BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0175.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774049.1| chemotaxis histidine kinase [Herbaspirillum ... 308 4e-82 ref|ZP_03698252.1| CheA signal transduction histidine kinase [Lu... 230 1e-58 ref|ZP_08178822.1| chemotaxis protein histidine kinase-like prot... 229 2e-58 ref|YP_004846749.1| CheA signal transduction histidine kinase [P... 229 3e-58 ref|YP_001143003.1| chemotaxis protein CheA [Aeromonas salmonici... 228 4e-58 >ref|YP_003774049.1| chemotaxis histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ62141.1| chemotaxis histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 725 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 150/207 (72%), Positives = 173/207 (83%) Query: 1 LSEREIFRLIFEPGFSTAEQVTSLSGRGVGMDVVKRNIDALQGEVEIYSNPGQGTMVCIR 60 LS+ EI+R +FEPGFSTA QVT LSGRGVGMDVV+RNI+AL GEV I + G+GT+V +R Sbjct: 513 LSDAEIYRFVFEPGFSTARQVTELSGRGVGMDVVRRNIEALHGEVSIDTGRGRGTVVRLR 572 Query: 61 LPLTLAIIAGFQVVVGGAVFVIPLDLVVECINLSSHQVHNNVVTLRDEPLPFIPLRELFD 120 LPLTLAII+GFQVVVG AVFVIPLD+VVECI++ Q +++V +RDEPLPF+PLRELFD Sbjct: 573 LPLTLAIISGFQVVVGNAVFVIPLDMVVECIDMPPQQPGSHIVNVRDEPLPFVPLRELFD 632 Query: 121 LPQRESSRKSLVIVQYGPLRAGLLVDNLLGECQAVIKPLGKLFSKVKGLSGSTILGDGRV 180 LP RE R SLVIVQYGPLRAGLLVD LLGECQAVIKPLG+LF KVKGLSGSTILGDGRV Sbjct: 633 LPARERGRNSLVIVQYGPLRAGLLVDGLLGECQAVIKPLGRLFGKVKGLSGSTILGDGRV 692 Query: 181 ALILDVPHLIAHTGRMEQAEVRRAENR 207 ALILD+ HL+ HT + EQ + R Sbjct: 693 ALILDIAHLVHHTQQQEQGSAQAYAER 719 >ref|ZP_03698252.1| CheA signal transduction histidine kinase [Lutiella nitroferrum 2002] gb|EEG08994.1| CheA signal transduction histidine kinase [Lutiella nitroferrum 2002] Length = 722 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/200 (59%), Positives = 147/200 (73%) Query: 1 LSEREIFRLIFEPGFSTAEQVTSLSGRGVGMDVVKRNIDALQGEVEIYSNPGQGTMVCIR 60 LSE EI LIFEPGFSTA+ V+SLSGRGVGMDVVKRNI +L+G V++ S PG GT IR Sbjct: 516 LSEAEIDNLIFEPGFSTADHVSSLSGRGVGMDVVKRNIQSLRGHVDVRSAPGAGTRFSIR 575 Query: 61 LPLTLAIIAGFQVVVGGAVFVIPLDLVVECINLSSHQVHNNVVTLRDEPLPFIPLRELFD 120 LPLT+AII GF V G A +V+PLD+VVEC+ LS N+ + LR E LPFI L ELF+ Sbjct: 576 LPLTMAIIDGFLVGTGQANYVVPLDMVVECLELSPQTSDNHYLNLRGEVLPFIRLHELFN 635 Query: 121 LPQRESSRKSLVIVQYGPLRAGLLVDNLLGECQAVIKPLGKLFSKVKGLSGSTILGDGRV 180 LP + +R+++V+V+ G + G++VD LLGE Q VIKPLG LF ++G+ GSTILG G V Sbjct: 636 LPGKRPARENVVVVRTGAQKVGIVVDQLLGEFQTVIKPLGHLFQSLRGIGGSTILGSGEV 695 Query: 181 ALILDVPHLIAHTGRMEQAE 200 ALILDVP L+A R E E Sbjct: 696 ALILDVPALVAIATRRESRE 715 >ref|ZP_08178822.1| chemotaxis protein histidine kinase-like protein [Xanthomonas vesicatoria ATCC 35937] gb|EGD08959.1| chemotaxis protein histidine kinase-like protein [Xanthomonas vesicatoria ATCC 35937] Length = 669 Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 