BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0161.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754489.1| putative permease [Collimonas fungivorans Te... 485 e-135 ref|YP_003774059.1| permease [Herbaspirillum seropedicae SmR1] >... 458 e-127 ref|ZP_04577360.1| permease [Oxalobacter formigenes HOxBLS] >gi|... 399 e-109 ref|ZP_04579512.1| predicted protein [Oxalobacter formigenes OXC... 384 e-104 gb|AEG68180.1| permease transmembrane transport protein [Ralston... 375 e-102 >ref|YP_004754489.1| putative permease [Collimonas fungivorans Ter331] gb|AEK63666.1| Putative permease often clustered with de novo purine synthesis [Collimonas fungivorans Ter331] Length = 360 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 248/329 (75%), Positives = 291/329 (88%) Query: 1 MLTPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVL 60 +LTPF+ +AILAYALNPGVDWL+RRRIG F PR LAVL+V+LLL+ A LA++L+VVPVL Sbjct: 32 ILTPFIASAILAYALNPGVDWLSRRRIGKFPFPRALAVLVVILLLVFAILAVILIVVPVL 91 Query: 61 VKEIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVL 120 KE PLLQ QIPNFL+KL+ + P L +FGI+VRLD TGIK +LT+QL+TSGDEIW SVL Sbjct: 92 RKEFPLLQDQIPNFLNKLDGLIGPHLQDFGINVRLDGTGIKEMLTKQLSTSGDEIWTSVL 151 Query: 121 ASAKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDL 180 AS K+GGTA+L W A +L +P+VLFYLLQDWH ++RL ++PRRW GK MT+EVD L Sbjct: 152 ASVKVGGTAVLGWLATILLVPVVLFYLLQDWHSIVERLGRLVPRRWQGKTGNMTQEVDSL 211 Query: 181 LAQYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAA 240 LAQYLRGQLLVML+LA YYS LAIAGFD+ALPVGI+TGLLVFIPYVGFGLGLVLALIAA Sbjct: 212 LAQYLRGQLLVMLVLAIYYSTGLAIAGFDVALPVGIITGLLVFIPYVGFGLGLVLALIAA 271 Query: 241 VLQFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGV 300 +LQF+G +GL+AVAI+YGIGQVLESFILTP+LVGERIGLHPL+VIFAL+AFGQLFGFVG+ Sbjct: 272 MLQFSGWHGLIAVAIVYGIGQVLESFILTPRLVGERIGLHPLVVIFALMAFGQLFGFVGI 331 Query: 301 LLALPASAIMSVVVRHLRQHYLSSSFYNS 329 LLALP SAIMSVVV+H+R HYLSSSFYN+ Sbjct: 332 LLALPCSAIMSVVVKHVRAHYLSSSFYNT 360 >ref|YP_003774059.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ62151.1| permease transmembrane transport protein [Herbaspirillum seropedicae SmR1] Length = 360 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 244/328 (74%), Positives = 289/328 (88%) Query: 1 MLTPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVL 60 ML+PFV A I+ YALNPGVDW+A RR+GP +PR +AV I+VLLL+LAGLALVL+VVP++ Sbjct: 32 MLSPFVAAGIIGYALNPGVDWIASRRLGPVRVPRFVAVTIMVLLLILAGLALVLIVVPLV 91 Query: 61 VKEIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVL 120 +++IPLLQ Q+P LDKLNA V+PRL + GI VRLD+ GIK +LTQQ++TS DE+W SVL Sbjct: 92 LRQIPLLQAQVPPLLDKLNAFVSPRLHQLGIDVRLDLAGIKSLLTQQISTSSDEVWTSVL 151 Query: 121 ASAKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDL 180 ASAK+GGTALLTW ANLLF+PMVLFYLLQDWH FIKR++ +IPRRW G+I+ M EVD L Sbjct: 152 ASAKVGGTALLTWLANLLFVPMVLFYLLQDWHQFIKRMQILIPRRWAGRINTMAAEVDGL 211 Query: 181 LAQYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAA 240 L QYLRGQLLVML+LA YYSVAL AGFD ALPVG+LTGLLVFIPYVGFGLGLVLA++AA Sbjct: 212 LGQYLRGQLLVMLVLAVYYSVALTAAGFDSALPVGVLTGLLVFIPYVGFGLGLVLAILAA 271 Query: 241 VLQFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGV 300 +LQF G GL+ VA+IYG+GQVLESFILTP+LVGERIGLHPL+VIFALLAFGQLFGFVGV Sbjct: 272 ILQFDGAIGLLWVALIYGVGQVLESFILTPKLVGERIGLHPLVVIFALLAFGQLFGFVGV 331 Query: 301 LLALPASAIMSVVVRHLRQHYLSSSFYN 328 LLALPASAI+SV+ H+R+ YL+S+FYN Sbjct: 332 LLALPASAIVSVIALHVRREYLASNFYN 359 >ref|ZP_04577360.1| permease [Oxalobacter formigenes HOxBLS] gb|EEO28322.1| permease [Oxalobacter formigenes HOxBLS] Length = 359 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/327 (58%), Positives = 256/327 (78%) Query: 3 TPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLVK 62 TPF+ AILAYALNP VDWL +RIG LPR++AV+IV+LLL+ A L+++P+L++ Sbjct: 33 TPFIAGAILAYALNPIVDWLRSKRIGTLRLPRLIAVIIVMLLLIAIVTAFALIMIPMLIR 92 Query: 63 EIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLAS 122 E P+L +QIP F+ K+N ++P L+E GI + D GIK+ILT+Q GD +W S++AS Sbjct: 93 EWPMLYEQIPAFIAKVNNYLSPILNELGIQIPADNAGIKKILTEQFVPKGDGVWKSLIAS 152 Query: 123 AKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLLA 182 AK GGTA+LTWA NL+ IP+VLFYLL+DWH +++LR MIPRRWV + + + EV+ +LA Sbjct: 153 AKFGGTAVLTWAWNLILIPVVLFYLLKDWHIMMRKLRDMIPRRWVTRAVSFSREVNSMLA 212 Query: 183 QYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAVL 242 QYLRGQLLVM+IL++YYS+ LA+AG+++ALPVGI+TG+L FIPY+G GL LA+ A +L Sbjct: 213 QYLRGQLLVMVILSSYYSITLALAGYNVALPVGIMTGMLAFIPYIGICFGLALAITATLL 272 Query: 243 QFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVLL 302 QFTG+ + + IIYG G + ++TP+LVG+RI LHPL+VIFALLAFGQLFGFVG+LL Sbjct: 273 QFTGMEAWITLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLIVIFALLAFGQLFGFVGILL 332 Query: 303 ALPASAIMSVVVRHLRQHYLSSSFYNS 329 ALP+SAI+SV +HLR +Y S+FY S Sbjct: 333 ALPSSAILSVAYKHLRNYYFDSNFYKS 359 >ref|ZP_04579512.1| predicted protein [Oxalobacter formigenes OXCC13] gb|EEO30485.1| predicted protein [Oxalobacter formigenes OXCC13] Length = 359 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 188/327 (57%), Positives = 249/327 (76%) Query: 3 TPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLVK 62 TPF+ AILAYALNP VDWL RIG F +PR+ +V+IVVL L+ L+++P+L+K Sbjct: 33 TPFIAGAILAYALNPVVDWLRSLRIGSFRIPRLASVVIVVLFLISLVTTFALIMIPMLLK 92 Query: 63 EIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLAS 122 E P+L +QIP F+ K++ + P L+E GI + +D G+K+ILT+Q GD +W S++AS Sbjct: 93 EWPILYEQIPAFVAKVSNHLNPVLNEIGIQMPVDNAGVKKILTEQFFPKGDGVWKSLIAS 152 Query: 123 AKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLLA 182 AK GGTA+LTWA NL+ IP+VLFYLL DWH ++LR MIPRRWVGK EV+ +LA Sbjct: 153 AKFGGTAVLTWAWNLILIPVVLFYLLLDWHILTRKLRDMIPRRWVGKTIRFCHEVNTMLA 212 Query: 183 QYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAVL 242 QYLRGQLLVMLIL+ YYS+ALA+AG+++ALPVGI+TGL+ F+PY+G +GL LA+ A ++ Sbjct: 213 QYLRGQLLVMLILSIYYSLALALAGYNVALPVGIMTGLMAFVPYIGICIGLFLAITATLV 272 Query: 243 QFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVLL 302 QF+G+ V + IIYG G + ++TP+LVG+RI LHPL VIFALLAF QLFGFVG+LL Sbjct: 273 QFSGMEAWVTLGIIYGFGYSFDGLLMTPKLVGDRIQLHPLFVIFALLAFAQLFGFVGILL 332 Query: 303 ALPASAIMSVVVRHLRQHYLSSSFYNS 329 ALP+SAI+SV +HLR YL S+FY + Sbjct: 333 ALPSSAILSVAYKHLRALYLDSNFYKN 359 >gb|AEG68180.1| permease transmembrane transport protein [Ralstonia solanacearum Po82] Length = 356 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/328 (56%), Positives = 251/328 (76%), Gaps = 5/328 (1%) Query: 2 LTPFVTAAILAYALNPGVDWLARRRIGPFLLPRVLAVLIVVLLLLLAGLALVLVVVPVLV 61 LTPFV A IL+Y L+PGV+WL R R+ PRVL V ++VLLL + +AL+L+++ VL Sbjct: 34 LTPFVFAFILSYILHPGVEWLQRHRV-----PRVLGVFLMVLLLAVMAVALMLLILAVLQ 88 Query: 62 KEIPLLQQQIPNFLDKLNAKVAPRLSEFGIHVRLDITGIKRILTQQLATSGDEIWASVLA 121 +EIP +++Q+P L KLNA V PRL+E G+HVR D G++++LT+QLA+S +++ ++ L Sbjct: 89 REIPAIREQLPGMLSKLNAAVTPRLAEMGVHVRFDFPGLRKLLTEQLASSPEDVMSTALN 148 Query: 122 SAKIGGTALLTWAANLLFIPMVLFYLLQDWHPFIKRLRGMIPRRWVGKISAMTEEVDDLL 181 ++ G+A + + +P+V+FYLL DW+ ++RL G++PR W+GK + E D LL Sbjct: 149 YLRVSGSAAVQLLGIVFLVPIVMFYLLMDWNMLMRRLEGVVPRHWIGKTRELATETDGLL 208 Query: 182 AQYLRGQLLVMLILATYYSVALAIAGFDIALPVGILTGLLVFIPYVGFGLGLVLALIAAV 241 +QYLRGQ++VML+LA YYS LA+AGFD+ALP+GI TGL VFIPY+GFG+GL LA+++A+ Sbjct: 209 SQYLRGQIIVMLVLAVYYSSGLALAGFDVALPIGIFTGLAVFIPYIGFGIGLTLAILSAL 268 Query: 242 LQFTGLYGLVAVAIIYGIGQVLESFILTPQLVGERIGLHPLMVIFALLAFGQLFGFVGVL 301 LQF LYGL+AVA++YGIGQVLE F LTP+LVGERIGLHPL VI ALLAFGQLFGF G+L Sbjct: 269 LQFGNLYGLLAVAVVYGIGQVLEGFYLTPRLVGERIGLHPLAVILALLAFGQLFGFFGIL 328 Query: 302 LALPASAIMSVVVRHLRQHYLSSSFYNS 329 LALP SA++ V +R +RQ YL S Y Sbjct: 329 LALPISAVLLVGLRQIRQLYLGSKLYRD 356