BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0131.p         (78 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774075.1| transmembrane protein [Herbaspirillum serope...   134   7e-30
ref|YP_004754467.1| hypothetical protein CFU_3820 [Collimonas fu...   113   8e-24
ref|YP_004751301.1| hypothetical protein CFU_0642 [Collimonas fu...   113   9e-24
ref|ZP_08274321.1| putative membrane protein [Oxalobacteraceae b...   112   2e-23
ref|YP_001354800.1| hypothetical protein mma_3110 [Janthinobacte...   109   1e-22

>ref|YP_003774075.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62167.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 242

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 61/77 (79%), Positives = 68/77 (88%)

Query: 1   MQLTERGASANHTDVVSLDADMLGVETVGNDYLASVKFFGFIKEDQNASPTQFNEIWNLS 60
           +Q+ ERGA++N TDVVSLDA++LGVETVGNDYLASVKFFGFIKED  ASP QF EIWNLS
Sbjct: 161 LQIQERGAASNQTDVVSLDAEVLGVETVGNDYLASVKFFGFIKEDPTASPAQFAEIWNLS 220

Query: 61  KPVTGNGGWVLAGIQQL 77
           KP  G GGWVLAGIQQ+
Sbjct: 221 KPAAGQGGWVLAGIQQI 237


>ref|YP_004754467.1| hypothetical protein CFU_3820 [Collimonas fungivorans Ter331]
 gb|AEK63644.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 315

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 61/77 (79%)

Query: 1   MQLTERGASANHTDVVSLDADMLGVETVGNDYLASVKFFGFIKEDQNASPTQFNEIWNLS 60
           MQL ERGAS NHTDVVSLDA++LG+ET   +YLASVKF G IKED  A    F+E+WNLS
Sbjct: 235 MQLQERGASDNHTDVVSLDAELLGIETADAEYLASVKFTGMIKEDDAAFAAPFSEVWNLS 294

Query: 61  KPVTGNGGWVLAGIQQL 77
           KP  G GGW+LAGI+Q+
Sbjct: 295 KPTAGQGGWILAGIEQV 311


>ref|YP_004751301.1| hypothetical protein CFU_0642 [Collimonas fungivorans Ter331]
 gb|AEK60478.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 309

 Score =  113 bits (283), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 62/77 (80%)

Query: 1   MQLTERGASANHTDVVSLDADMLGVETVGNDYLASVKFFGFIKEDQNASPTQFNEIWNLS 60
           +QL ERGAS N+TDVV LD +++G+ET+G+DYLASVKF G IKE   AS   F E+WNLS
Sbjct: 231 LQLQERGASPNNTDVVQLDGELMGIETIGSDYLASVKFTGLIKEVPEASAEPFTEVWNLS 290

Query: 61  KPVTGNGGWVLAGIQQL 77
           KP TG GGWVLAGIQQ+
Sbjct: 291 KPQTGQGGWVLAGIQQI 307


>ref|ZP_08274321.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32182.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 209

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/78 (67%), Positives = 62/78 (79%)

Query: 1   MQLTERGASANHTDVVSLDADMLGVETVGNDYLASVKFFGFIKEDQNASPTQFNEIWNLS 60
           +Q+ ERGAS N+TDVV LDA++LGVETVG DYLASVKF G IKE ++A    F E WNLS
Sbjct: 132 LQIQERGASPNNTDVVKLDAELLGVETVGGDYLASVKFSGMIKESESAPAEPFAEAWNLS 191

Query: 61  KPVTGNGGWVLAGIQQLS 78
           K  +G GGW+LAGIQQLS
Sbjct: 192 KSTSGQGGWILAGIQQLS 209


>ref|YP_001354800.1| hypothetical protein mma_3110 [Janthinobacterium sp. Marseille]
 gb|ABR90330.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 307

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 61/77 (79%)

Query: 1   MQLTERGASANHTDVVSLDADMLGVETVGNDYLASVKFFGFIKEDQNASPTQFNEIWNLS 60
           +QL ERGA+ N TDVV+L+ +  GVETVGNDY+AS+KF G I+E  +A    F+E WNLS
Sbjct: 230 LQLQERGATPNVTDVVTLNGEFYGVETVGNDYIASIKFTGMIREADHAPTEPFSEAWNLS 289

Query: 61  KPVTGNGGWVLAGIQQL 77
           KPV GNGGWVLAGIQQL
Sbjct: 290 KPVNGNGGWVLAGIQQL 306