGKP+TGTIWFFTLGLLGIGW+IDLFLIP+M
Sbjct: 6   QGAPFHDTHSKTIGYLLWIFGFTGSHRFYYGKPVTGTIWFFTLGLLGIGWLIDLFLIPSM 65

Query: 73  DREADQRFSGGAINYSVAWLLLTFLGFFGVHRMYMGKWVSGIIYLCTGGLFLIGVLYDFW 132
           DREAD RF  G I+Y++AW+LLTFLG FG+HR+Y GKW++ IIY  TGGLFL+GVLYDFW
Sbjct: 66  DREADLRFQSGRIDYNIAWILLTFLGVFGLHRLYQGKWITAIIYFFTGGLFLVGVLYDFW 125

Query: 133 TLNTQISERNHASG 146
           TLN+Q+SERN   G
Sbjct: 126 TLNSQVSERNAGRG 139


>ref|YP_001270268.1| TM2 domain-containing protein [Pseudomonas putida F1]
 gb|ABQ81084.1| TM2 domain containing protein+B7201 [Pseudomonas putida F1]
          Length = 139

 Score =  223 bits (568), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 102/134 (76%), Positives = 119/134 (88%)

Query: 13  SGIPVHDTHSKTIGYLLWIFGFTGAHRFYYGKPLTGTIWFFTLGLLGIGWIIDLFLIPAM 72
            G+P HDTHSKTIGYLLWIFGFTG+HRFYYG+P+TGTIWFFT GLLGIGW+IDLFLIP+M
Sbjct: 6   QGVPFHDTHSKTIGYLLWIFGFTGSHRFYYGRPITGTIWFFTFGLLGIGWLIDLFLIPSM 65

Query: 73  DREADQRFSGGAINYSVAWLLLTFLGFFGVHRMYMGKWVSGIIYLCTGGLFLIGVLYDFW 132
           DREAD RF  G I+Y++AW+LLTFLG FG+HR+Y GKW++ IIY  TGGLFL+GVLYDFW
Sbjct: 66  DREADLRFQSGRIDYNIAWILLTFLGVFGLHRLYQGKWITAIIYFFTGGLFLVGVLYDFW 125

Query: 133 TLNTQISERNHASG 146
           TLN+Q+SERN   G
Sbjct: 126 TLNSQVSERNAGRG 139


>gb|ADR62433.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 139

 Score =  223 bits (568), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 103/134 (76%), Positives = 119/134 (88%)

Query: 13  SGIPVHDTHSKTIGYLLWIFGFTGAHRFYYGKPLTGTIWFFTLGLLGIGWIIDLFLIPAM 72
            G P HDTHSKTIGYLLWIFGFTG+HRFYYG+P+TGTIWFFTLGLLGIGW+IDLFLIP+M
Sbjct: 6   QGAPFHDTHSKTIGYLLWIFGFTGSHRFYYGRPITGTIWFFTLGLLGIGWLIDLFLIPSM 65

Query: 73  DREADQRFSGGAINYSVAWLLLTFLGFFGVHRMYMGKWVSGIIYLCTGGLFLIGVLYDFW 132
           DREAD RF  G I+Y++AW+LLTFLG FG+HR+Y GKW++ IIY  TGGLFL+GVLYDFW
Sbjct: 66  DREADLRFQSGRIDYNIAWILLTFLGVFGLHRLYQGKWITAIIYFFTGGLFLVGVLYDFW 125

Query: 133 TLNTQISERNHASG 146
           TLN+Q+SERN   G
Sbjct: 126 TLNSQVSERNAGRG 139