BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0142.p (236 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751301.1| hypothetical protein CFU_0642 [Collimonas fu... 105 6e-21 ref|YP_001101090.1| hypothetical protein HEAR2855 [Herminiimonas... 103 2e-20 ref|YP_004754467.1| hypothetical protein CFU_3820 [Collimonas fu... 102 7e-20 ref|YP_003777283.1| transmembrane protein [Herbaspirillum serope... 100 3e-19 ref|YP_001354800.1| hypothetical protein mma_3110 [Janthinobacte... 94 2e-17 >ref|YP_004751301.1| hypothetical protein CFU_0642 [Collimonas fungivorans Ter331] gb|AEK60478.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 309 Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 89/175 (50%), Positives = 113/175 (64%), Gaps = 20/175 (11%) Query: 1 MKKVFVALIVAAMTLAIGVTSV---EAKRLGGGGSIGKQSSGASRQAQSPMQQN--QAAA 55 MK+ + L++ A TL++ + ++ +A+RLGGGGS GKQSSG SRQA S QN A Sbjct: 1 MKRFLLVLLMVATTLSLTMLTISNADARRLGGGGSFGKQSSGISRQAPSQPTQNFGNANQ 60 Query: 56 AKPAAPAAAPAAAAPKP-SPWKGILGGALLGLGLGALLSHFGLGGAMASMISTILMVALL 114 A+PA PAA P PKP SPWKGILGGALLGLGLGAL+SHFG+GGA S LM+ALL Sbjct: 61 ARPATPAATPQGVPPKPASPWKGILGGALLGLGLGALMSHFGMGGAFGS----FLMMALL 116 Query: 115 AFAAMFIYRMFRRKSEANSNSNERPAY-------AANQGDFSNQTPAIGSQLEAG 162 A A +F+ R+ RKS SN+ AY A+ + S TP IGS++ +G Sbjct: 117 AVAVIFVVRLLMRKS---SNTPAPAAYSGANSPAASFDSNSSGFTPEIGSRINSG 168 >ref|YP_001101090.1| hypothetical protein HEAR2855 [Herminiimonas arsenicoxydans] emb|CAL62969.1| conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 315 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/174 (54%), Positives = 114/174 (65%), Gaps = 8/174 (4%) Query: 1 MKKVFVALIVAAMTLAIGVTSVEAKRLGGGGSIGKQSSGASRQAQSPMQQNQAAAAKPAA 60 MKK+ +AL+V A ++ + VEAKR+GGGGS GKQS R A P Q A A Sbjct: 1 MKKLLMALVVVASSMTLIAPQVEAKRMGGGGSFGKQSQSFKR-AAPPQQSATPAKPAAAP 59 Query: 61 PAAAPAAAAPKPSPWKGILGGALLGLGLGALLSHFGLGGAMASMISTILMVALLAFAAMF 120 AA A AA KPS + ILGGALLGLGLGALLSH G+GGA+ASMIST+LMV L AFAAMF Sbjct: 60 AAAGAAGAAAKPSMMRNILGGALLGLGLGALLSHLGIGGALASMISTMLMVGLFAFAAMF 119 Query: 121 IYRMFRRKSEANSNSNER----PAYAANQGDFSNQTPAIGSQLEA--GQPKALQ 168 IYRM + KS N+R P++ N + S+ TP IGS++E GQP ALQ Sbjct: 120 IYRMIKAKSAGAQAGNQRNGLQPSFPNNFSEKSS-TPEIGSRIEQPYGQPSALQ 172 >ref|YP_004754467.1| hypothetical protein CFU_3820 [Collimonas fungivorans Ter331] gb|AEK63644.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 315 Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 4/162 (2%) Query: 1 MKKVFVALIVAAMTLAIGVTSVEAKRLGGGGSIGKQSSGASRQAQSPMQQNQAAAAKPAA 60 MKK+FVALIV AMTL+ G+++VEAKR+GGGGS GK+S +RQA Q AA AA Sbjct: 1 MKKLFVALIVVAMTLSAGISTVEAKRMGGGGSFGKKSQSMNRQAAPAQNQASNAAKPVAA 60 Query: 61 PAAAPAAAAPKPSPWKGILGGALLGLGLGALLSHFGLGGAMASMISTILMVALLAFAAMF 120 AA AAAA KPS WKG+LGGALLGLGLGALLS GLGGAMA MIS I+M+AL AFAAMF Sbjct: 61 AAAPAAAAAAKPSMWKGMLGGALLGLGLGALLSSMGLGGAMAGMISNIIMIALFAFAAMF 120 Query: 121 IYRMFRRK--SEANSNSNERPAYAANQGDFSNQTPAIGSQLE 160 IY++ RRK + A N+ RPA+AA S+ TP I S+LE Sbjct: 121 IYKLVRRKMGNGAAGNNGMRPAFAAQAP--SSFTPEIASRLE 160 >ref|YP_003777283.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65375.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 317 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/163 (49%), Positives = 100/163 (61%), Gaps = 15/163 (9%) Query: 23 EAKRLGGGGSIGKQSSGASRQAQSPMQQNQAAAAKPAAPA--AAPAAAAPKP---SPWKG 77 EAKRLGGGGS GKQSS SRQA +A P P+ AA +AP P SPW+ Sbjct: 23 EAKRLGGGGSFGKQSSNYSRQAAPSSPSYSQPSATPYRPSTPAATLQSAPMPKPASPWRN 82 Query: 78 ILGGALLGLGLGALLSHFGLGGAMASMISTILMVALLAFAAMFIYRMFRRKSEANSNSNE 137 +LGGALLG GLGAL+SHFG+GGAM ++ ++L +ALL A +F+ RMF R EA +N+ Sbjct: 83 VLGGALLGFGLGALMSHFGIGGAMGGLLGSLLTIALLCAAVIFLIRMFARGREAQNNN-- 140 Query: 138 RPAYAANQ------GDFSNQTPAIGSQL-EAGQPKALQGNTFG 173 PAYA G + TP IGS L + P ALQGN +G Sbjct: 141 -PAYATPMPGVSPIGSAAGATPEIGSGLRDINPPPALQGNAYG 182 >ref|YP_001354800.1| hypothetical protein mma_3110 [Janthinobacterium sp. Marseille] gb|ABR90330.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 307 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 94/173 (54%), Positives = 110/173 (63%), Gaps = 11/173 (6%) Query: 1 MKKVFVALIVAAMTLAIGVTSVEAKRLGGGGSIGKQSSGASRQAQSPMQQNQAAAAKPAA 60 MKK+ +A+ V ++ EAKR+GGGGS GKQS R A P Q + A A+KPAA Sbjct: 1 MKKLLLAVAVMVSSMTFIAVEAEAKRMGGGGSFGKQSQSFQRPA--PAQSSSANASKPAA 58 Query: 61 PAAAPAAAAPKPSP---WKGILGGALLGLGLGALLSHFGLGGAMASMISTILMVALLAFA 117 AA A A + + ILGGALLGLGLGALLSH G+GGA ASMISTILMVALL FA Sbjct: 59 APAAAGAGAAAAAKPSMMRNILGGALLGLGLGALLSHLGIGGAFASMISTILMVALLGFA 118 Query: 118 AMFIYRMFRRKSEANSNSNERPAYAANQGDFSNQTPAIGSQL--EAGQPKALQ 168 AMFIYRM + KS N N +P++ AN N TP IGS L + QP ALQ Sbjct: 119 AMFIYRMIKNKSAGN---NAQPSF-ANGYSAKNSTPDIGSGLNQQYQQPSALQ 167