BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0144.p         (131 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774073.1| two component response regulator protein [He...   224   3e-57
ref|YP_001100873.1| OmpR family response regulator [Herminiimona...   212   2e-53
ref|YP_004754468.1| response regulators consisting of a CheY-lik...   210   7e-53
ref|YP_001354553.1| two-components system response regulator [Ja...   209   8e-53
ref|ZP_08273335.1| Response regulators consisting of a CheY-like...   208   2e-52

>ref|YP_003774073.1| two component response regulator protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ62165.1| two component response regulator protein [Herbaspirillum
           seropedicae SmR1]
          Length = 237

 Score =  224 bits (571), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 115/117 (98%), Positives = 115/117 (98%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRA  R
Sbjct: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRALTR 117


>ref|YP_001100873.1| OmpR family response regulator [Herminiimonas arsenicoxydans]
 emb|CAL62752.1| Transcriptional regulatory protein TctD [Herminiimonas
           arsenicoxydans]
          Length = 233

 Score =  212 bits (539), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/117 (91%), Positives = 111/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGY  DCVKNGVEADSALSTQDFDLLILDLGLPKMSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYVTDCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRA  R
Sbjct: 61  EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTR 117


>ref|YP_004754468.1| response regulators consisting of a CheY-like receiver
           domain-containing protein and a winged-helix DNA-binding
           domain-containing protein [Collimonas fungivorans
           Ter331]
 gb|AEK63645.1| Response regulators consisting of a CheY-like receiver domain
           protein and a winged-helix DNA-binding domain protein
           [Collimonas fungivorans Ter331]
          Length = 247

 Score =  210 bits (534), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 107/117 (91%), Positives = 111/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGYA DCV NG+EADSALSTQDFDLLILDLGLPKM+GL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYATDCVMNGMEADSALSTQDFDLLILDLGLPKMTGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVLRRLRARNSRLPVLILTAADS+EQRV+GLDLGADDYMAKPF LSELEARVRA  R
Sbjct: 61  EVLRRLRARNSRLPVLILTAADSLEQRVKGLDLGADDYMAKPFELSELEARVRALTR 117


>ref|YP_001354553.1| two-components system response regulator [Janthinobacterium sp.
           Marseille]
 gb|ABR89837.1| two-components system response regulator [Janthinobacterium sp.
           Marseille]
          Length = 233

 Score =  209 bits (533), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 106/117 (90%), Positives = 110/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGYA DCVKNG EADS LSTQDFDLLILDLGLPKMSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYATDCVKNGAEADSVLSTQDFDLLILDLGLPKMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVL+RLRARNSRLPVLILTA DS+EQRV+GLDLGADD+MAKPFALSELEARVRA  R
Sbjct: 61  EVLQRLRARNSRLPVLILTAGDSIEQRVKGLDLGADDFMAKPFALSELEARVRALTR 117


>ref|ZP_08273335.1| Response regulators consisting of a CheY-like receiver domain and a
           winged-helix DNA-binding domain [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF33207.1| Response regulators consisting of a CheY-like receiver domain and a
           winged-helix DNA-binding domain [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 228

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/117 (90%), Positives = 110/117 (94%)

Query: 1   MRILLAEDDSVLADGLTRSLRHSGYAADCVKNGVEADSALSTQDFDLLILDLGLPKMSGL 60
           MRILLAEDDSVLADGLTRSLR SGYA DCV NGVEAD ALSTQDFDLLILDLGLP+MSGL
Sbjct: 1   MRILLAEDDSVLADGLTRSLRQSGYATDCVHNGVEADLALSTQDFDLLILDLGLPRMSGL 60

Query: 61  EVLRRLRARNSRLPVLILTAADSVEQRVQGLDLGADDYMAKPFALSELEARVRARAR 117
           EVLR+LRARNS LPVLILTAADS+EQRV+GLDLGADDYMAKPFALSELEARVRA  R
Sbjct: 61  EVLRKLRARNSHLPVLILTAADSIEQRVKGLDLGADDYMAKPFALSELEARVRALTR 117