BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0141.p         (39 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBJ36444.1| putative two component response regulator transc...    72   4e-11
ref|NP_521282.1| two component response regulator transcription ...    71   6e-11
ref|ZP_00946815.1| Transcriptional regulatory protein [Ralstonia...    71   7e-11
gb|AEG67607.1| response regulator protein [Ralstonia solanacearu...    70   8e-11
ref|YP_003744224.1| two component response regulator transcripti...    70   8e-11

>emb|CBJ36444.1| putative two component response regulator transcription regulator
           protein [Ralstonia solanacearum CMR15]
          Length = 234

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 36/39 (92%)

Query: 1   MQLSPFTVRTFVRRIYSKLKVTSKTEAIYEARTLGLLPD 39
           M+LS FTVRTFVRRIYSKLKVTSK EAIYEARTLGLL D
Sbjct: 196 MELSHFTVRTFVRRIYSKLKVTSKAEAIYEARTLGLLDD 234


>ref|NP_521282.1| two component response regulator transcription regulator protein
           [Ralstonia solanacearum GMI1000]
 emb|CAD16949.1| probable two component response regulator transcription regulator
           protein [Ralstonia solanacearum GMI1000]
          Length = 231

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 35/39 (89%)

Query: 1   MQLSPFTVRTFVRRIYSKLKVTSKTEAIYEARTLGLLPD 39
           M LS FTVRTFVRRIYSKLKVTSK EAIYEARTLGLL D
Sbjct: 193 MALSHFTVRTFVRRIYSKLKVTSKAEAIYEARTLGLLSD 231


>ref|ZP_00946815.1| Transcriptional regulatory protein [Ralstonia solanacearum UW551]
 ref|YP_002261098.1| two component response regulator protein [Ralstonia solanacearum
           IPO1609]
 gb|EAP70692.1| Transcriptional regulatory protein [Ralstonia solanacearum UW551]
 emb|CAQ63040.1| two component response regulator protein [Ralstonia solanacearum
           IPO1609]
          Length = 232

 Score = 70.9 bits (172), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 35/39 (89%)

Query: 1   MQLSPFTVRTFVRRIYSKLKVTSKTEAIYEARTLGLLPD 39
           M LS FTVRTFVRRIYSKLKVTSK EAIYEARTLGLL D
Sbjct: 194 MALSHFTVRTFVRRIYSKLKVTSKAEAIYEARTLGLLAD 232


>gb|AEG67607.1| response regulator protein [Ralstonia solanacearum Po82]
          Length = 232

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 35/39 (89%)

Query: 1   MQLSPFTVRTFVRRIYSKLKVTSKTEAIYEARTLGLLPD 39
           M LS FTVRTFVRRIYSKLKVTSK EAIYEARTLGLL D
Sbjct: 194 MALSHFTVRTFVRRIYSKLKVTSKAEAIYEARTLGLLAD 232


>ref|YP_003744224.1| two component response regulator transcriptional regulator protein
           [Ralstonia solanacearum CFBP2957]
 emb|CBJ41577.1| putative two component response regulator transcription regulator
           protein [Ralstonia solanacearum CFBP2957]
          Length = 232

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/39 (89%), Positives = 35/39 (89%)

Query: 1   MQLSPFTVRTFVRRIYSKLKVTSKTEAIYEARTLGLLPD 39
           M LS FTVRTFVRRIYSKLKVTSK EAIYEARTLGLL D
Sbjct: 194 MALSHFTVRTFVRRIYSKLKVTSKAEAIYEARTLGLLAD 232