1/190 (0%) Query: 1 LSEREIFRLIFEPGFSTAEQVTSLSGRGVGMDVVKRNIDALQGEVEIYSNPGQGTMVCIR 60 LS+RE+F +IFEPGFSTAE+VT+LSGRGVGMDVVKRNI AL+G VEI S G GT + +R Sbjct: 469 LSDREVFAMIFEPGFSTAEKVTNLSGRGVGMDVVKRNITALRGTVEIDSAAGLGTTISVR 528 Query: 61 LPLTLAIIAGFQVVVGGAVFVIPLDLVVECINLSSHQVHNNVVTLRDEPLPFIPLRELFD 120 LPLTLAII GFQV VG +VFV+PLD+V EC+ + + ++ + LR LP++ LRELF Sbjct: 529 LPLTLAIINGFQVGVGKSVFVVPLDVVEECVEFAP-EYASDYIDLRGSVLPYVRLRELFA 587 Query: 121 LPQRESSRKSLVIVQYGPLRAGLLVDNLLGECQAVIKPLGKLFSKVKGLSGSTILGDGRV 180 L R +R+S+V+++ G R GL+VD LLGE Q VIKPL K+F++VKG+SGS+ILG G V Sbjct: 588 LGGRTPARESIVVIRQGAQRFGLVVDTLLGEWQTVIKPLSKVFAQVKGISGSSILGSGDV 647 Query: 181 ALILDVPHLI 190 ALILDVP LI Sbjct: 648 ALILDVPSLI 657 >ref|YP_004846749.1| CheA signal transduction histidine kinase [Pseudogulbenkiania sp. NH8B] dbj|BAK76335.1| CheA signal transduction histidine kinase [Pseudogulbenkiania sp. NH8B] Length = 722 Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 118/200 (59%), Positives = 147/200 (73%) Query: 1 LSEREIFRLIFEPGFSTAEQVTSLSGRGVGMDVVKRNIDALQGEVEIYSNPGQGTMVCIR 60 LSE EI LIFEPGFSTA+ V++LSGRGVGMDVVKRNI +L+G V++ S PG GT IR Sbjct: 516 LSEAEIDNLIFEPGFSTADHVSNLSGRGVGMDVVKRNIQSLRGHVDVRSAPGAGTRFSIR 575 Query: 61 LPLTLAIIAGFQVVVGGAVFVIPLDLVVECINLSSHQVHNNVVTLRDEPLPFIPLRELFD 120 LPLT+AII GF V G A +V+PLD+VVEC+ LS N+ + LR E LPFI L ELF+ Sbjct: 576 LPLTMAIIDGFLVGTGQANYVVPLDMVVECLELSPQTSDNHYLNLRGEVLPFIRLHELFN 635 Query: 121 LPQRESSRKSLVIVQYGPLRAGLLVDNLLGECQAVIKPLGKLFSKVKGLSGSTILGDGRV 180 LP + +R+++V+V+ G + G++VD LLGE Q VIKPLG LF ++G+ GSTILG G V Sbjct: 636 LPGKRPARENVVVVRTGAQKVGIVVDQLLGEFQTVIKPLGHLFQSLRGIGGSTILGSGEV 695 Query: 181 ALILDVPHLIAHTGRMEQAE 200 ALILDVP L+A R E E Sbjct: 696 ALILDVPALVAIATRRESRE 715 >ref|YP_001143003.1| chemotaxis protein CheA [Aeromonas salmonicida subsp. salmonicida A449] gb|ABO91255.1| chemotaxis protein CheA [Aeromonas salmonicida subsp. salmonicida A449] Length = 737 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 120/219 (54%), Positives = 157/219 (71%), Gaps = 9/219 (4%) Query: 1 LSEREIFRLIFEPGFSTAEQVTSLSGRGVGMDVVKRNIDALQGEVEIYSNPGQGTMVCIR 60 L+++EI++LIFE GFSTAE VT+LSGRGVGMDVVKRNI AL+G VE+ S PGQGT V IR Sbjct: 518 LTDQEIYQLIFEAGFSTAEAVTNLSGRGVGMDVVKRNITALRGSVELDSKPGQGTRVQIR 577 Query: 61 LPLTLAIIAGFQVVVGGAVFVIPLDLVVECINLSSHQVHN----NVVTLRDEPLPFIPLR 116 LPLTLAII GF V V +VIPLD+V+EC+ L+ + + N + LR E LPF+ L+ Sbjct: 578 LPLTLAIIDGFLVRVSTTHYVIPLDMVIECVELTQSALDDTQGRNYINLRGEVLPFVRLQ 637 Query: 117 ELFDLPQRESSRKSLVIVQYGPLRAGLLVDNLLGECQAVIKPLGKLFSKVKGLSGSTILG 176 FD+ R+++V+V +G ++GL+VD LLGE Q VIKPLGKLF +++G+SGSTILG Sbjct: 638 HYFDVEGARGRRENIVVVSHGGKKSGLVVDELLGEFQTVIKPLGKLFQRLQGISGSTILG 697 Query: 177 DGRVALILDVPHLIAHT-----GRMEQAEVRRAENRMSA 210 G VALILD+P LI H G++ Q + R + + A Sbjct: 698 GGEVALILDIPSLIQHAIDQELGQLSQYAIPRMQTQPRA 736